Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g02659 ATGGATGCTACCACAACCTCTGAACTCCCCCCTGGCTTTAGGTTTCACCCAACGGACGAGGAACTAATCGTCTATTACCTTTGCAACCAAGCCACATCAAAGCCTTGCCCTGCTTCCATCATCCCAGAAGTGGATCTCTACAAGTTTGATCCATGGGAATTGCCAGATAAAACAGAATTTGGAGAAAATGAATGGTATTTCTTTAGTCCACGAGACAGGAAGTACCCAAACGGGGTGAGGCCTAACCGAGCAACAGTGTCTGGGTATTGGAAGGCTACTGGCACAGACAAGGCAATCTATAGTGGATCTAAGCTTGTTGGGGTGAAGAAATCCCTAGTATTTTACAAGGGTAGGCCACCAAAGGGTGACAAGACTGATTGGATTATGCATGAGTACCGATTGGCAGAATCAAAACAACCAGTTAACAGGAAAATTGGGTCCATGAGGCTGGATGACTGGGTCCTGTGCAGAATTTATAAGAAGAAGAACATGGGAAAAACACTGGAGCACAAAGAGGCACACCCAAAAGTTCAAATGACTAATCTTATAGCTGCAAATAATGATGAACAGAAAATGATGAACCTTCCCAGGACTTGGTCCCTCACTTACCTTTTGGATATGAATTACTTGGGTCCTATTTTATCTGATGGCTCCTATTGCTCAACCTTTGATTTTCAAATTAGCAATGCCAATATTGGAATTGACCCCTTTGTAAATTCTCAACCGGTTGAAATGGCCAACAATTATGTAGCAGACTCGGGTAAGTACTAA 771 0.4319 MDATTTSELPPGFRFHPTDEELIVYYLCNQATSKPCPASIIPEVDLYKFDPWELPDKTEFGENEWYFFSPRDRKYPNGVRPNRATVSGYWKATGTDKAIYSGSKLVGVKKSLVFYKGRPPKGDKTDWIMHEYRLAESKQPVNRKIGSMRLDDWVLCRIYKKKNMGKTLEHKEAHPKVQMTNLIAANNDEQKMMNLPRTWSLTYLLDMNYLGPILSDGSYCSTFDFQISNANIGIDPFVNSQPVEMANNYVADSGKY* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g02659 256 Gene3D NAC domain 18 166 IPR036093 GO:0003677|GO:0006355
Phac2g02659 256 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 8 180 - -
Phac2g02659 256 ProSiteProfiles NAC domain profile. 9 161 IPR003441 GO:0003677|GO:0006355
Phac2g02659 256 FunFam NAC transcription factor 18 165 - -
Phac2g02659 256 Pfam No apical meristem (NAM) protein 10 134 IPR003441 GO:0003677|GO:0006355
Phac2g02659 256 SUPERFAMILY NAC domain 5 161 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g02659 Phac-Chr2 27817667 27819177 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g02659 1 224 NAC Transcription Factor Family AT1G69490 65.254 1.81e-109 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phac2g02659 NAM 6.3e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g02659 - - gmx:100785110 476.478