Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g02656 ATGGGCAGGTCACCATGCTGTGAAAAAGTGGGCTTGAAGAAAGGCCCTTGGACTCCCGAGGAGGACAAAAAGCTCATGGCTTACATAGAAGAGTTCGGTCACGGAAGCTGGCGTGCCTTGCCTTCCAAAGCTGGCCTTCAAAGATGTGGGAAGAGCTGCAGACTCAGGTGGACTAACTACCTTCGACCCGACATTAAAAGGGGAAAGTTCAGCTTGCAGGAAGAGCAAACAATCATTCAACTCCATGCCCTTCTTGGGAACAGATGGTCAGCTATAGCGGCTCAACTTCCGAAGAGGACAGACAATGAGATAAAGAACTACTGGAACACACACCTGAAGAAAAGGTTAACCAGAATGGGGATAGACCCCACCACCCACAAGCCCAAAACCGATGCGCTTGGTGGCTCCGGTGGTTGCCAATCCAAGGACGCAGCCAACCTCAGCCACATGGCGCAGTGGGAGAGTGCCCGTCTCGAAGCCGAAGCAAGGCTGGTGAGAGAGTCAAAGTTGCAAGTCCAGAACAACCTCGGATCCTGCTCCAACCCTCAACCGGCGAGGCTGGTCCTCAACAAAATCACTACGCAACAACCCTCTCTACCACCCTGCCTCGACATCCTCAAAGCATGGCAAAGCTCATGGTCCAAGCCACAACCACCAACAAAAGAAAGTAACCCCAAAATGATGCATAGCATGTACGCCATGATGCTATCCACCGAAGACACTCTTGAGTCTCCAACCTCCACGTTGTGCTTTCCAGGAACAACATCAACTATGCTTCCTGTCTCCAACAATAACAACATTGGAGTACTGTTCAATGAAAACAACAACAACGACATGTTTCCTCTCTCCAGCACAAACATGGAAAGTGGGTTCATGAAAGAGAACACAGTGTTACATTTGCAAGACGATGATATTATGGCGGCTGTGGAAGCATTTAGAGCCACTACTACAGTGTACGACAGCAATCATAATGTCGTTCCTCCCACACTCCCCAACGGTGGCGTCCTCGAAGGACTCAACGATGATGAAGGGTTGGTTTATGACTCCAACGATAACTTGGGAGTGGAGGAAGAAAACATGGCAATGATGAACGGGGATGGAAGCCTCTGCAACGTGAACCTGGAAGAGAATAACAAGCATTACTGGAATAACATATTTAATTTGGTGAATGATCCTTTGTCTGGTTCCTCTGTCTTCTGA 1200 0.49 MGRSPCCEKVGLKKGPWTPEEDKKLMAYIEEFGHGSWRALPSKAGLQRCGKSCRLRWTNYLRPDIKRGKFSLQEEQTIIQLHALLGNRWSAIAAQLPKRTDNEIKNYWNTHLKKRLTRMGIDPTTHKPKTDALGGSGGCQSKDAANLSHMAQWESARLEAEARLVRESKLQVQNNLGSCSNPQPARLVLNKITTQQPSLPPCLDILKAWQSSWSKPQPPTKESNPKMMHSMYAMMLSTEDTLESPTSTLCFPGTTSTMLPVSNNNNIGVLFNENNNNDMFPLSSTNMESGFMKENTVLHLQDDDIMAAVEAFRATTTVYDSNHNVVPPTLPNGGVLEGLNDDEGLVYDSNDNLGVEEENMAMMNGDGSLCNVNLEENNKHYWNNIFNLVNDPLSGSSVF* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g02656 399 CDD SANT 69 112 IPR001005 -
Phac2g02656 399 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 237 - -
Phac2g02656 399 CDD SANT 16 61 IPR001005 -
Phac2g02656 399 Gene3D - 13 66 - -
Phac2g02656 399 SMART sant 66 114 IPR001005 -
Phac2g02656 399 SMART sant 13 63 IPR001005 -
Phac2g02656 399 Gene3D - 69 116 - -
Phac2g02656 399 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Phac2g02656 399 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Phac2g02656 399 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Phac2g02656 399 FunFam MYB transcription factor 68 129 - -
Phac2g02656 399 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Phac2g02656 399 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Phac2g02656 399 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Phac2g02656 399 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Phac2g02656 399 FunFam MYB-related transcription factor 13 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g02656 Phac-Chr2 27708898 27711060 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g02656 1 399 MYB Transcription Factor Family AT3G01140 47.537 3.40e-107 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phac2g02656 Myb_DNA-binding 2.4e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g02656 K09422 - gmx:100809025 671.389