LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phac2g02642	ATGAGTTCGGGAAGCCATAGTGAGAAGGAGAAGGAGAAGGAGAAGCAGAGGGTGAGTCGAACGTCGTTGATACTGTGGCACGCTCACCAAAACGACGCCGCAGCAGTGCGGAAGCTCCTGCAAGAGGATCCTTCGCTGGTTACGGCAAGGGATTACGACAACCGCACCCCGCTCCACGTCGCATCCCTCCACGGCTGGATCGAAGTCGCCACGTGTTTGATCGAATTCGGCGCCGACGTCAACGCGCAAGATCGTTGGAAAAACACTCCTCTGGCGGATGCGGAAGGAGCTAAGAAGACTGATGTGATCGAGCTTTTGCAATCTCGCGGAGGCTTGTCTTATGGGCAAACTGGAAGCCATTTTGAACCGAAGCCTGTTCCGCCGCCGTTGCCGAATAAGTGTGACTGGGAAATCGAACCTACCGAACTTGACTTCTCCAACTCCGCGAGAATCGGAAAGGGGTCTTTTGGCGAGATTTTAAAAGCCCATTGGCGTGGAACACCAGTCGCTGTTAAACGTATTCTTCCATCTCTTTCAGAAGATAGATTGGTGATTCAGGACTTCAGGCATGAGGTCAATTTGTTAGTGAAGCTTCGACACCCCAATATAGTTCAGTTTCTTGGAGCTGTTACAGACAGGAAGCCCCTTATGTTAATTACTGAGTATCTAAGAGGGGGTGATCTTCATCAGTACCTCAAAGAAAAAGGTGCACTTAGTCCAGCAACAGCTATCAACTTTTCTATGGATATTGTGAGAGGAATGGCCTATCTCCACAATGAACCAAATGTTATAATTCATCGGGACCTAAAGCCAAGGAATGTTCTTTTAGTCAATTCTAGTGCCGACCATTTAAAAGTTGGAGATTTTGGATTGAGTAAGCTTATCACTGTCCAGAGTTCTCATGATGTATACAAGATGACCGGTGAAACTGGGAGCTACCGCTACATGGCTCCTGAAGTTTTCAAACATCGGAGATATGATAAGAAGGTTGATGTGTACTCCTTTGCAATGATTTTGTATGAGATGCTTGAAGGTGAACCGCCTTTTGCAAATCTCGAGCCTTATGATGGAGCAAAACGCGCTGCTGAGGGACATAGGCCTTCATTTCGGTCAAAGGGTTATATCAATGAATTGCAAGAAGATCTCCGAGCTTCACTGATGATCTAA	1167	0.4713	MSSGSHSEKEKEKEKQRVSRTSLILWHAHQNDAAAVRKLLQEDPSLVTARDYDNRTPLHVASLHGWIEVATCLIEFGADVNAQDRWKNTPLADAEGAKKTDVIELLQSRGGLSYGQTGSHFEPKPVPPPLPNKCDWEIEPTELDFSNSARIGKGSFGEILKAHWRGTPVAVKRILPSLSEDRLVIQDFRHEVNLLVKLRHPNIVQFLGAVTDRKPLMLITEYLRGGDLHQYLKEKGALSPATAINFSMDIVRGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLITVQSSHDVYKMTGETGSYRYMAPEVFKHRRYDKKVDVYSFAMILYEMLEGEPPFANLEPYDGAKRAAEGHRPSFRSKGYINELQEDLRASLMI*	389

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phac2g02642	388	SUPERFAMILY	Ankyrin repeat	24	110	IPR036770	-
	Phac2g02642	388	ProSitePatterns	Protein kinases ATP-binding region signature.	151	172	IPR017441	GO:0005524
	Phac2g02642	388	FunFam	serine/threonine-protein kinase STY46-like	138	224	-	-
	Phac2g02642	388	ProSiteProfiles	Protein kinase domain profile.	145	388	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Phac2g02642	388	ProSiteProfiles	Ankyrin repeat region circular profile.	53	85	-	-
	Phac2g02642	388	SMART	ANK_2a	53	82	IPR002110	GO:0005515
	Phac2g02642	388	Gene3D	-	2	120	IPR036770	-
	Phac2g02642	388	Gene3D	Phosphorylase Kinase; domain 1	129	224	-	-
	Phac2g02642	388	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	264	276	IPR008271	GO:0004672\|GO:0006468
	Phac2g02642	388	Gene3D	Transferase(Phosphotransferase) domain 1	225	384	-	-
	Phac2g02642	388	CDD	STKc_MAP3K-like	151	367	-	-
	Phac2g02642	388	SMART	serkin_6	145	388	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Phac2g02642	388	ProSiteProfiles	Ankyrin repeat profile.	53	85	IPR002110	GO:0005515
	Phac2g02642	388	Pfam	Protein kinase domain	147	353	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Phac2g02642	388	SUPERFAMILY	Protein kinase-like (PK-like)	135	370	IPR011009	-
	Phac2g02642	388	Pfam	Ankyrin repeats (3 copies)	20	84	IPR002110	GO:0005515
	Phac2g02642	388	PANTHER	SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED	77	371	-	-
	Phac2g02642	388	PIRSF	ILK	1	385	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Phac2g02642	Phac-Chr2	27581983	27594735	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Phac2g02642	10	380	MAP Kinase Kinase Kinase	AT1G14000	85.984	0.0	654

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	TKL-Pl-5	Phac2g02642		PK_Tyr_Ser-Thr	1.2e-54	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Phac2g02642	-		-	gmx:100793237	705.286