Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g02636 ATGAAGGGGAAAATGGCAAACAAGAGAAAAAGATGGGAATGTGAAGGAGGGGAAAAGAACAGTGAAGAAGGGAACACTGAATGGGAAAAACTAAGGGAAGAAGCAGCTTCAATGGCTGCTGCTATACTTAGAGCTAGAAGAGCTAACAAACGTTACATTGGGGTGAGACAAAGACCCTCAGGGCGATGGGTGGCTGAAATCAAAGACACCATACAGAACATTAGACTTTGGTTAGGCACTTACGACAATGCTGAAGATGCTGCAAGAGCTTATGATGCTGCAGCACGTTTGCTTCGTGGTGCCAACACTCGCACTAACTTTTTTCCATCCCAATATTCTCCTTCTGTTTCTGCTCTTCCTCCAAAAATTGCCAAACTCCTCCTTGTTAGGCTCAAAGCTAGAAACTTTGCCTCTTCATGTAGGGTTACCACTCCTCTTCCCAGTAACCATTATGATCAAGAAACCACAGTAGAACCTCAACCTGAACCAGAACCTGAATCTCAGCCTGAGCCAGAACCTAAATTATATCTCCAAACAGAAGAACCCCACTACGGGAATTTTGTAGATATGAAAGGAAATGGGATTGTTGAAGAAAGTTATTATGGTGCTAGTTATAGTTCTTATGCCATAACTACTTGTGACTATAGCTGTGGAACTCATGAAGAAACTTCTAACCAAAAGTGTAGCGGGGAAGATTTCAGCTTCGGGTATAATTTTGCTGATAATGTTTATGATGAAAACAAGCACATTGTGAGTGGTAAAGGAGAGTTGGAAGCTTGTGATTTTCAGTTTTTGGACTGTGCTGGATCACTGAGTTACTCTTTTTCTCCATTTGAGATAGCAGAAGAGATGGTGGGAGCGATAGAGGAAAACAGATATTACGATGTTGATGATTCAGCCTTAGGTAGAGAAACTTTCAGGATGAAGTATGAACGTAAATTCTCGGCTTGTCTTTACACCTTAACCGGAGTGTCTGAGTGTTTGAGACTACAAGTTGGACCAGAAAATGGAAAGGAATTCGAAGATTTTTTAGGATGCTAA 1041 0.414 MKGKMANKRKRWECEGGEKNSEEGNTEWEKLREEAASMAAAILRARRANKRYIGVRQRPSGRWVAEIKDTIQNIRLWLGTYDNAEDAARAYDAAARLLRGANTRTNFFPSQYSPSVSALPPKIAKLLLVRLKARNFASSCRVTTPLPSNHYDQETTVEPQPEPEPESQPEPEPKLYLQTEEPHYGNFVDMKGNGIVEESYYGASYSSYAITTCDYSCGTHEETSNQKCSGEDFSFGYNFADNVYDENKHIVSGKGELEACDFQFLDCAGSLSYSFSPFEIAEEMVGAIEENRYYDVDDSALGRETFRMKYERKFSACLYTLTGVSECLRLQVGPENGKEFEDFLGC* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g02636 346 PRINTS Ethylene responsive element binding protein signature 52 63 IPR001471 GO:0003700|GO:0006355
Phac2g02636 346 PRINTS Ethylene responsive element binding protein signature 74 90 IPR001471 GO:0003700|GO:0006355
Phac2g02636 346 MobiDBLite consensus disorder prediction 1 26 - -
Phac2g02636 346 SMART rav1_2 51 114 IPR001471 GO:0003700|GO:0006355
Phac2g02636 346 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 27 225 - -
Phac2g02636 346 MobiDBLite consensus disorder prediction 8 26 - -
Phac2g02636 346 SUPERFAMILY DNA-binding domain 51 108 IPR016177 GO:0003677
Phac2g02636 346 Pfam AP2 domain 51 100 IPR001471 GO:0003700|GO:0006355
Phac2g02636 346 ProSiteProfiles AP2/ERF domain profile. 51 108 IPR001471 GO:0003700|GO:0006355
Phac2g02636 346 FunFam ethylene-responsive transcription factor RAP2-11 50 109 - -
Phac2g02636 346 CDD AP2 50 107 IPR001471 GO:0003700|GO:0006355
Phac2g02636 346 Gene3D AP2/ERF domain 50 109 IPR036955 GO:0003700|GO:0006355
Phac2g02636 346 MobiDBLite consensus disorder prediction 144 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g02636 Phac-Chr2 27546638 27547898 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g02636 47 127 AP2-EREBP Transcription Factor Family AT5G19790 63.415 1.41e-26 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Phac2g02636 AP2 4.1e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g02636 K09286 - gmx:100793940 417.542