Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g02629 ATGGAGGAGAGGAAGTATGTGTGCAAGTATTGCAGCAAGAGGTTTCCTTGTGGGAAGTCTCTGGGGGGTCACATCAGGACCCATATGACTGAAGAAAGAAGTAATGCTGATGCTGACATGTTCATCAAGTCGGATGGTGTGAAGAAGAAGAGAGATTTATGGTGCGAAGATGTTGTTGGGAACCCCATTTATGGCCTCAGAGAGAACCCCAAGAAAACAATGAGGTTTGTGCATTCTGGTGGTAGTGCCGCTGCCGGTGCCAACTATGAAAAGGAGGAGAGGTTCTGCAAAGAATGCGGGAAAGGTTTCCCATCGCTGAAGGCTCTCTGTGGTCACATGGCTTGTCACTCCGATAAAGAGAAGAGAACCATCAAGTTTGAAGACAGTGACAAGAAACTGAAATTGGTTATGGATAGTCAATCTGACACCGAGACTTGTGCTCCATCTCATCCAAGGAGATCCAAGAGAACCAGGGTGAAGACCATTAACCTTTCCAATCACCCTTTTTCTTCTTCTTCTCCTTCTTCTTCTTCTGTTGTTCCGTTGGCCAATGGCTCTTCACCCGTGTCAGAGGTGGAGCAGGAGCAAGAAGAGGTTGCTAGGTGCTTGATGCTGCTGTCTAGAGATTCTAGCTTCAAGGGTCGTTTTGCTTCGGTTACCGAATTTTCTGATAACAACTCAGTCATTCTAGAAGCAAAATCATCCTCTCCTGATACCCGGCTTGGTGTCAGCAATGGTAATTATAACTTTGTCTCTAATAATGCTTATGATCTTGTTGACAAGAAGTTGCTTAGGGTTAATGATATAAAGTTAAAGTCTGTTGAGTTAGGTGCTTCTGATAATTCAGGTTCTAGATATTTCAAACATGGTCCCAAAGCCAAAATGGTAGACTCAGATGTCTCAAATGATGAATTTAAGTGGCCCAAAGTGGGAGATAAGTCCAGCAAATACACTGCAACTTTAGTAAAGAAATTAGTAATGGAGGATTTGGATTATGATAGAACAGATGGAACTACAAGGAAGTTTGATTCAAGAAAGAGAAGCAACTACGATTCTCTTGATCACAATCCAGTTGGCGGTTCTAGCAAGATAGCAAATGGTTTTGGTAATGAAGTATGCGGGAATGGCACAAAAGGTTGGAAGTATGAGTTGGAGGGTGAAAGGGACTATGATTCTTATGATTCCATAGAGGAGAGCCATGAAAACAGTTCAGAGACTGAATCATATCCTGCTCCCAGGTCTCATAACAGCAAGGCTCTCAATGGAAAGAAGTCCACCAGCAAGGCAAAGAAGAAGCTGAAGTCTAAGAAAAGCAGGGATCATGAGTGTCCAATCTGCTACAAAATTTTCAGGTCAGGCCAAGCCTTGGGAGGTCACAAAAGATCCCATTTCATTGGAGGTTCCGAAGAGAACACTCTGGTGATCAAACAAGCTGCTCCTGTTGTTCCATGCCTGATTGATCTCAATCTACCTGCTCCTGTTGATGAATAG 1491 0.4346 MEERKYVCKYCSKRFPCGKSLGGHIRTHMTEERSNADADMFIKSDGVKKKRDLWCEDVVGNPIYGLRENPKKTMRFVHSGGSAAAGANYEKEERFCKECGKGFPSLKALCGHMACHSDKEKRTIKFEDSDKKLKLVMDSQSDTETCAPSHPRRSKRTRVKTINLSNHPFSSSSPSSSSVVPLANGSSPVSEVEQEQEEVARCLMLLSRDSSFKGRFASVTEFSDNNSVILEAKSSSPDTRLGVSNGNYNFVSNNAYDLVDKKLLRVNDIKLKSVELGASDNSGSRYFKHGPKAKMVDSDVSNDEFKWPKVGDKSSKYTATLVKKLVMEDLDYDRTDGTTRKFDSRKRSNYDSLDHNPVGGSSKIANGFGNEVCGNGTKGWKYELEGERDYDSYDSIEESHENSSETESYPAPRSHNSKALNGKKSTSKAKKKLKSKKSRDHECPICYKIFRSGQALGGHKRSHFIGGSEENTLVIKQAAPVVPCLIDLNLPAPVDE* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g02629 496 ProSiteProfiles Zinc finger C2H2 type domain profile. 94 121 IPR013087 -
Phac2g02629 496 SMART c2h2final6 441 463 IPR013087 -
Phac2g02629 496 SMART c2h2final6 94 116 IPR013087 -
Phac2g02629 496 SMART c2h2final6 6 28 IPR013087 -
Phac2g02629 496 MobiDBLite consensus disorder prediction 394 437 - -
Phac2g02629 496 ProSitePatterns Zinc finger C2H2 type domain signature. 443 463 IPR013087 -
Phac2g02629 496 MobiDBLite consensus disorder prediction 138 186 - -
Phac2g02629 496 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 1 496 - -
Phac2g02629 496 MobiDBLite consensus disorder prediction 336 367 - -
Phac2g02629 496 MobiDBLite consensus disorder prediction 336 352 - -
Phac2g02629 496 ProSitePatterns Zinc finger C2H2 type domain signature. 8 28 IPR013087 -
Phac2g02629 496 Gene3D Classic Zinc Finger 1 54 - -
Phac2g02629 496 ProSitePatterns Zinc finger C2H2 type domain signature. 96 116 IPR013087 -
Phac2g02629 496 Pfam C2H2-type zinc finger 96 118 - -
Phac2g02629 496 Pfam C2H2-type zinc finger 6 30 - -
Phac2g02629 496 Pfam C2H2-type zinc finger 441 463 - -
Phac2g02629 496 SUPERFAMILY beta-beta-alpha zinc fingers 2 32 IPR036236 -
Phac2g02629 496 MobiDBLite consensus disorder prediction 161 186 - -
Phac2g02629 496 ProSiteProfiles Zinc finger C2H2 type domain profile. 6 33 IPR013087 -
Phac2g02629 496 MobiDBLite consensus disorder prediction 405 423 - -
Phac2g02629 496 ProSiteProfiles Zinc finger C2H2 type domain profile. 441 463 IPR013087 -
Phac2g02629 496 SUPERFAMILY beta-beta-alpha zinc fingers 95 463 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g02629 Phac-Chr2 27490191 27495100 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g02629 1 496 C2H2 Transcription Factor Family AT1G26610 41.942 1.55e-93 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phac2g02629 zf-C2H2_6 5.3e-07 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g02629 - - vun:114177115 804.283