Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g02628 ATGGAGGAGAGGAAGTATGTGTGCAAGTATTGCAGCAAGAGGTTTCCTTGTGGGAAGTCTCTGGGGGGTCACATCAGGACCCATATGACTGAAGAAAGAAGTAATGCTGATGCTGACATGTTCATCAAGTCGGATGGTGTGAAGAAGAAGAGAGATTTATGGTGCGAAGATGTTGTTGGGAACCCCATTTATGGCCTCAGAGAGAACCCCAAGAAAACAATGAGGTTTGTGCATTCTGGTGGTAGTGCCGCTGCCGGTGCCAACTATGAAAAGGAGGAGAGGTTCTGCAAAGAATGCGGGAAAGGTTTCCCATCGCTGAAGGCTCTCTGTGGTCACATGGCTTGTCACTCCGATAAAGAGAAGAGAACCATCAAGTTTGAAGACAGTGACAAGAAACTGAAATTGGTTATGGATAGTCAATCTGACACCGAGACTTGTGCTCCATCTCATCCAAGGAGATCCAAGAGAACCAGGGTGAAGACCATTAACCTTTCCAATCACCCTTTTTCTTCTTCTTCTCCTTCTTCTTCTTCTGTTGTTCCGTTGGCCAATGGCTCTTCACCCGTGTCAGAGGTGGAGCAGGAGCAAGAAGAGGTTGCTAGGTGCTTGATGCTGCTGTCTAGAGATTCTAGCTTCAAGGGTCGTTTTGCTTCGGTTACCGAATTTTCTGATAACAACTCAGTCATTCTAGAAGCAAAATCATCCTCTCCTGATACCCGGCTTGGTGTCAGCAATGGTTCTAGATATTTCAAACATGGTCCCAAAGCCAAAATGGTAGACTCAGATGTCTCAAATGATGAATTTAAGTGGCCCAAAGTGGGAGATAAGTCCAGCAAATACACTGCAACTTTAGTAAAGAAATTAGTAATGGAGGATTTGGATTATGATAGAACAGATGGAACTACAAGGAAGTTTGATTCAAGAAAGAGAAGCAACTACGATTCTCTTGATCACAATCCAGTTGGCGGTTCTAGCAAGATAGCAAATGGTTTTGGTAATGAAGTATGCGGGAATGGCACAAAAGGTTGGAAGTATGAGTTGGAGGGTGAAAGGGACTATGATTCTTATGATTCCATAGAGGAGAGCCATGAAAACAGTTCAGAGACTGAATCATATCCTGCTCCCAGGTCTCATAACAGCAAGGCTCTCAATGGAAAGAAGTCCACCAGCAAGGCAAAGAAGAAGCTGAAGTCTAAGAAAAGCAGGGATCATGAGTGTCCAATCTGCTACAAAATTTTCAGGTCAGGCCAAGCCTTGGGAGGTCACAAAAGATCCCATTTCATTGGAGGTTCCGAAGAGAACACTCTGGTGATCAAACAAGCTGCTCCTGTTGTTCCATGCCTGATTGATCTCAATCTACCTGCTCCTGTTGATGAATAG 1380 0.4449 MEERKYVCKYCSKRFPCGKSLGGHIRTHMTEERSNADADMFIKSDGVKKKRDLWCEDVVGNPIYGLRENPKKTMRFVHSGGSAAAGANYEKEERFCKECGKGFPSLKALCGHMACHSDKEKRTIKFEDSDKKLKLVMDSQSDTETCAPSHPRRSKRTRVKTINLSNHPFSSSSPSSSSVVPLANGSSPVSEVEQEQEEVARCLMLLSRDSSFKGRFASVTEFSDNNSVILEAKSSSPDTRLGVSNGSRYFKHGPKAKMVDSDVSNDEFKWPKVGDKSSKYTATLVKKLVMEDLDYDRTDGTTRKFDSRKRSNYDSLDHNPVGGSSKIANGFGNEVCGNGTKGWKYELEGERDYDSYDSIEESHENSSETESYPAPRSHNSKALNGKKSTSKAKKKLKSKKSRDHECPICYKIFRSGQALGGHKRSHFIGGSEENTLVIKQAAPVVPCLIDLNLPAPVDE* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g02628 459 ProSiteProfiles Zinc finger C2H2 type domain profile. 94 121 IPR013087 -
Phac2g02628 459 SUPERFAMILY beta-beta-alpha zinc fingers 2 32 IPR036236 -
Phac2g02628 459 SMART c2h2final6 94 116 IPR013087 -
Phac2g02628 459 SMART c2h2final6 404 426 IPR013087 -
Phac2g02628 459 SMART c2h2final6 6 28 IPR013087 -
Phac2g02628 459 MobiDBLite consensus disorder prediction 138 186 - -
Phac2g02628 459 MobiDBLite consensus disorder prediction 299 315 - -
Phac2g02628 459 SUPERFAMILY beta-beta-alpha zinc fingers 95 426 IPR036236 -
Phac2g02628 459 ProSitePatterns Zinc finger C2H2 type domain signature. 8 28 IPR013087 -
Phac2g02628 459 ProSitePatterns Zinc finger C2H2 type domain signature. 96 116 IPR013087 -
Phac2g02628 459 Gene3D Classic Zinc Finger 1 54 - -
Phac2g02628 459 ProSiteProfiles Zinc finger C2H2 type domain profile. 404 426 IPR013087 -
Phac2g02628 459 MobiDBLite consensus disorder prediction 368 386 - -
Phac2g02628 459 MobiDBLite consensus disorder prediction 299 331 - -
Phac2g02628 459 MobiDBLite consensus disorder prediction 161 186 - -
Phac2g02628 459 ProSiteProfiles Zinc finger C2H2 type domain profile. 6 33 IPR013087 -
Phac2g02628 459 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 1 459 - -
Phac2g02628 459 MobiDBLite consensus disorder prediction 357 400 - -
Phac2g02628 459 ProSitePatterns Zinc finger C2H2 type domain signature. 406 426 IPR013087 -
Phac2g02628 459 Pfam C2H2-type zinc finger 6 30 - -
Phac2g02628 459 Pfam C2H2-type zinc finger 404 426 - -
Phac2g02628 459 Pfam C2H2-type zinc finger 96 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g02628 Phac-Chr2 27490191 27495100 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g02628 1 459 C2H2 Transcription Factor Family AT1G26610 40.828 2.49e-89 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phac2g02628 zf-C2H2_6 4.8e-07 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g02628 - - vun:114177115 822.772