Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g02604 ATGGCGGGTTTATTCTCACTAGGAGGTAGAGGAAACAACAACGAAGAGGAGATTCCTCCCCCTCCTGATACCCTATACTGGTATAACAACAAGAATGACGACGTTTCTTCTTACCACCACCGAGGCGGTGGCTTTGAGCTATGGAACCAACAGCAGCAGCAACACTTTATGGACCAGGGTCCTCCACAACCACGACCCCTCTTTCACCAAGATCTATACTCCGCCTTGGGCGTTGGTGTTGGACCCAGCAGGCCTATCTCCGATGATCAGTCATCATCGAGATCCGGCTTCATGGTGGGAGGAGGAAGCGGGAGTGGAAGCGGTGGGATTAGCTGTCAAGATTGTGGAAACCAAGCTAAAAAAGATTGCCCTCACATGCGGTGCAGAACATGCTGCAAGAGCCGGGGCTTCGATTGCCAAACCCATGTCAAGAGCACATGGGTACCGGCTTCACGCCGTCGCGAGAGACAGCAACAACTCTCCACGTTACAACAAAACATTGAAAGTTCTGGAGACCTTCCCAAAAGGCAGAGAGAGAGGGATCATAATAACCCCACCTCCTCTTCTCTCGCCTGCACTCGCTTGCCTTCCAATCCCTCCTCCTCAGGGTTAGAGGAGGTTAATTTCCCGGCGGTGGTGAGATCTTCTGCGGAGTTCAGGTGCGTACGTGTGAGCTCGATGGACGAGGCGGATGAGGAGTATGCATACTCAACTGCTGTGAACATTGGAGGGCATGTGTTCAAAGGGATTTTATATGACTATGGTCCAGAAGGTAACCGTAATTACATGGGTGGTAATGGGGAAAGCTCCTCCACTGGGGTTGGAGGTTTGAACCTCACTACTGGTGCTGTTGTCTCAGAGCCACTCCTTGATCCTTCTTCTTCCTTGTATCCAGCTCCTCTTAACACCTTCATGCCTGGTAGCGGTACGCAATTCTTCCCTCACCCACACCCACGATCTTGA 963 0.5171 MAGLFSLGGRGNNNEEEIPPPPDTLYWYNNKNDDVSSYHHRGGGFELWNQQQQQHFMDQGPPQPRPLFHQDLYSALGVGVGPSRPISDDQSSSRSGFMVGGGSGSGSGGISCQDCGNQAKKDCPHMRCRTCCKSRGFDCQTHVKSTWVPASRRRERQQQLSTLQQNIESSGDLPKRQRERDHNNPTSSSLACTRLPSNPSSSGLEEVNFPAVVRSSAEFRCVRVSSMDEADEEYAYSTAVNIGGHVFKGILYDYGPEGNRNYMGGNGESSSTGVGGLNLTTGAVVSEPLLDPSSSLYPAPLNTFMPGSGTQFFPHPHPRS* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g02604 320 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 1 302 IPR007818 GO:0003700|GO:0006355
Phac2g02604 320 MobiDBLite consensus disorder prediction 184 205 - -
Phac2g02604 320 MobiDBLite consensus disorder prediction 1 22 - -
Phac2g02604 320 Pfam Domain of unknown function (DUF702) 109 257 - -
Phac2g02604 320 NCBIfam putative zinc finger domain, LRP1 type 111 153 IPR006510 -
Phac2g02604 320 MobiDBLite consensus disorder prediction 162 205 - -
Phac2g02604 320 MobiDBLite consensus disorder prediction 85 103 - -
Phac2g02604 320 NCBIfam LRP1 C-terminal domain 209 256 IPR006511 -
Phac2g02604 320 MobiDBLite consensus disorder prediction 81 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g02604 Phac-Chr2 27259423 27262641 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g02604 1 316 C2H2 Transcription Factor Family AT3G51060 46.597 1.33e-78 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Phac2g02604 DUF702 2.1e-64 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g02604 - - gmx:100814589 478.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac2g02604 2 27259423 27262641 Phac2g02604 2 27259423 27262641 ECH