Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g02595 ATGAGATCTTCTATGGGTACTTTCTCTTCCTCCTTTACAAATGTTCGTTCCGCCTCATCATGGTTCGAGTTGTACGCTTCTTTCTCCACATTCATTATGCTTCTGAGAAGCGCAATCAACGATCTCATACCCCCACAAGTTCGCTCTTTCGTACACTCAAAACTAAAGGCTTTCTTCACAAGCCGTCAAAAAAGCAACGTTGTCTCAATTCAGGTGGCTGAACTTTGGGATGGCCACACCAACCAACTCTTCCAAGCCGTTCAAGAGTATCTCCCGGCAAGGATCTCCCAGTCTTACAAATCCCTCAAAGTTGGGAAACTTCCAAAGCACAAGAACATACTAATGGCAGTGGATGGAAAACAGGAGGTGGTGGATGAATTTGAAAACATCAAGCTCAGATGGAAGCTGGTTGAGCAAAGCTCCCGAAAAGACTCTGATAATCGAGATCCTCTTCGTCCTCGCAAGTCAACGGGTTTCGAGAGGGAGTCGTTTTATCTAACCTTTGATGAGAAGCATCGAGATGTGGTCATGAACAAGTATCTCTTGCACGTTCTGAACGCATACCAGGAGATGCAAGCAAAGCAGAGAACCATCAAGATCCATTCCATTGGTGGTGGAAGATGTTGGCAGAAAAGTGACTTAACTCACCCAGCATCGTTCAAGTCGCTTGCATTGGATCCAGAGCAAAAGCAGGGAATCATTGATGATTTGGATAGGTTTTTGCGGAGGAAGGAACTGTACAAGAAGGTGGGGAAGCCTTGGAAACGTGGCTACCTCTTGTATGGTCCCCCAGGAACAGGAAAATCTAGCCTTATTGCTGCTATGGCCGACCACTTGAAGTTTGATGTGTATGATCTGGAACTAACCTCTGTTTTTTCTAACTCAGACCTCATGCGAACCCTGAAGGAGACATCTAACCGCTCTATCATCGTCATCGAAGACATCGACTGCAACAGAGAGGTGCATGTTCGATCAAAACCAAAAGCCTTTTCAGATTCCGATTTCGATTCCGACAATGACCACAAGCATGTCCAGATTAAGACAAACAGGTTTACTCTGTCGGGTCTGCTTAACTACATGGATGGGTTGTGGTCAAGTGGTGGAGAGGAGCGGATTTTAGTCTTCACAACCAATCACAGAGATAGAATTGACCCTGCGTTGCTGCGCCCTGGTCGTATGGACATGCACATTCACTTGTCCTTCCTCAGAAGCAAGGCCTTTCGAACTCTAGCTTCCAATTACTTAGACGTTGAAGGAGATCATCCACTCTTTCAACAAATTGATGATCTGTTGGAGAAAATACAAGTCACCCCTGCAGAGGTAGCGGAGCAACTAATGAGATATGAGGATCCTGACGTTTGTTTGGAATCACTTGTTCAATTTCTCCAACAAAAGGCCAAGGAAAGCCTCCTTTTAGACTAG 1422 0.4543 MRSSMGTFSSSFTNVRSASSWFELYASFSTFIMLLRSAINDLIPPQVRSFVHSKLKAFFTSRQKSNVVSIQVAELWDGHTNQLFQAVQEYLPARISQSYKSLKVGKLPKHKNILMAVDGKQEVVDEFENIKLRWKLVEQSSRKDSDNRDPLRPRKSTGFERESFYLTFDEKHRDVVMNKYLLHVLNAYQEMQAKQRTIKIHSIGGGRCWQKSDLTHPASFKSLALDPEQKQGIIDDLDRFLRRKELYKKVGKPWKRGYLLYGPPGTGKSSLIAAMADHLKFDVYDLELTSVFSNSDLMRTLKETSNRSIIVIEDIDCNREVHVRSKPKAFSDSDFDSDNDHKHVQIKTNRFTLSGLLNYMDGLWSSGGEERILVFTTNHRDRIDPALLRPGRMDMHIHLSFLRSKAFRTLASNYLDVEGDHPLFQQIDDLLEKIQVTPAEVAEQLMRYEDPDVCLESLVQFLQQKAKESLLLD* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g02595 473 SMART AAA_5 254 403 IPR003593 GO:0016887
Phac2g02595 473 Gene3D - 210 397 IPR027417 -
Phac2g02595 473 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 189 450 IPR027417 -
Phac2g02595 473 ProSitePatterns AAA-protein family signature. 371 389 IPR003960 GO:0005524|GO:0016887
Phac2g02595 473 PANTHER BCS1 AAA-TYPE ATPASE 25 467 - -
Phac2g02595 473 Gene3D - 398 470 - -
Phac2g02595 473 Pfam Domain associated at C-terminal with AAA 43 137 IPR025753 -
Phac2g02595 473 Pfam ATPase family associated with various cellular activities (AAA) 259 399 IPR003959 GO:0005524|GO:0016887
Phac2g02595 473 CDD RecA-like_BCS1 233 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g02595 Phac-Chr2 27143867 27146394 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g02595 256 399 Calmodulin-binding Proteins AT3G56690 30.263 8.52e-11 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g02595 - K08900 gmx:100787726 698.738