Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g02572 ATGCGTGGCACAACAAAGAATCAATTTTTGATGTTCCATTCTTTCCTTTTCTTTTATGCTTTGGTTCTCATCTCTTGCTTTCCTTCTCATTTGCCGTCGTTAACTGTGTTTTTCTTTCATGTAGGTCACTTGGAGCCTTTTTTTTCACGGCAAAATCTTGCGTCCATTGAGAAATTTCACTCATTTCTTGAATTTGGCCAAAAGGGTGGGATTTTGCAAAACTTTGCAAAGATGAATGATTTGATGACAAAATCGTTCCTAAGTTATGTGGAACTTAAGAAACAGGCACAGAAGGACCGTGAAGACGATCTTGACATTGAGACAGGGAGACTCAAACCCAAGGAAGACCGCAACCTCTCTCAGTTCTTCCAAGAAGTTGAAGCGATCAAGGTTGAAATGGAAGAGATTACCAATCTCTTAATTGATCTTCAGCAACTGAATGAAGAGGCAAAGTGCACCCACAGTGCCAAAGTTCTTCGTGGCCTAAGGGACCGGATGGAGTCTGACATGGTTGCCGTGCTTCGCAAGGCACGGATCATCAAGGCAACGCTTGAGGTTCTTGACAAATCCAACATAGTCAATCATAATTTGTCAGAAATGTACAAAGAGGGGAGCCCCATTGACAGGACCAGAATATCTGTCACAAATGGTTTGAGGGTCAGGCTTAGGGCCCTGATGAATGATTTTCAGTCCTTGAGAGACCAAATTCTATCTGATCACAAGGAAGATTTGAAGAGAAGGTACTACACAGCAACCGGTGAGATTCCCACTGAGGAGGTCATGGAGAAGATGGTTTCTGGGAGTCTCAAAGTGGAGTTTTTGGCTGGGAAAACGGATGCAGAATTGGACACTCAAGTTAGGCATGAGGCAGTGATGGATATCCAGAGGAGTTTGAATAAGCTTCACCAGGTTTTTCTTGATATGGCTGTTCTGGTTGAGACACAGGGAGAAAGCGTGGATAACATTGAGGATAATGTGGCTAATGCGGGTAACTTCATCCATGGTGGAACTAATAGTCTCTACTATGCCAGCCAGATGAAGAAAAAGAACAGAAAGTGGGTCTGTTGGGTTTTTGCTGTGGGGCTGATTATACTACTCGTATGCATAGTTGCAATGTTGTCTTCTTGA 1128 0.4317 MRGTTKNQFLMFHSFLFFYALVLISCFPSHLPSLTVFFFHVGHLEPFFSRQNLASIEKFHSFLEFGQKGGILQNFAKMNDLMTKSFLSYVELKKQAQKDREDDLDIETGRLKPKEDRNLSQFFQEVEAIKVEMEEITNLLIDLQQLNEEAKCTHSAKVLRGLRDRMESDMVAVLRKARIIKATLEVLDKSNIVNHNLSEMYKEGSPIDRTRISVTNGLRVRLRALMNDFQSLRDQILSDHKEDLKRRYYTATGEIPTEEVMEKMVSGSLKVEFLAGKTDAELDTQVRHEAVMDIQRSLNKLHQVFLDMAVLVETQGESVDNIEDNVANAGNFIHGGTNSLYYASQMKKKNRKWVCWVFAVGLIILLVCIVAMLSS* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g02572 375 CDD SNARE_syntaxin1-like 283 340 - -
Phac2g02572 375 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 281 343 IPR000727 -
Phac2g02572 375 Gene3D - 277 374 - -
Phac2g02572 375 FunFam Syntaxin 132 276 374 - -
Phac2g02572 375 FunFam Qa-SNARE, Sso1/Syntaxin1-type, SYP12A-group 116 247 - -
Phac2g02572 375 SUPERFAMILY t-snare proteins 117 336 IPR010989 GO:0016020|GO:0016192
Phac2g02572 375 PANTHER SYNTAXIN 115 364 IPR045242 -
Phac2g02572 375 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 - -
Phac2g02572 375 SMART SynN_4 114 241 IPR006011 GO:0016020
Phac2g02572 375 SMART tSNARE_6 276 343 IPR000727 -
Phac2g02572 375 Coils Coil 126 153 - -
Phac2g02572 375 Gene3D - 114 245 - -
Phac2g02572 375 CDD SynN 119 269 IPR006011 GO:0016020
Phac2g02572 375 Pfam SNARE domain 319 367 IPR000727 -
Phac2g02572 375 Pfam Syntaxin 121 316 IPR006011 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g02572 Phac-Chr2 26854643 26856172 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g02572 78 375 SNARE and Associated Proteins AT2G18260 59.283 4.31e-128 368
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g02572 K08486 - gmx:112997615 522.316
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac2g02572 2 26854643 26856172 Phac2g02572 2 26854643 26856172 ECH