Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g02564 ATGACAGGGGATACAATACTCTCAAGATGCCTAAAGACAACAAGATCATTAGAGAAAAGCTTAATCCAAATTCAGAATATGGTTCCTGTTATGTTGGCTGTGAAGGTTTCTGGAATAATTCATGATATTGAGTGCACGAGATTTGTTCTGGACCCCGATGAAGAAGAGGCTGGGAGGGTTGTGAGAGAGTTGCTCAGTTCAACCTCAGATTCAGTCGACGATGCTGAAGTTAAAGCTCTTCAGTCTGCAGCATCTCGACTGAAAATAACATCCCGGAAGGCCATCGTAACAGAGCAACGATCTATTAGGAAGTTGTTGGATAAACTTGGACCACATGACCTGACGAAGAAAAGGATGATACTGAAATATCTTCTGCATCTACTGAAAAAGCATGCAAAGCTCCTGGTAGTAGAACATGAGGAGAGGGTCTATTCTCCCGAAGAACAAGTTGTAACACAGAACTCTAGTCACGATTCTCTACGAAGCCATCACGTGGAATCAGACCAAAGCTTAAACTATGGTCAGTATATAACTCACACCAGTGAGTTGGGTGGAGTTGAACCCCCTGAGCAATTTAAGTGCCCAATATCCTCAAGGTTGATGTATGATCCTGTTATCATTGAGTCGGGAGAAACATATGAAAGGATGTGGATAAAAAAGTGGTTTGATGAGGGTAATGACATATGCCCCAAAACCAGAAAGGAACTAGTCCATACGGCTTTAACTCCAAACGTGTCCATGAAGAACCACATATCAAAGTGGTGCAGAAAAAATGGAGTCTCCATTCCAGATCCTAGTAGGCATGAAGAAGATATTCGCTCATGGGAAGCTTCAAGCACTTCCATTAATAGTATAGGAAGTTATTACAACGACTTCAACTCGCCAGTGGATCTCAGTAACATGTCAATTGGGTCACTTGATACTAGTTTTTGTTCAGATGCCTCGCATGGTAAGACCACTCGTGGCTCTATGTTGATCAAGAGCAGTGACAATTCTGAAAGACATCAAGTTCATGCAGAGATACAAGATAGTGATTTGATGCTCTTGCCTCAACTCCGTGATCTTCAATGGGAATCTCAATGCAAGGTCATTCAAGACCTGAAAGATCACTTGAAAAGCAATAGCCAAGCTTTTGTTTCTGTATCAGCAGAGAATTTGGTTGAACCACTCCTCAGATTTCTGAGCAATGCATATGATCTGCGTGATGTTCAAGCCTTGAGAGCTGGAACTCAGCTTCTGTTGGACTTTGTCAACAACTGCAGAAATGGTAATACTACTTTGAATGATGATGCGTTCATTATGTTGGCAAGTTTTCTTGATTCAGAAGCGATAGAAGAAATTCTTGTCATACTGGAAGAACTGTCAGGATATCGGTTTAGTAAAACTAAAATAGCAGCATCAAGTGCTCTCAATTCAATTTTAAACATACTTGATTCCGAAAACAAAGGTTTCCAACAACGAGCCATTAGAATAATGTACAATTTGTCTTTCATTAGTGAAGTCTGTCCCAGCATGCTATCACTCAACTGCATCCCAAAATTGCTGCCATTTTTCAAAGACAGAACCCTTTTGAGATACTGCATATATATATTGAAAAATCTGTGTGATACTGAAGAGGGTAGGAATTCTGTTGCTGAAACAAAGGGATGCATAACTTCTGTGGCTGAAATACTTAATTCAGGCAATAATGAAGAACAAGAACATGCACTGGCAGTTCTAGTCTCTCTATGCTCTCATGTGGATTATAGTAAGTTAGTAATGAGAGAGCATGAGAATATCATAACTTCTCTTTTCTTGATCTCCCAGAATGGAAACGATAAAGGAAAGAAAAGTGCGTTGGAATTGATCCATATTTTGAATGGTGTCAACATCGTTGACAATAAAGGTTGCCCTGAACCAAATATCAGCAACTCTTGTCGAGATTCCATCAGTCACCCACCTGAAGAAAGTAGACCATCAAAGAGATCCACGTTTTTGAAGAAACTATCTCCATTTTCAAAGTCCAGTTCACATGCATCAAAAACCAAAAGATGA 2034 0.4007 MTGDTILSRCLKTTRSLEKSLIQIQNMVPVMLAVKVSGIIHDIECTRFVLDPDEEEAGRVVRELLSSTSDSVDDAEVKALQSAASRLKITSRKAIVTEQRSIRKLLDKLGPHDLTKKRMILKYLLHLLKKHAKLLVVEHEERVYSPEEQVVTQNSSHDSLRSHHVESDQSLNYGQYITHTSELGGVEPPEQFKCPISSRLMYDPVIIESGETYERMWIKKWFDEGNDICPKTRKELVHTALTPNVSMKNHISKWCRKNGVSIPDPSRHEEDIRSWEASSTSINSIGSYYNDFNSPVDLSNMSIGSLDTSFCSDASHGKTTRGSMLIKSSDNSERHQVHAEIQDSDLMLLPQLRDLQWESQCKVIQDLKDHLKSNSQAFVSVSAENLVEPLLRFLSNAYDLRDVQALRAGTQLLLDFVNNCRNGNTTLNDDAFIMLASFLDSEAIEEILVILEELSGYRFSKTKIAASSALNSILNILDSENKGFQQRAIRIMYNLSFISEVCPSMLSLNCIPKLLPFFKDRTLLRYCIYILKNLCDTEEGRNSVAETKGCITSVAEILNSGNNEEQEHALAVLVSLCSHVDYSKLVMREHENIITSLFLISQNGNDKGKKSALELIHILNGVNIVDNKGCPEPNISNSCRDSISHPPEESRPSKRSTFLKKLSPFSKSSSHASKTKR* 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g02564 677 SUPERFAMILY RING/U-box 177 265 - -
Phac2g02564 677 CDD RING-Ubox_PUB 189 241 IPR045210 -
Phac2g02564 677 PANTHER U BOX DOMAIN-CONTAINING 17 619 - -
Phac2g02564 677 MobiDBLite consensus disorder prediction 636 677 - -
Phac2g02564 677 SUPERFAMILY ARM repeat 348 619 IPR016024 -
Phac2g02564 677 Pfam U-box domain 189 258 IPR003613 GO:0004842|GO:0016567
Phac2g02564 677 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 186 262 IPR013083 -
Phac2g02564 677 Pfam Kinesin-associated protein (KAP) 402 577 - -
Phac2g02564 677 Gene3D - 347 638 IPR011989 -
Phac2g02564 677 ProSiteProfiles U-box domain profile. 187 261 IPR003613 GO:0004842|GO:0016567
Phac2g02564 677 SMART Ubox_2 191 254 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g02564 Phac-Chr2 26822626 26828583 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g02564 1 623 U-box Gene Family AT4G36550 35.591 4.01e-110 347
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g02564 - - gmx:100791627 1003.82