Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g02560 ATGATAGTGATGGTACTGATGATATTTAGTTGGTTTGAATATTACTTTCAGGTTATGACAGGGGATACAATACTCTCAAGATGCCTAAAGACAACAAGATCATTAGAGAAAAGCTTAATCCAAATTCAGAATATGGTTCCTGTTATGTTGGCTGTGAAGGTTTCTGGAATAATTCATGATATTGAGTGCACGAGATTTGTTCTGGACCCCGATGAAGAAGAGGCTGGGAGGGTTGTGAGAGAGTTGCTCAGTTCAACCTCAGATTCAGTCGACGATGCTGAAGTTAAAGCTCTTCAGTCTGCAGCATCTCGACTGAAAATAACATCCCGGAAGGCCATCGTAACAGAGCAACGATCTATTAGGAAGTTGTTGGATAAACTTGGACCACATGACCTGACGAAGAAAAGGATGATACTGAAATATCTTCTGCATCTACTGAAAAAGCATGCAAAGCTCCTGGTAGTAGAACATGAGGAGAGGGTCTATTCTCCCGAAGAACAAGTTGTAACACAGAACTCTAGTCACGATTCTCTACGAAGCCATCACGTGGAATCAGACCAAAGCTTAAACTATGGTCAGTATATAACTCACACCAGTGAGTTGGGTGGAGTTGAACCCCCTGAGCAATTTAAGTGCCCAATATCCTCAAGGTTGATGTATGATCCTGTTATCATTGAGTCGGGAGAAACATATGAAAGGATGTGGATAAAAAAGTGGTTTGATGAGGGTAATGACATATGCCCCAAAACCAGAAAGGAACTAGTCCATACGGCTTTAACTCCAAACGTGTCCATGAAGAACCACATATCAAAGTGGTGCAGAAAAAATGGAGTCTCCATTCCAGATCCTAGTAGGCATGAAGAAGATATTCGCTCATGGGAAGCTTCAAGCACTTCCATTAATAGTATAGGAAGTTATTACAACGACTTCAACTCGCCAGTGGATCTCAGTAACATGTCAATTGGGTCACTTGATACTAGTTTTTGTTCAGATGCCTCGCATGGTAAGACCACTCGTGGCTCTATGTTGATCAAGAGCAGTGACAATTCTGAAAGACATCAAGTTCATGCAGAGATACAAGATAGTGATTTGATGCTCTTGCCTCAACTCCGTGATCTTCAATGGGAATCTCAATGCAAGGTCATTCAAGACCTGAAAGATCACTTGAAAAGCAATAGCCAAGCTTTTGTTTCTGTATCAGCAGAGAATTTGGTTGAACCACTCCTCAGATTTCTGAGCAATGCATATGATCTGCGTGATGTTCAAGCCTTGAGAGCTGGAACTCAGCTTCTGTTGGACTTTGTCAACAACTGCAGAAATGGTAATACTACTTTGAATGATGATGCGTTCATTATGTTGGCAAGTTTTCTTGATTCAGAAGCGATAGAAGAAATTCTTGTCATACTGGAAGAACTGTCAGGATATCGGTTTAGTAAAACTAAAATAGCAGCATCAAGTGCTCTCAATTCAATTTTAAACATACTTGATTCCGAAAACAAAGGTTTCCAACAACGAGCCATTAGAATAATGTACAATTTGTCTTTCATTAGTGAAGTCTGTCCCAGCATGCTATCACTCAACTGCATCCCAAAATTGCTGCCATTTTTCAAAGACAGAACCCTTTTGAGATACTGCATATATATATTGAAAAATCTGTGTGATACTGAAGAGGGTAGGAATTCTGTTGCTGAAACAAAGGGATGCATAACTTCTGTGGCTGAAATACTTAATTCAGGCAATAATGAAGAACAAGAACATGCACTGGCAGTTCTAGTCTCTCTATGCTCTCATGTGGATTATAGTAAGTTAGTAATGAGAGAGCATGAGAATATCATAACTTCTCTTTTCTTGATCTCCCAGAATGGAAACGATAAAGGAAAGAAAAGTGCGTTGGAATTGATCCATATTTTGAATGGTGTCAACATCGTTGACAATAAAGGTTGCCCTGAACCAAATATCAGCAACTCTTGTCGAGATTCCATCAGTCACCCACCTGAAGAAAGTAGACCATCAAAGAGATCCACGTTTTTGAAGAAACTATCTCCATTTTCAAAGTCCAGTTCACATGCATCAAAAACCAAAAGATGA 2088 0.398 MIVMVLMIFSWFEYYFQVMTGDTILSRCLKTTRSLEKSLIQIQNMVPVMLAVKVSGIIHDIECTRFVLDPDEEEAGRVVRELLSSTSDSVDDAEVKALQSAASRLKITSRKAIVTEQRSIRKLLDKLGPHDLTKKRMILKYLLHLLKKHAKLLVVEHEERVYSPEEQVVTQNSSHDSLRSHHVESDQSLNYGQYITHTSELGGVEPPEQFKCPISSRLMYDPVIIESGETYERMWIKKWFDEGNDICPKTRKELVHTALTPNVSMKNHISKWCRKNGVSIPDPSRHEEDIRSWEASSTSINSIGSYYNDFNSPVDLSNMSIGSLDTSFCSDASHGKTTRGSMLIKSSDNSERHQVHAEIQDSDLMLLPQLRDLQWESQCKVIQDLKDHLKSNSQAFVSVSAENLVEPLLRFLSNAYDLRDVQALRAGTQLLLDFVNNCRNGNTTLNDDAFIMLASFLDSEAIEEILVILEELSGYRFSKTKIAASSALNSILNILDSENKGFQQRAIRIMYNLSFISEVCPSMLSLNCIPKLLPFFKDRTLLRYCIYILKNLCDTEEGRNSVAETKGCITSVAEILNSGNNEEQEHALAVLVSLCSHVDYSKLVMREHENIITSLFLISQNGNDKGKKSALELIHILNGVNIVDNKGCPEPNISNSCRDSISHPPEESRPSKRSTFLKKLSPFSKSSSHASKTKR* 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g02560 695 SMART Ubox_2 209 272 IPR003613 GO:0004842|GO:0016567
Phac2g02560 695 CDD RING-Ubox_PUB 207 259 IPR045210 -
Phac2g02560 695 ProSiteProfiles U-box domain profile. 205 279 IPR003613 GO:0004842|GO:0016567
Phac2g02560 695 MobiDBLite consensus disorder prediction 654 695 - -
Phac2g02560 695 SUPERFAMILY RING/U-box 195 283 - -
Phac2g02560 695 SUPERFAMILY ARM repeat 366 637 IPR016024 -
Phac2g02560 695 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 204 280 IPR013083 -
Phac2g02560 695 PANTHER U BOX DOMAIN-CONTAINING 35 637 - -
Phac2g02560 695 Gene3D - 365 656 IPR011989 -
Phac2g02560 695 Pfam Kinesin-associated protein (KAP) 420 595 - -
Phac2g02560 695 Pfam U-box domain 207 276 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g02560 Phac-Chr2 26822626 26828583 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g02560 16 641 U-box Gene Family AT4G36550 35.423 1.28e-110 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g02560 - - gmx:100791627 1005.36