Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g02551 ATGGAAATGGGAGGGCAAGATAAGGAAATAGAGATACCAACAAGTTTAGGTTACAACCTTCCCAACCGAGATTCTCCTTCTTCCTCTTCCAAGCTCTCTTCTCCAACAGTTGGTGAAAGAAGTACCACTCATCATGATCATGATCATGATCAACTTCATCAACCACCTCATCAAACTCACACATTAATCTTCAACCAACCGCCTCACCATAATCTCTATCAACCACCTCCTCCTCCTCTTGCACCTCGTCAACCTCATAGACTCACACCAGATCCAGATCTAAGCACCCCAATTGCTCCCACATCTAATCCTCTAAGAACAGCACACCCTCAGACAACAACAATAGCAGCAGCAGCAACAACAACAACCACCTCAACCCCGTCGATCAGATACCGAGAATGTCTTCGGAACCACGCGGCAAGCATGGGGAGCCACGTGGTGGATGGCTGTGGAGAGTTCATGGCAAGTGGAGAAGAAGGTACGCCGGAATCACTAAGATGCGCCGCGTGTGAGTGCCACCGCAACTTCCACAGGAAAGAGGTTGAGGGAGAGTTACAGCCACAGCAACCACCGCCACTGTCACTACTACCACAACAACAACAACAACATGCTCCCAATTATCACAGCTACTACCCGAACAAGCACAATGGACACCTTCACTACCCTACACCCTCTCCTTCTTCCCTCCACCATAGATTGGTTGGCAGCAGTGGTACACCAAGTTTGGTGCCCCCCGTGATGATGGCCTTTGGAGGCCCAGCTGAGTCCTCAAGTGAAGATCTCAACATGTTTCAGTCCAACACTGGAGGAGCACAGTTGTCAGTGCAGGCGCCACTTTCTTCCAAGAAGAGGTTTAGGACTAAGTTCTCTCAGCACCAGAAGGATAGGATGATGGAGTTTGCTGAAAAGATTGGTTGGAAGATCCAGAAACATAATGAGCAGGAGGTACAACACTTTTGTTCTCAAGCGGGCGTCAAGAGACAGGTTTTCAAGGTTTGGATGCACAATAACAAGAAGCACCCAATGTAA 1029 0.4869 MEMGGQDKEIEIPTSLGYNLPNRDSPSSSSKLSSPTVGERSTTHHDHDHDQLHQPPHQTHTLIFNQPPHHNLYQPPPPPLAPRQPHRLTPDPDLSTPIAPTSNPLRTAHPQTTTIAAAATTTTTSTPSIRYRECLRNHAASMGSHVVDGCGEFMASGEEGTPESLRCAACECHRNFHRKEVEGELQPQQPPPLSLLPQQQQQHAPNYHSYYPNKHNGHLHYPTPSPSSLHHRLVGSSGTPSLVPPVMMAFGGPAESSSEDLNMFQSNTGGAQLSVQAPLSSKKRFRTKFSQHQKDRMMEFAEKIGWKIQKHNEQEVQHFCSQAGVKRQVFKVWMHNNKKHPM* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g02551 342 MobiDBLite consensus disorder prediction 95 110 - -
Phac2g02551 342 Gene3D - 270 341 - -
Phac2g02551 342 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 130 181 IPR006456 -
Phac2g02551 342 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 112 339 - -
Phac2g02551 342 MobiDBLite consensus disorder prediction 40 55 - -
Phac2g02551 342 MobiDBLite consensus disorder prediction 70 86 - -
Phac2g02551 342 Pfam ZF-HD protein dimerisation region 129 181 IPR006456 -
Phac2g02551 342 MobiDBLite consensus disorder prediction 18 39 - -
Phac2g02551 342 MobiDBLite consensus disorder prediction 1 110 - -
Phac2g02551 342 NCBIfam homeobox domain, ZF-HD class 282 339 IPR006455 -
Phac2g02551 342 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 131 180 IPR006456 -
Phac2g02551 342 MobiDBLite consensus disorder prediction 181 233 - -
Phac2g02551 342 MobiDBLite consensus disorder prediction 195 209 - -
Phac2g02551 342 SUPERFAMILY Homeodomain-like 271 338 IPR009057 -
Phac2g02551 342 FunFam Zinc-finger homeodomain protein 2 270 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g02551 Phac-Chr2 26778487 26782264 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g02551 95 339 ZF-HD Transcription Factor Family AT2G18350 45.783 7.12e-65 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Phac2g02551 ZF-HD_dimer 1.8e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g02551 - - vra:106776405 529.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac2g02551 2 26778487 26782264 Phac2g02551 2 26778487 26782264 ECH