Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g02549 ATGCATCGCTGTTGCAGTGGCTCCCAGGGGCACGTCATCGGACCCTGTACATGTGGCATGTTCCACAGCCAAACCACCTCCTTCTCCATGCTCTTCTCACTGCCCAACCACAAGCCACCCTACCAAGATTCCGACATCTATGATTATTCCTTCACCCCCTCATCCTCTTCCTCTTCCTCTTCCGTTGACTGCACCCTCTCCCTCGGAACCCCATCCACCCGTTTCTCCGAAGACGAGGAAAAACGTACCCGCCACGAACGTCGCTCGGTTTCTAACTTCTGTTGGGACTTACTACAATCCAAACACAGCCCTCAATCCCAAACCAAATCCTCCCGAACCTCCAATACCACCTCAAACACCGACCCTCTCCTCGCTCGCCGCTGCGCCAATTGTGACACCACCTCAACTCCCCTTTGGAGAAATGGCCCCCGAGGCCCCAAGTCACTGTGCAATGCATGTGGGATTAGATTCAAGAAGGAGGAGAGAAGGGCGAGTGCTGCGGCTGCACCGCCGCCGCCGGCTTCTGGCGGCTTGATGGAATCGGCGCAGTTGTACAACAACTCGTGGTACACACACCCGCAGAGTCAGAAGATGCAGTGTTTCTCGCCGGGGATGGGGAGCGAGTTCCGTTTCGCGGACGACGAGAATCGAGACGCCGATAACGGCATTCCGTTTCTCTCGTGGAGACTCAACGTCACAGACAGAACGAGCCTCGTTCACGACTTCACAAGATGA 735 0.5605 MHRCCSGSQGHVIGPCTCGMFHSQTTSFSMLFSLPNHKPPYQDSDIYDYSFTPSSSSSSSSVDCTLSLGTPSTRFSEDEEKRTRHERRSVSNFCWDLLQSKHSPQSQTKSSRTSNTTSNTDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRASAAAAPPPPASGGLMESAQLYNNSWYTHPQSQKMQCFSPGMGSEFRFADDENRDADNGIPFLSWRLNVTDRTSLVHDFTR* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g02549 244 ProSiteProfiles GATA-type zinc finger domain profile. 122 158 IPR000679 GO:0006355|GO:0043565
Phac2g02549 244 MobiDBLite consensus disorder prediction 101 122 - -
Phac2g02549 244 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 125 164 - -
Phac2g02549 244 PANTHER GATA TRANSCRIPTION FACTOR 18 12 244 IPR044272 GO:0003700|GO:0009908
Phac2g02549 244 Pfam GATA zinc finger 128 162 IPR000679 GO:0006355|GO:0043565
Phac2g02549 244 ProSitePatterns GATA-type zinc finger domain. 128 153 IPR000679 GO:0006355|GO:0043565
Phac2g02549 244 CDD ZnF_GATA 127 159 IPR000679 GO:0006355|GO:0043565
Phac2g02549 244 Gene3D - 124 175 IPR013088 GO:0006355|GO:0008270
Phac2g02549 244 SMART GATA_3 122 174 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g02549 Phac-Chr2 26746055 26747780 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g02549 17 244 C2C2-Gata Transcription Factor Family AT3G50870 42.414 4.62e-59 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Phac2g02549 GATA 5.9e-18 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g02549 - - gmx:100790571 392.889