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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Phac2g02531
ATGGAAGTGGAGGCTACGAACCGTCAGAATGTGGCCAACAACAGCACGCGTCATCCCTTTTCACGGAATTTGGGAACCGCTGAGTCCCAACTCCTCCGTTTTGCCCCTTCCATTTCTTCATCGTTTTCTCTGCCAGGGTTTGAAATGGAGACGAAGGACAAAGTGAATAATGAGGATATTGCTGTGGAGTCTCCAACTTCGGTTCTCGAAGACGAGGATGTTTGTGTCCCCAAAGACGAGGTTAAGTTGGAAGAAGAGTTAATTGCTGATGTGAAAGACGATGGCTCGTCTTTTGTATCGAAGACTATGGCAGAGGAGGAAGAGAAGTTACTTAAAGCTAGGATAAAGGAAGAGGAGGTGCAGTTTGGGGAGGCACCTGACCTCAGCGACACACAGTTTAACAAATTGGATGAGCTTTTGACTCAGACCAAACTGTACTCTGAGTTTTTGCTGGAGAAAATGGATGACATCGCACTTACTGTGGGTGAACAAGTGAAAGTGGAAGAACTAGAGAGTAATCCTTCTGCAAAGAGGGGACGTGGATCGAAAAGAAAAGCTGCTTCCCAGTGCAATACTAGGAGGGCCAAGAGGGCAGTTGCTGCCATGCTAACAAGATCTAAAGAAGGTGAGGGGACTGTAGATATGAAAATGACTGAGGAAGAAAGAGTTGAGAAGGAGCAGAAAGAGCTCATGCCTTTACTGACAGGGGGGAAATTGAAGCCTTATCAACTGAAGGGTGTAAAGTGGTTGATTTCCTTGTGGCAAAATGGATTGAATGGAATTCTTGCTGATCAAATGGGTCTTGGAAAGACAATCCAAACGATTGGATTTCTCTCGCATCTAAAAGCAAAAGGTCTGGATGGGCCATACATGATAATTGCTCCTCTATCAACCCTCTCAAACTGGATGAATGAGATTTCTAGGTTTGCACCATCACTTCCTGCCATTGTCTACCATGGTGGCAAGAAGGAGAGAGATGAGATCCGAAGGAAACATATGCCTACTAGAACAATTGGCCCAAAATTTCCTATAGTCATAACTTCTTACGAGGTTGCATTAAATGACGCTAGGAAATATTTCAGGCCATACAATTGGAAATATCTCGTTGTTGATGAGGGACACAGGCTCAAAAATTCAAAATGCAAATTAGTGAAGGAGTTGAAATACATAAAAGTTGAAAACAAGATTCTTCTAACTGGAACTCCTCTTCAGAATAACCTGGCCGAATTATGGTCTCTATTGAACTTCATTTTGCCTGATATTTTTGCATCCCTTGAAGAATTTGAGTCATGGTTTAATCTGTCAGCGAAGGGCAATAATGAAGCAACCAAGGAAGAACTGGAAGAGAAACGGAGATCCCAAGTAGTAGCAAAGCTTCATGCTATTCTTCGACCCTTTCTTCTGCGTAGGATGAAGTCTGATGTTGAGATTATGTTGCCAAAGAAAAAAGAGATTATTATCTATGCAAACATGACTGAGCATCAGAAGAATTTGCAGGATCATTTAGTTAATAAGACTTTGGGAAACTATTTAGAAGAAAAGATGTCAAGCGGACGCCCTGTTCCTGGAGGTGCGATTCGTAATTTGGTTATTCAGCTTAGGAAAGTGTGTAACCATCCTGATCTTCTAGAATCAGCTTATGATGATACATCTTCCTATCCTCCTTTAAGTGAGATAGTTGAACAGTGTGGAAAATTCCATTTGCTTGATCGATTGGTGCAACGTTTATTTGCAAGGAATCACAAAGTTCTTGTCTTCAGTCAATGGACTAAAGTGTTGGATATAATGGATTATTATTTTAGTGAAAAAGGCTTTGAAGTTTGCAGGATTGATGGTTCTGTGAAACTAGATGAGAGGAAACGACAGATCGAGGACTTCAACGATGCAAATAGCAATTGCAGAGTTTTTCTTCTTTCTACTAGGGCTGGTGGATTGGGAATCAACCTCACTGCAGCTGATACTTGCATTCTTTATGACAGTGACTGGAATCCTCAGATGGATTTACAAGCCATGGATAGGTGTCATAGAATTGGTCAAACAAAACCTGTTCATGTCTACCGGCTCTCAACTGCTCAATCTATAGAGGATCGCATGTTGAAAAGAGCTTTCAGCAAATTGAAGCTTGAGCATGTAGTGATTGGGAAAGGACAGTTTCATCAAGAACGTACAAAAACTGTCAACAGGGATGACATGGAGGAAGAGGATTTTTTGGCATTGCTTCGTGACGAAGAAACAGCTGAAGATAAAATGATTCGAACAGATATTAGTGATGAAGACCTGGAGAAGCTCTTGGATCGCAGTGATCTTATTATCGTCAACAACTCGGACGATGGTAAGTCGAAATCTCCATGCAGTACCATTCCTCTTAAAGGGCCAGGGTGGGAGGTGGTGATTCCAAATGCGAGTGGAGGCATGCTCTCTACTCTCAACAGCTAG
2436
0.4212
MEVEATNRQNVANNSTRHPFSRNLGTAESQLLRFAPSISSSFSLPGFEMETKDKVNNEDIAVESPTSVLEDEDVCVPKDEVKLEEELIADVKDDGSSFVSKTMAEEEEKLLKARIKEEEVQFGEAPDLSDTQFNKLDELLTQTKLYSEFLLEKMDDIALTVGEQVKVEELESNPSAKRGRGSKRKAASQCNTRRAKRAVAAMLTRSKEGEGTVDMKMTEEERVEKEQKELMPLLTGGKLKPYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIGFLSHLKAKGLDGPYMIIAPLSTLSNWMNEISRFAPSLPAIVYHGGKKERDEIRRKHMPTRTIGPKFPIVITSYEVALNDARKYFRPYNWKYLVVDEGHRLKNSKCKLVKELKYIKVENKILLTGTPLQNNLAELWSLLNFILPDIFASLEEFESWFNLSAKGNNEATKEELEEKRRSQVVAKLHAILRPFLLRRMKSDVEIMLPKKKEIIIYANMTEHQKNLQDHLVNKTLGNYLEEKMSSGRPVPGGAIRNLVIQLRKVCNHPDLLESAYDDTSSYPPLSEIVEQCGKFHLLDRLVQRLFARNHKVLVFSQWTKVLDIMDYYFSEKGFEVCRIDGSVKLDERKRQIEDFNDANSNCRVFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLSTAQSIEDRMLKRAFSKLKLEHVVIGKGQFHQERTKTVNRDDMEEEDFLALLRDEETAEDKMIRTDISDEDLEKLLDRSDLIIVNNSDDGKSKSPCSTIPLKGPGWEVVIPNASGGMLSTLNS*
812
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Phac2g02531
811
Coils
Coil
101
121
-
-
Phac2g02531
811
PANTHER
SNF2/RAD54 HELICASE FAMILY
73
743
-
-
Phac2g02531
811
SUPERFAMILY
P-loop containing nucleoside triphosphate hydrolases
472
764
IPR027417
-
Phac2g02531
811
ProSiteProfiles
Superfamilies 1 and 2 helicase C-terminal domain profile.
568
734
IPR001650
-
Phac2g02531
811
Gene3D
-
207
469
IPR038718
-
Phac2g02531
811
Pfam
Helicase conserved C-terminal domain
571
678
IPR001650
-
Phac2g02531
811
ProSiteProfiles
Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile.
251
420
IPR014001
-
Phac2g02531
811
Gene3D
-
476
777
IPR027417
-
Phac2g02531
811
FunFam
ATP-dependent DNA helicase DDM1
233
479
-
-
Phac2g02531
811
Pfam
SNF2-related domain
242
542
IPR000330
GO:0005524|GO:0140658
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Phac2g02531
Phac-Chr2
26589991
26596345
Transposed
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Phac2g02531
225
699
RAD5 or RAD16-like Gene Family
AT3G16600
24.310
7.85e-33
133
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TR
SNF2
Phac2g02531
SNF2_N
3.9e-64
CL0023
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Phac2g02531
K19001
-
gmx:100777687
1323.92
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Phac2g02531
2
26589991
26596345
Phac2g02531
2
26589991
26596345
ECH
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