Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g02472 ATGCATCTCTTTCCCTTCACTCTCGTAATCTTTTTCACCGTTTTGATCCACAACTTCTCTCTGATTCTGGGGCAGCAACCTTATATTGGTTTAGGCACAGTAGCATGCCCTTCAAGTGGTAACAAAAACTCTATTCGTGGTTACACTTGTAATGGTGCAAACAGCTGCCAAGCATTCCTTACTTTCAGATCTCAACCCATTTACAACTCTGTCTCCACAATATCTACTTTATTGGGTTCTGATCCGTCCCAACTTGCTCAAATAAATTCCGTTTCCCTGAATGACACCTTCCAAACAAACAAGTTGGTGCTTGTTCCGGTCAACTGTTCCTGTGCAGGTGAGTATTATCAAACAAACACATCCTATGTATTCCAGAATGCAGAAACTTACTTCTTGATTGCTAATAACACTTTCGAGGGCCTCACAACATGTCAAGCTTTGCAGAACCAAAACCACAACCCAGCAAACATATACCCCGGTAGAAAACTTCTAGTGCCTCTCAGATGTGCTTGTCCCACCAAAAACCAAACCGAGAAAGCCATTAGGTACCTCTTAAGCTACTTGGTGAAGCCGGATGATTTTGTTTCAGTCATCGCTGAGAAATTTGGTGTTGGCACTATGACCACTCTTGAAGCTAATAGCCTCACTTTGGAACAATCCACTATCTATCCCTTTACTACACTTCTAATTCCCCTTCACGATAAGCCCTCAAGTTCTCAAACCGTTTCTCCAGCTCAACTTACGCCACCCCCCTCATCACCCCCCTCTTCTCATCACAAGAAAACATGGGTGTATGCTGTTGTTGGAGCTGTAGCCTTGACATCAGCTCTCTGTGCTGTCATTTTCTTCACACGCTATCGCAAAAATAGAAACAAAGATGAGTCAGCGGTAGTGGCCAAGAATTTTGAGGCAACTAAGAAAAAACCACAAAGGAGGGTAAATAAAAAGTTGTCAGAGATCATATCTGGCATAGCTCAATCGTTCAAGGTGTATGATTTTGAGGAACTAAAGCGAGCAACAGATAACTTTAGTCCTAGCTACTGGATCAAAGGGTCTGTTTATCGCGGTGTGATTAATGGTGATTTGGCAGCAATTAAAAAGATCGAAGGTGATGTGACAAAGGAGATGGAGATACTGAACAAAATCAACCATTCCAATGTTATACGCCTTTCCGGGGTTAGCTTCCACGAGGGGCGTTGGTACCTTGTTTTTGAAGGCTACATGGCTCCCGAGTATTTGGAACATGGTCTTGTATCTACGAAGCTTGATGTGTATGCTTTTGGGGTAGTGATGCTGGAAATGATCACAGGAAAAGAGGTTGCTGCTATTGTAACAGAAGACGAGACAAACTTGTCACATGTTTTACGTGTCATGCTTGGTGAGGAAAGTGGCCAGGAGAGGTTGAAGGCGTTTGTGGATCCCTCTTTGCAAGAAAATTGTCCATTTGAACTTGCTATGTTTGTGATTGAAATGATTGATAATTGCATATCGAGTGATCCAGCAAGTCGTCCTAGTGTGCATGAGATTGTGCAATCTCTGTCAAGAACCCTGAATTCTTCACTGAGTTGGGAAAGGTCAATGAATGTCCCACGAAACTAA 1599 0.4284 MHLFPFTLVIFFTVLIHNFSLILGQQPYIGLGTVACPSSGNKNSIRGYTCNGANSCQAFLTFRSQPIYNSVSTISTLLGSDPSQLAQINSVSLNDTFQTNKLVLVPVNCSCAGEYYQTNTSYVFQNAETYFLIANNTFEGLTTCQALQNQNHNPANIYPGRKLLVPLRCACPTKNQTEKAIRYLLSYLVKPDDFVSVIAEKFGVGTMTTLEANSLTLEQSTIYPFTTLLIPLHDKPSSSQTVSPAQLTPPPSSPPSSHHKKTWVYAVVGAVALTSALCAVIFFTRYRKNRNKDESAVVAKNFEATKKKPQRRVNKKLSEIISGIAQSFKVYDFEELKRATDNFSPSYWIKGSVYRGVINGDLAAIKKIEGDVTKEMEILNKINHSNVIRLSGVSFHEGRWYLVFEGYMAPEYLEHGLVSTKLDVYAFGVVMLEMITGKEVAAIVTEDETNLSHVLRVMLGEESGQERLKAFVDPSLQENCPFELAMFVIEMIDNCISSDPASRPSVHEIVQSLSRTLNSSLSWERSMNVPRN* 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g02472 532 Pfam LysM domain 122 166 IPR018392 -
Phac2g02472 532 Pfam LysM domain 187 231 IPR018392 -
Phac2g02472 532 ProSiteProfiles LysM domain profile. 120 165 IPR018392 -
Phac2g02472 532 SMART LysM_2 186 231 IPR018392 -
Phac2g02472 532 SMART LysM_2 121 166 IPR018392 -
Phac2g02472 532 Gene3D Phosphorylase Kinase; domain 1 288 402 - -
Phac2g02472 532 Pfam Protein kinase domain 406 512 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac2g02472 532 Gene3D LysM domain 185 243 IPR036779 -
Phac2g02472 532 Gene3D Transferase(Phosphotransferase) domain 1 403 519 - -
Phac2g02472 532 ProSiteProfiles LysM domain profile. 185 230 IPR018392 -
Phac2g02472 532 SUPERFAMILY Protein kinase-like (PK-like) 328 515 IPR011009 -
Phac2g02472 532 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 8 405 - -
Phac2g02472 532 MobiDBLite consensus disorder prediction 236 258 - -
Phac2g02472 532 CDD LysM 186 230 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g02472 Phac-Chr2 26150589 26152469 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g02472 406 526 Receptor kinase-like Gene Family AT2G23770 43.443 6.05e-20 91.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Phac2g02472 Pkinase 6e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g02472 - - gmx:100779907 671.389