Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g02449 ATGTCCCAAGATTTTCAACCAGGAATCTTCAGTTTCCCGAATGGGTTGGATAGAGGAAGGGTGAGTCCACAGCAGCAGATCCGGAGGGACAAAGTAAGGTTACAAGGAGAGTTCGAGGCAGCGCCATTGGTAGGGATAGAGGAAGAGGAACCGGTGTACGAGACTGCCGGGATGTTGTCGGAGATGTTCAATTTTCCGCCTACGGCTGCGGCGGAATTGCTGGAGCAGCAGCCTGTGACGGCCACGTTTAGGGCGGCGAGGCAAGTTGGAGAGTGGTACGGAAACAGACAAGGGGTGAATATGATGATGGGTGGATTGGGGGATTCGAAGAACCAAAACGGTGTGAATAACAACCAGCATCAACCACAGCACCAGATTTCAAGCATTAATGCTGACTCAGCAGCTGCCATGCAGCTTTTTCTGATGAACCCTCAAACGAGGTCGCCTTCCCCTCCTCAAACCCACGCCACTCCTTCTTCAACACTCCACATGTTGCTTCCCAATCCTTCTTCCAATTCCCTCCAAGGTTTCACTGGTTCGGCCGTGGGAGGGTCTTTTGGACAATTCACATGGGTTCCTGAGAGTGCTCATCAACAAGGAGGCGTGATGGAAGGGCAAGGTCTTTCGCTGTCGCTGTCTTCTTCACTGGAAGCAGCGAAAGCCGAGGAATTGAGGATGGGGGATAGTGGTTTTCTATTTTACAATCATCAACAAGGTGGTGGTGTTGGAGCTGGTAGTTCTTCTTCTTCCACAGTTCAATTTCCGTACAAGAACAACAGTCATCAACAAGCATTGCATTTGCAAGGGGTGATAGGACACGACAACAACCAACAGGGACATGTTGGGTTCGGGTCATCCTCGTTAGGTGTAGTTAATGTTCTGAGAAATACAAAGTATGTGAAGGCTGCACAAGAGTTGCTTGAAGAGTTTTGCAGTGTTGGGAGGGGTCAGTTTAAGAAGAGCAAGTTGAATAGGCAGAATTCAAACCCTAATTCAAATCCCGATGGTGGTGGTTCTTCGCCTTCCTCAAAAGATGCTGCTATTCCTCCGCCTCCTCCTCCTCTGTCAGCTGCTGATAGGATTGAGCATCAGAGAAGGAAGGTCAAACTTCTATCAATGCTGGACGAGGTGGATAGGAGATACAACCATTACTGCGAGCAGATGCAAATGGTGGTGAATTCATTTGACCTGATGATGGGTTTTGGTGCGGCAGTTCCATACACAGCACTGGCGCAGAAAGCAATGTCTCGGCATTTCCGGTGTCTGAAGGACGCAATAACAGCGCAGCTGAAGCAAAGTTGTGAGCTACTAGGAGAGAAAGAAGGGGCGGGGGCCTCAGGTTTGACCAAGGGTGAGACCCCAAGGCTTAAGGTGCTAGAGCAAAGCCTAAGACAGCAGAGAGCCTTCCACCAGATGGGGATGATGGAACAAGAAGCTTGGCGACCCCAGAGAGGCTTGCCTGAACGATCTGTCAACATTTTGAGAGCTTGGCTTTTCGAACATTTTCTCCATCCGTATCCAAGCGATGCAGATAAGCATCTGTTGGCACGACAGACTGGACTATCGCGAAATCAGGTATCAAACTGGTTCATTAATGCCAGGGTTCGGTTGTGGAAACCCATGGTAGAAGAGATGTACCAACAAGAACTTAAAGAAGCAGAGAATACAGAAGAGAGAGAAAATAACCAAAGCAACAACAGCAATACCAGTGGGAACCAAGCACAAACTCCAAGCACGCCAGGAGCAGCTACAACATCAACAGCAACAACAGCTGCACCACCAACAATTACCACAACAAAGCCAACAGGGAAAAAATCCAATATCAATGCTACCGAAAGCGACTCATCACTTGTTGCAATGAATAGACAAGGCTTCTCAGAAAACCAAGGAAAGCAGTCCACCACCACCTCCACCACTATCATGGCCTCCGTCAGCGCCACCACCTCTGAGATTGCACCACCCGGATCACAGTGCCTCGACTCAGATCTGCCCCCACACAGATTAATGGCCACTGATGACACGTGTCGCTTGGTCACAGCAGATTTTGGGACCACATCTGCAAGTGCTGACATTGGATCCACACTCATTAGATTTGGGACCACAGTTGGTGACGTGTCACTCACCCTAGGGCTTCGCCATGCCGGGAACATGCCAGAGAAAACTCCTTTCTCTGTTAGAGACTTTGGAGCCATTTAA 2196 0.4936 MSQDFQPGIFSFPNGLDRGRVSPQQQIRRDKVRLQGEFEAAPLVGIEEEEPVYETAGMLSEMFNFPPTAAAELLEQQPVTATFRAARQVGEWYGNRQGVNMMMGGLGDSKNQNGVNNNQHQPQHQISSINADSAAAMQLFLMNPQTRSPSPPQTHATPSSTLHMLLPNPSSNSLQGFTGSAVGGSFGQFTWVPESAHQQGGVMEGQGLSLSLSSSLEAAKAEELRMGDSGFLFYNHQQGGGVGAGSSSSSTVQFPYKNNSHQQALHLQGVIGHDNNQQGHVGFGSSSLGVVNVLRNTKYVKAAQELLEEFCSVGRGQFKKSKLNRQNSNPNSNPDGGGSSPSSKDAAIPPPPPPLSAADRIEHQRRKVKLLSMLDEVDRRYNHYCEQMQMVVNSFDLMMGFGAAVPYTALAQKAMSRHFRCLKDAITAQLKQSCELLGEKEGAGASGLTKGETPRLKVLEQSLRQQRAFHQMGMMEQEAWRPQRGLPERSVNILRAWLFEHFLHPYPSDADKHLLARQTGLSRNQVSNWFINARVRLWKPMVEEMYQQELKEAENTEERENNQSNNSNTSGNQAQTPSTPGAATTSTATTAAPPTITTTKPTGKKSNINATESDSSLVAMNRQGFSENQGKQSTTTSTTIMASVSATTSEIAPPGSQCLDSDLPPHRLMATDDTCRLVTADFGTTSASADIGSTLIRFGTTVGDVSLTLGLRHAGNMPEKTPFSVRDFGAI* 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g02449 731 SMART HOX_1 480 544 IPR001356 GO:0003677
Phac2g02449 731 SMART prehox3 288 428 IPR006563 -
Phac2g02449 731 MobiDBLite consensus disorder prediction 1 22 - -
Phac2g02449 731 SUPERFAMILY Homeodomain-like 482 547 IPR009057 -
Phac2g02449 731 MobiDBLite consensus disorder prediction 550 615 - -
Phac2g02449 731 Pfam Associated with HOX 293 427 IPR006563 -
Phac2g02449 731 MobiDBLite consensus disorder prediction 321 360 - -
Phac2g02449 731 MobiDBLite consensus disorder prediction 106 125 - -
Phac2g02449 731 MobiDBLite consensus disorder prediction 321 340 - -
Phac2g02449 731 FunFam BEL1-like homeodomain protein 4 483 545 - -
Phac2g02449 731 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 161 565 - -
Phac2g02449 731 Coils Coil 543 566 - -
Phac2g02449 731 Pfam Homeobox KN domain 497 536 IPR008422 GO:0003677|GO:0006355
Phac2g02449 731 CDD homeodomain 480 541 IPR001356 GO:0003677
Phac2g02449 731 Gene3D - 483 545 - -
Phac2g02449 731 ProSiteProfiles 'Homeobox' domain profile. 477 540 IPR001356 GO:0003677
Phac2g02449 731 MobiDBLite consensus disorder prediction 560 615 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g02449 Phac-Chr2 25966561 25975159 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g02449 288 729 Homeobox Transcription Factor Family AT2G23760 55.020 7.61e-153 458
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Phac2g02449 POX 4.4e-50 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g02449 - - gmx:100786231 1059.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac2g02449 2 25966561 25975159 Phac2g02449 2 25966561 25975159 ECH
Phac3g03947 3 39067887 39076170 Phac2g02449 2 25966561 25975159 ECH
Phac2g02449 2 25966561 25975159 Phac3g03947 3 39067887 39076170 PCT