Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g02444 ATGGAAGTGCTTCCTTGTTCTGGTGTTCAATATGCTGGGGAATCTGATTGCAATCAGCAGAGTTCAGGAACTGCTTTTTTATATCAGGAAGAACCTAATTGTGCTGAAAATAGTGAGCAAGTCAAACTGGTAGCTGCTGCTCAACTGAATGAATCATCACATAAAATGCAAGGGCCTCAGATAGAACGGCAATGTGGTTTGTCAACTAATTCAGATTGTCAATGCATTGGAGCTTCATGTTGTGACTGTCAAGTGGATGATCAAAATGACTATTGTGGTTTACATGATTTTGAAGAAGACATTATAAATGAACCTTGCTTGACATCAGACAACTCTATCTCTGTTGTTGATACAATTGAAAGTGAATCACCAAACAACAGTCGGGAAGGAGACTTGTCATGTTCTGAACCCAAGTGGCTTGAGGGGGATGGATCAGTGGCATTGTGGGTCAAGTGGAGGGGGAAGTGGCAGGCTGGTATCCGGTGTGCAAGGGCTGACTGGCCGTTATCAACGTTGAAAGCAAAACCAACACATGAAAGAAAGAAATATTTTGTTATATTCTTTCCGCACACAAGGATTTATTCTTGGGCTGACATGCTACTTGTTAGATCAATTAATGAGTTTCCCCATCCCATTGCATATAAGACTCATCAGGTGGGGCTGAAAATGGTAAAAGACTTGACTGTTGCACGGCGGTTTATAATGCGTAAGCTAGTTGTTGGCATGCTGAACATGGTCGATCAGTTTCCTTTTAATGCTTTGACAGAAACTGCTCGTGATATGAAGGTCTGGAAGGAGTTTGCCATGGAGGCTTCTCGTTGTAATGGTTATTCTGATTTTGGAAGAATGCTTCTAAAGCTGCATAATAGCATACTACAGCACCATATAAATGTTGACTGGTTACGACATTCTTATCCCTCTTGGACTGAAAGATGTCAGAGTGCAAATAGTGCTGATTCAGTGGAGCTACTGAAGGAGGAATTGTTTGATTCTATTTTGTGGAATGGGATCAATACTCTCTCTGATGCACCAGTGCAATCAACATTAAGTTCTGAATGGAAAACCTGGAAGCATGATGTAGTGAAATGGTTTTTGGCACCACCTTCCTTATCGATCAGCAAAGACATACAGCAACAGAGTTCTGATGATTTGTACCGAGCAAACCTTCAGGTTTGTAGAAAAAGGGCCAAACTTGAAGTTCGTCGAGCAGATACACATGCTTCACAAGTGGAAATCAAGGCCCAAACTATTGCTCTTCAGGCTGACCCTGGCTTCTTTAAGAATCAGGGCACATTGAGCACATTAGCAGCTGAGTCTTGCAAACAGGAAGGTGTCAGGGAGGTGTCAATGGCAAGTGATTTACCTGGTCATTTGGTTGATAAATGGAATGAAATTGTAGTTGAGAGTACTGATCCCCATTTTTTGCATACCAAAGAAATGGAATCAACACCTACAAAGGAAATGACCGTTGCAAAATCTGTTGAATCTGGTAGTAAGAATCGACAATGTATAGCTTATATTGAAGCAAAGGGAAGACAGTGTGTGAGATGGGCAAATGATGGTGATGTGTACTGTTGTGTACATTTATCCTCCCGGTTTTTGGGCAGCTCAACAAAATCTGAAAAGCCTGTTACACTTGATACTCCTATGTGTGAAGGCACTACTGTTCTGGGTACTAGATGTAAGCATCGTGCCCTACCTGGCTCTCTATTCTGTAAGAAACACCGGCCACATGCTGAGACAGAGCAGATCTCAAATATACCGCAGAATACACTAAAGAGGAAACATGAAGAAAATTATACTGGTTCTGAGGGCGTTCTTTCCAGAGACTTGGTATTAGTAAATGTTGAAAGTCCACTGCAAATGGATACAGTGTCATCCATTGGTGGTGATTCCGTACATGGAGAAAACAACTTTAATGAGAAGCCCATGGATTCTGAACATGATCATAATGTAATGGAGTCCCTGCACTGTATGGGTTCCCCTCCCTATGATAAGATGAATCCTTGTAGGGAAGGTCCTAAACGGTATTGCTTGTACTGCGAAAGTCACCTCCCTAGTTGGCTTAAGCGTGCAAGAAATGGTAAGAGTAGAATAGTATCAAAAGAAGTGTTCACGGAACTTTTGAGGGACTGCAACTCATGGGAGCAAAAGGTACATCTGCATAAAGCATGTGAACTTTTTTACAGGCTTCTTAAAAGCATTTTGTCATTAAGAAACCCTGTTCCCAAGGATGTCCAGTTTCAGTGGGCTTTGACTGAAGCCTCTAAAGATTCTAGTGTAGGAGAGTTTTTTAAAAAGTTAGTTCATAATGAAAAGGCCAGAATGAAGTCAATATGGGGATTCAATGATGACATGGATATATTCTCTGTGATGGAAGAACCACCACTCTTGCCATCCACAAACAATGATCACTATGATAAGGAAAATGCCATTAAGTGTAAGCTATGCTCTGCAGAATTTCCTGATGACCAAGAACTTGGTAACCATTGGATGGACAGTCATAAAAAGGAGGCACAGTGGCTGTTTAGAGGCTATGCATGTGCTATTTGTCTGGATTCATTTACTAACAAGAAACTGTTGGAAACACATGTTCAGGAGAGACACCATGTGCAATTTGTTGAACAATGCATGCTTCTCCAGTGCATTCCTTGTGGGAGTCATTTTGGAAATACAGAACAATTATGGCAGCATGTTTTATCAGTTCACCCTGTTGATTTTAAACCATCAAAAGCTCCTGAGCCGCAAACTTTATCTACTGGCGAAGATTCTCCAGTAAAACATGATCCGGGTAATTCAGCCCCTTTGGAGAATAATTCTGAGAATACAGGTGGTTTTCGGAAATTTGTTTGCAGGTTTTGTGGATTGAAATTTGATTTACTACCTGACCTAGGACGACATCACCAAGCTGCTCATATGGGGCCTAATCTGGCAAGCAGTCGCCCTGCAAAGAGAGGAGTTCGATATTATGCGTACAGATTAAAATCTGGCAGACTTAGCCGCCCCAGATTTAAAAAAAGTTTGGCAGCAGCATCATACAGGCTTAGAAATAAGGCTAATGCTAATTTAAAGCGAAGCATTCAGGAAACAAATTCACATGGCACAGGAGGAATAACCATACAACCTCATGTTACTGAAACAACAAACATTGGTAGATTGGAAGAACATCAATGCTCAGCTGTTTCAAAGATTTTGTTTTCAGAGATTCAGAAGACGAAACCTCGGCCAAACAATCTTGATATTTTATCAATTGCCCGCTCTGCTTGCTGCAAAGTTAGTCTGGTTGCATCACTGGAGGAGAAATATGGAATTCTTCCTGAAAAGCTCTATTTGAAGGCAGCAAAACTTTGCAGTGAGCATAATATTTTGGTAAGTTGGCCTCAGGAGGGTTTTATTTGTCCCAGAGGTTGTAATGTATTAAAGGCTCAAGCTTTGCTATCTCCTTTAGATTCTCTTCCTAATAGTTCTGTAATGCCCAAAGCTGTGACTTTATCTGATCCTACAAGTGATGAGTGGGAGGTGGATGAATTTCACTGCATCATCAATTCACGAACTTTAAAGTTAGGTTCACTTCAAAAGGCTGTGGTCTTGTGTGATGACATTAGCTTTGGGAAGGAATCAGTTCCAGTGATTTGTGTAGTAGATCAAGAACTTGCGAATTCTCTCCATATCAATGGCTGTAACGGACCAAATATAAACCCTTCTAGGCCTTGGGAGAGCTTTACCTATGTTACAAAGCCAATGCTTGATCAATCCCTCATTCTTGATTCAGAGAGTCTGCAACTGGGATGTGCCTGTTCATACAGTACCTGCTGTCCTGAAACTTGTGATCATGTGTACCTTTTTGGCAATGACTATGATGATGCAAAAGACATATTTGGGAAACCAATGCGTGGCAGGTTCCCATATGATGAGAATGGTCGAATAATCCTGGAGGAAGGTTATCTTGTCTACGAGTGTAATCACATGTGCAGATGCAATAAATCCTGTCCAAATAGAGTATTGCAGAATGGAGTACGAGTCAAATTGGAAGTCTTTAAAACAGAGAAAAAGGGATGGGCAGTAAGGGCTGGTGAAGCTATTCTACGTGGCACATTTGTGTGTGAATACATTGGAGAAGTTTTAGATGTGAAAGAGGCACATGATAGGCGTAGAAGATATGGCACAGAGCATTGCAGTTATTTCTACAACATTGACGCTCGTGTTAATGATATGAGCAGATTGGTTGAAGGACAGGCTCCATATGTAGTAGATGCTACTAAATTTGGAAATGTTTCAAGATTTGTCAATCATAGTTGCACCCCAAATCTTGTCAATCATCAAGTTCTTGTAGAGAGCATGGATTCTGAACGTGCACATATCGGTTTTTATGCAAATCGAGATATTGCTTTGGGTGAAGAGCTAACATATGACTATCAGTACGAGCTTGTGCTTACAGAAGGATCTCCTTGTCTTTGCGAATCCTTGAAGTGTAGGGGGCGCCTTTATTAG 4491 0.4113 MEVLPCSGVQYAGESDCNQQSSGTAFLYQEEPNCAENSEQVKLVAAAQLNESSHKMQGPQIERQCGLSTNSDCQCIGASCCDCQVDDQNDYCGLHDFEEDIINEPCLTSDNSISVVDTIESESPNNSREGDLSCSEPKWLEGDGSVALWVKWRGKWQAGIRCARADWPLSTLKAKPTHERKKYFVIFFPHTRIYSWADMLLVRSINEFPHPIAYKTHQVGLKMVKDLTVARRFIMRKLVVGMLNMVDQFPFNALTETARDMKVWKEFAMEASRCNGYSDFGRMLLKLHNSILQHHINVDWLRHSYPSWTERCQSANSADSVELLKEELFDSILWNGINTLSDAPVQSTLSSEWKTWKHDVVKWFLAPPSLSISKDIQQQSSDDLYRANLQVCRKRAKLEVRRADTHASQVEIKAQTIALQADPGFFKNQGTLSTLAAESCKQEGVREVSMASDLPGHLVDKWNEIVVESTDPHFLHTKEMESTPTKEMTVAKSVESGSKNRQCIAYIEAKGRQCVRWANDGDVYCCVHLSSRFLGSSTKSEKPVTLDTPMCEGTTVLGTRCKHRALPGSLFCKKHRPHAETEQISNIPQNTLKRKHEENYTGSEGVLSRDLVLVNVESPLQMDTVSSIGGDSVHGENNFNEKPMDSEHDHNVMESLHCMGSPPYDKMNPCREGPKRYCLYCESHLPSWLKRARNGKSRIVSKEVFTELLRDCNSWEQKVHLHKACELFYRLLKSILSLRNPVPKDVQFQWALTEASKDSSVGEFFKKLVHNEKARMKSIWGFNDDMDIFSVMEEPPLLPSTNNDHYDKENAIKCKLCSAEFPDDQELGNHWMDSHKKEAQWLFRGYACAICLDSFTNKKLLETHVQERHHVQFVEQCMLLQCIPCGSHFGNTEQLWQHVLSVHPVDFKPSKAPEPQTLSTGEDSPVKHDPGNSAPLENNSENTGGFRKFVCRFCGLKFDLLPDLGRHHQAAHMGPNLASSRPAKRGVRYYAYRLKSGRLSRPRFKKSLAAASYRLRNKANANLKRSIQETNSHGTGGITIQPHVTETTNIGRLEEHQCSAVSKILFSEIQKTKPRPNNLDILSIARSACCKVSLVASLEEKYGILPEKLYLKAAKLCSEHNILVSWPQEGFICPRGCNVLKAQALLSPLDSLPNSSVMPKAVTLSDPTSDEWEVDEFHCIINSRTLKLGSLQKAVVLCDDISFGKESVPVICVVDQELANSLHINGCNGPNINPSRPWESFTYVTKPMLDQSLILDSESLQLGCACSYSTCCPETCDHVYLFGNDYDDAKDIFGKPMRGRFPYDENGRIILEEGYLVYECNHMCRCNKSCPNRVLQNGVRVKLEVFKTEKKGWAVRAGEAILRGTFVCEYIGEVLDVKEAHDRRRRYGTEHCSYFYNIDARVNDMSRLVEGQAPYVVDATKFGNVSRFVNHSCTPNLVNHQVLVESMDSERAHIGFYANRDIALGEELTYDYQYELVLTEGSPCLCESLKCRGRLY* 1497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g02444 1496 ProSiteProfiles Pre-SET domain profile. 1262 1338 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Phac2g02444 1496 SMART set_7 1341 1479 IPR001214 GO:0005515
Phac2g02444 1496 ProSitePatterns Zinc finger C2H2 type domain signature. 951 972 IPR013087 -
Phac2g02444 1496 Pfam SET domain 1352 1472 IPR001214 GO:0005515
Phac2g02444 1496 Gene3D SET domain 1180 1478 IPR046341 -
Phac2g02444 1496 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUVR5 1 1496 - -
Phac2g02444 1496 Pfam Zinc finger C2H2-type, 3 repeats 848 973 IPR040689 -
Phac2g02444 1496 ProSitePatterns Zinc finger C2H2 type domain signature. 882 903 IPR013087 -
Phac2g02444 1496 ProSitePatterns Zinc finger C2H2 type domain signature. 814 835 IPR013087 -
Phac2g02444 1496 SMART c2h2final6 812 835 IPR013087 -
Phac2g02444 1496 SMART c2h2final6 846 869 IPR013087 -
Phac2g02444 1496 SMART c2h2final6 949 972 IPR013087 -
Phac2g02444 1496 SMART c2h2final6 880 903 IPR013087 -
Phac2g02444 1496 ProSiteProfiles Zinc finger C2H2 type domain profile. 949 977 IPR013087 -
Phac2g02444 1496 Gene3D Classic Zinc Finger 798 872 - -
Phac2g02444 1496 Pfam Pre-SET motif 1202 1333 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Phac2g02444 1496 ProSiteProfiles SET domain profile. 1341 1473 IPR001214 GO:0005515
Phac2g02444 1496 SUPERFAMILY SET domain 1190 1486 IPR046341 -
Phac2g02444 1496 ProSiteProfiles Zinc finger C2H2 type domain profile. 846 869 IPR013087 -
Phac2g02444 1496 MobiDBLite consensus disorder prediction 910 940 - -
Phac2g02444 1496 SMART preset_2 1198 1325 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Phac2g02444 1496 ProSiteProfiles Post-SET domain profile. 1480 1496 IPR003616 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g02444 Phac-Chr2 25928513 25942602 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g02444 129 1495 C2H2 Transcription Factor Family AT2G23740 52.302 0.0 1401
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phac2g02444 Pre-SET 1.7e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g02444 - - gmx:100786757 2709.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac2g02444 2 25928513 25942602 Phac2g02444 2 25928513 25942602 ECH