Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g02426 ATGTTTCTTCGCCACCGTACATATCTCGTTATAGTTCTTACGATCTTGATAGCGTGCACAGCAAGAGCGCAAAACCTCACCTGCAATAGGCAATGCGGGAAGCAGAGTCTTCAGTTCCCTTTCGGGTTCTCCGAAGGTTGTGAAATCAGACTAAACTGTTTCGACAACAAAGTCCAAATTTATGAATTTCTGGTCCAAAACGTTACCAACAGCAACATATTCGTCAACCTCCCTGGAAAATGCAACCGCAGAATGGAATCCATTGAGCCACTTTTCCAAAGCAATTTTGCTCCCTCGGTTAACAACAGCTTTTTGGTGCAAAATTGCAGCGAGGAGTTTGGTGGGTGCGTTATTCCTGCTTCGAATTTTGGGGAAAGCTGCGATAAGAAAAGTGGTAATATCAGTTGCTTTTCGAAACAAGATGGGGCGGATGTTGTGAAATACACAGATTTGAATGAAACTAAGTGTAAGTACTTGTTCTCTGCGATTTCTTTTGGGCAGAGCAATGAGACTGTGCTGCAGTTTCAGGTGGTCGAGTTGGGGTGGTGGCTTCATGGACAGTGTGATGAATGTTCTGACAACGCTACCTGTACACCGGTCCCTCTCCAAGGAGGGTTTCGGTGCCAGTGTATCCATGGCTTCACCGGCGACGGCTTCAGAATGGGCACCGGTTGCCGGAAAACTTCGGCTTCAAGTTGCAGTGCTTCAACACTAACTTCCGGGGGATGTGGAAAAGCAACCAAAATCGGTGTCGCTGTTGGAGCAATCATAGTTGGAGCTTTGGTTGTGGCTGGTCTGTTTCTTCTATGCTACTGTGCTAGGCGCCGTTCTATTTGGTTGGGAAAACATACCAGAGTAAAGCGCCAATTACGTGAAGCTGCAGGCAACTCAAGCATACCTTTCTATCCCTACAAAGAAGTAGAAAAAGCCACAAATTCTTTCTCTGAGAAACACAGGCTGGGAACTGGGGCATTTGGTACAGTTTATGCCGGGAAACTGCACAATGATGAATGGGTTGCTATAAAGAAGTTAAGGCAAAGAGACACCAACAGTGCTGACCAAGTAATGAACGAGATCAAGCTCCTTACTTCAGTGAGTCACCCAAATTTAGTTCGCCTCTTAGGTTGCTGCATTGAGAAGGGAGAACAGATCCTTGTTTATGAATATATGCAAAATGGAACACTTTCACAGCACTTGCAGAGAGAGAGGAGTGAAGGACTACCGTGGACAGTAAGACTTACCATTGCTACTGAAACTGCTAACGCTATAGCATATCTTCATTCCGCAATCCATCCCCCAATTTACCACAGAGACATAAAATCTAGTAATATACTTTTGGATTATCACTTCAAATCAAAGATAGCTGATTTTGGGCTTTCTAGGCTTGGCTTGACAGAAACATCTCATATCTCAACCGCTCCACAAGGGACTCCGGGTTATGTCGATCCCCAATATCACCAGAACTTCCATCTTTCTGATAAAAGTGATGTGTACAGTTTCGGAGTTGTCTTGGTAGAGATAATAACTGCCATGAAAGCGGTTGATTTTTCTCGACCTCGGAGTGAGGTTAACTTAGCTGCACTTGCCGTAGATAGGATTAGGAGGGGTGCTGTAGATGAGATCATAGACCCCTTCCTTGAACCACATAGAGATGCTTGGACACTATATTCTATTCATAAGGTAGCTGAGCTTGCATTTAGATGCCTTGCTTTTCATAGTGACATGAGGCCTACTATGATGGAAGTGGCAGAGGAGCTAGAACACATTAAACGCAGTGGATGGGCAACTATGGAGGAAACTGCCATGGCTTCATCGAATGGGTCCAGTTGTTCATCACCTCGCAATGGAAGTGAGAAGTCCCTGAGTGGTATAAAAAAGGCGGGCCAAGGGAGTGCGAGATTGATAGTTCCGCAGAAGATTGAGAGATTTTTTCATTCTGTGGAGCTGAAGGACAGTTCTCCTGTATCAGTGCATGATCCTATTCATTGGTCGAGTGGACACAGCTCACCTTCGTCAAACAGCTTGTTGGTAAATGTCATCCCCTGA 2046 0.4511 MFLRHRTYLVIVLTILIACTARAQNLTCNRQCGKQSLQFPFGFSEGCEIRLNCFDNKVQIYEFLVQNVTNSNIFVNLPGKCNRRMESIEPLFQSNFAPSVNNSFLVQNCSEEFGGCVIPASNFGESCDKKSGNISCFSKQDGADVVKYTDLNETKCKYLFSAISFGQSNETVLQFQVVELGWWLHGQCDECSDNATCTPVPLQGGFRCQCIHGFTGDGFRMGTGCRKTSASSCSASTLTSGGCGKATKIGVAVGAIIVGALVVAGLFLLCYCARRRSIWLGKHTRVKRQLREAAGNSSIPFYPYKEVEKATNSFSEKHRLGTGAFGTVYAGKLHNDEWVAIKKLRQRDTNSADQVMNEIKLLTSVSHPNLVRLLGCCIEKGEQILVYEYMQNGTLSQHLQRERSEGLPWTVRLTIATETANAIAYLHSAIHPPIYHRDIKSSNILLDYHFKSKIADFGLSRLGLTETSHISTAPQGTPGYVDPQYHQNFHLSDKSDVYSFGVVLVEIITAMKAVDFSRPRSEVNLAALAVDRIRRGAVDEIIDPFLEPHRDAWTLYSIHKVAELAFRCLAFHSDMRPTMMEVAEELEHIKRSGWATMEETAMASSNGSSCSSPRNGSEKSLSGIKKAGQGSARLIVPQKIERFFHSVELKDSSPVSVHDPIHWSSGHSSPSSNSLLVNVIP* 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g02426 681 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Phac2g02426 681 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 11 627 IPR044652 GO:0004672
Phac2g02426 681 CDD EGF_CA 189 217 - -
Phac2g02426 681 ProSiteProfiles EGF-like domain profile. 184 220 IPR000742 -
Phac2g02426 681 SMART serkin_6 314 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac2g02426 681 Gene3D Phosphorylase Kinase; domain 1 285 389 - -
Phac2g02426 681 Gene3D Transferase(Phosphotransferase) domain 1 390 608 - -
Phac2g02426 681 FunFam Wall-associated receptor kinase-like 20 390 599 - -
Phac2g02426 681 FunFam Wall-associated receptor kinase-like 14 282 389 - -
Phac2g02426 681 ProSitePatterns Serine/Threonine protein kinases active-site signature. 434 446 IPR008271 GO:0004672|GO:0006468
Phac2g02426 681 SUPERFAMILY Protein kinase-like (PK-like) 294 587 IPR011009 -
Phac2g02426 681 ProSitePatterns Protein kinases ATP-binding region signature. 320 343 IPR017441 GO:0005524
Phac2g02426 681 Pfam Protein tyrosine and serine/threonine kinase 317 586 IPR001245 GO:0004672|GO:0006468
Phac2g02426 681 ProSiteProfiles Protein kinase domain profile. 314 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac2g02426 681 Gene3D Laminin 182 222 - -
Phac2g02426 681 MobiDBLite consensus disorder prediction 600 623 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g02426 Phac-Chr2 25819477 25824320 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g02426 1 679 Receptor kinase-like Gene Family AT2G23450 55.666 0.0 726
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Phac2g02426 PK_Tyr_Ser-Thr 3.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g02426 - - vum:124829194 1150.96