Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g02411 ATGATCCAAGAACTCTTGGGTGCTGCTACTGCTAGCCTCATAGCAGGAGAAAGAAAATTCTCAATTAATAATGGTGGAGGAGGAGGAGGAGGAGGAGGACTTCTACTAACACCACCCATACCATCTTCTGCTTCTCCATCTCCTTCATGCACAACAACTATCACCACTTCCACTAACACCGCCACTTCGTCCAACTCAGACAACCAAAATTTGAGGTGCCCTCGTTGTGATTCATCAAACACAAAGTTCTGTTACTACAACAACTACAACCTCACTCAGCCTCGCCACTTCTGCAAGACATGTCGCCGGTACTGGACCAAAGGTGGTGCTCTCCGGAATGTTCCCATCGGAGGTGGCTGCAGGAAAAGCAAGAGCTCCGGCATGTCCAACTCGGTGGCAAAGCAAGCAGCCACAAAGATGAAAGCAGTGGCATCAGAGCTTGGAAGGCCACAGGGACTCTTTGATCAAGAGCTTCCACAAACCCCAATCTTGTGGGGTTCACCGCAAAATACTCAACTGATGGCTTTACTGAGAGCTACCCAAAACCAAAATCAAAACCCTAACCCTAGTCCCGTGTCAATTGCTGTCAAGAGAGAAGGGAACTCACTGGGATCTCACTCCCACATGGTCACTGAGCCATTGCTCGCAAATGGGTTGTTGAATAGTACTAGAACTAGTCTAGGCTATGATGGTGTGGGAGAACTTCCTTCACTGGGTCTATGCAGCTCCTTTTGGAGGAATAATCAAGATCAGAATCAGCAACAAAGCAACGGTTTTGTACTTGGAGAACAGCAAAGTGGTGGAGTTCAAGAACTTTACCACAAGCTCAGGTCATCGTCATCAGTTAATTATTGTGGCAGTGATAATTCGCCAGTGTTTCTCGGCAACATGGCTTCTTCCTCTTCTTTGTCCAACATTTTGGAGTCATCTTCAGTTTCTGGCAGCGAATTCGGGTGCTGGAATCCAACCCTTTCCTGGTCTGACCTTCCCACAACAAGTGGAGCATATCCTTAA 1014 0.4744 MIQELLGAATASLIAGERKFSINNGGGGGGGGGLLLTPPIPSSASPSPSCTTTITTSTNTATSSNSDNQNLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKSKSSGMSNSVAKQAATKMKAVASELGRPQGLFDQELPQTPILWGSPQNTQLMALLRATQNQNQNPNPSPVSIAVKREGNSLGSHSHMVTEPLLANGLLNSTRTSLGYDGVGELPSLGLCSSFWRNNQDQNQQQSNGFVLGEQQSGGVQELYHKLRSSSSVNYCGSDNSPVFLGNMASSSSLSNILESSSVSGSEFGCWNPTLSWSDLPTTSGAYP* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g02411 337 MobiDBLite consensus disorder prediction 46 70 - -
Phac2g02411 337 ProSitePatterns Zinc finger Dof-type signature. 73 109 IPR003851 GO:0003677|GO:0006355
Phac2g02411 337 MobiDBLite consensus disorder prediction 32 70 - -
Phac2g02411 337 Pfam Dof domain, zinc finger 69 125 IPR003851 GO:0003677|GO:0006355
Phac2g02411 337 ProSiteProfiles Zinc finger Dof-type profile. 71 125 IPR003851 GO:0003677|GO:0006355
Phac2g02411 337 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 62 264 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g02411 Phac-Chr2 25692332 25695013 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g02411 39 131 C2C2-Dof Transcription Factor Family AT5G65590 62.366 1.91e-34 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Phac2g02411 zf-Dof 2.4e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g02411 - - gmx:778100 502.286