Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g02400 ATGAATCTCTATCCTCTTCTTGTTTACACCTTCCTTCGTTATCACCTCAAATCAGGGTATGGTATGGTAGTTTGTGATTTGTGGGAGCATACTCTCGCTCACAGAAAATCACCCAATCCACCTCCACAACACCACCGCACTTTCATGGAGCTCAGCTTGGACTTGAGTTTGGGCTTTGTCCCCAAACCCATTTCCCTCTTTTTCGCCGAAGTTTCTGCTAACAGAGACAAGCGCGACAAAGTTGCCACGCTTGACGGCTTCGTGCAAAGCTTGGAGGACGAATTGAGGAAAGTTGAGGCCTTCAAACGCGAGCTTCCTCTCTGCATGCTCCTCCTAAACGATGCAATAGCCAGATTGAAGGAGGAAAAAGGAAAGTGTTCAATATCGCAAGATCCACCCACAAGTGAAGAGTTTATGCCACCGAAAACCATTTCTGGGGGAAAAGAAAATGAAAGATGTGAGAAGAAGAATTGGATGAGTTCAGCTCAGCTTTGGAGTACTCAGAAAATCAAATCGAGGAATGAAGAAAGCGATAGGTCTGTGCCAGAGAACCCAATTGATGGGAATTCGTGTGCCCCGAGGAAGGAGGGTTCACAAATTCCGAGCTTTAGTTTGATGGGTCATGCGTCTGAACTGAGTCATAGCAATTCCAAGAGTGTATGTGGAGATACCAGTTCCGGCTCTTCTTTGCTCCGTGTTGAGGTACAGAGCCAGCCACAACCGCCGCAACATATGCAGCAGAATCCTAGGAAACAAAGGCGGTGCTGGTCGCCGGAGCTTCACCGGCGTTTTGTGGATGCTCTTCAACAACTTGGTGGAGCACAAGTGGCCACTCCTAAACAGATTAGAGAACTGATGCAGGTGGAGAGCCTGACAAATGATGAAGTGAAAAGCCATTTGCAAAAGTACAGGCTTCATGTGAGGAGATTCCCAGTTTCATCAGTTGGACAGGCTGATAATGGCTCATGGATGGTCCAAGATCAATGTGGGGATAAATCAAAGGGAAACTTTTCACAGTCTGGTTCTCCTCAAGGTCCTCTCACACCTCTCCTCCTAGGAGGAGGAGGCTCTGCAAAGGGTATCTCAAGCCCTGGACGGAACAGTGTGGATGCAGAAGATGAGCAATCAGATTGCAGGAACTGGAAAGGAGGGCTCCACCAGCACCTTGAAGCTGATAACCAGAGCCTCTAA 1191 0.4803 MNLYPLLVYTFLRYHLKSGYGMVVCDLWEHTLAHRKSPNPPPQHHRTFMELSLDLSLGFVPKPISLFFAEVSANRDKRDKVATLDGFVQSLEDELRKVEAFKRELPLCMLLLNDAIARLKEEKGKCSISQDPPTSEEFMPPKTISGGKENERCEKKNWMSSAQLWSTQKIKSRNEESDRSVPENPIDGNSCAPRKEGSQIPSFSLMGHASELSHSNSKSVCGDTSSGSSLLRVEVQSQPQPPQHMQQNPRKQRRCWSPELHRRFVDALQQLGGAQVATPKQIRELMQVESLTNDEVKSHLQKYRLHVRRFPVSSVGQADNGSWMVQDQCGDKSKGNFSQSGSPQGPLTPLLLGGGGSAKGISSPGRNSVDAEDEQSDCRNWKGGLHQHLEADNQSL* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g02400 396 FunFam Myb family transcription factor 250 308 - -
Phac2g02400 396 MobiDBLite consensus disorder prediction 234 253 - -
Phac2g02400 396 NCBIfam myb-like DNA-binding domain, SHAQKYF class 251 306 IPR006447 GO:0003677
Phac2g02400 396 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 248 308 IPR017930 -
Phac2g02400 396 MobiDBLite consensus disorder prediction 124 201 - -
Phac2g02400 396 MobiDBLite consensus disorder prediction 316 396 - -
Phac2g02400 396 Pfam Myb-like DNA-binding domain 253 304 IPR001005 -
Phac2g02400 396 MobiDBLite consensus disorder prediction 234 254 - -
Phac2g02400 396 Gene3D - 250 307 - -
Phac2g02400 396 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 56 381 IPR044787 GO:0003700|GO:0006355
Phac2g02400 396 MobiDBLite consensus disorder prediction 316 346 - -
Phac2g02400 396 SUPERFAMILY Homeodomain-like 249 309 IPR009057 -
Phac2g02400 396 MobiDBLite consensus disorder prediction 370 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g02400 Phac-Chr2 25632857 25635440 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g02400 49 301 G2-like Transcription Factor Family AT4G37180 43.015 1.06e-51 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Phac2g02400 Myb_DNA-binding 2.5e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g02400 - - pvu:PHAVU_002G021400g 778.859