Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g02394 ATGTCATCATCATCGAATTCGCCGTGCGCGGCGTGCAAGTGTCTGAGGCGAAAGTGCACGCAGGAGTGCGTGTTCGCGCCGTACTTTCCGCCGGACAACCCTCAGAGGTTCGCTTACGTGCACAAGGTTTTCGGGGCTAGCAACGTCGCCAAGCTTCTCAATGAACTCAGCGCCTCGCAGCGAGACGACGCCGTAAAGTCCCTCGCTTACGAGGCCGAGGCTCGTCTCAGGGACCCCGTCTACGGCTGCGTGGGCCTTATCTCCGTCCTCCAACACAAGCTCCGGCAGATCCAGATGGAACTCAACAATGCAAAGAAGGAACTGGCAACATACATCGGTCCCCAAGCTTTTCAAGGCTTACCGGCCCCCATTCTTCAACAGCAGCCCAACAACCTTTTTTCCGGTTCCCTGTATGGCAACATGGCGGGCGTGACGGCAGCCACTCACGGTGGGCAGCTGGTGATTCGCGAAGCCCAGTCGCCACAGCAGCATCAGATCTTGGAGGCCCAGCAGTTGGCCGCGGCTGTGGCGGCCAGGGAGCAGCAGGAGATGTTCAGGAGTTACGAACATCAACAGCAGCAGGAGTTTCTGCGGTTCAGTGGTGGGTTCGATGTGGGTTCGGCTTCTGCTGGTGGGTTCAGCCAGATATCCCCAGTTGCTGCATCCGCTGATCAGTTGTCTCCTTCGTTGGCTTTGGGATCCTTCGATAACGCTTATCACATGCAGCAACCACAAGTGGCAGAGCCTCATCCTCATCCTCACAACATTCCTTTTGAGGCTCAGCTTCTTCTCCCTCCACAACAGAAGCAAACACAGCAACAAACACAGCAGTCCCAACTTCCCCTTCACCAGCCACAGCCTGAAAGCGAGGAGTGTAGGAGTCTTGGTCCAACCTGTTGA 900 0.5667 MSSSSNSPCAACKCLRRKCTQECVFAPYFPPDNPQRFAYVHKVFGASNVAKLLNELSASQRDDAVKSLAYEAEARLRDPVYGCVGLISVLQHKLRQIQMELNNAKKELATYIGPQAFQGLPAPILQQQPNNLFSGSLYGNMAGVTAATHGGQLVIREAQSPQQHQILEAQQLAAAVAAREQQEMFRSYEHQQQQEFLRFSGGFDVGSASAGGFSQISPVAASADQLSPSLALGSFDNAYHMQQPQVAEPHPHPHNIPFEAQLLLPPQQKQTQQQTQQSQLPLHQPQPESEECRSLGPTC* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g02394 299 Coils Coil 87 107 - -
Phac2g02394 299 MobiDBLite consensus disorder prediction 264 285 - -
Phac2g02394 299 Pfam Lateral organ boundaries (LOB) domain 8 105 IPR004883 -
Phac2g02394 299 ProSiteProfiles LOB domain profile. 7 108 IPR004883 -
Phac2g02394 299 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 5 222 - -
Phac2g02394 299 MobiDBLite consensus disorder prediction 264 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g02394 Phac-Chr2 25595308 25598976 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g02394 3 240 AS2 family AT5G66870 50.542 5.11e-75 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Phac2g02394 LOB 4.4e-41 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac2g02394 2 25595308 25598976 Phac2g02394 2 25595308 25598976 ECH