Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g02342 ATGGACGTGGACATACTCAAAACTTCCACGAGTGACACCAGCATGGACATGATGATGATGATGCAAATGGAAAAGTTCCCCGAATTATGTGAACCTTTTTATAACAACACCACTCTTCTCTACCCAGAAAACGAGTTCTTAAGCTCCACCACCACACTACCTGTCTTCTCCAACGATAACCCAAACGTTATATCTCCACCACACACTTTGATCAATCCACCACCACCTTCCTCCAGTTTTGGTCTCCAACAACCCATGACACCTCCTCCTCTTGAACCTAACCCTTCGTTTTCGGAGAAGAAGAATTCCGTGGCTGCCATGAGGGAGATGATTTTCCGCGTAGCAGTCATGCAACCTATTCATATAGACCCTGAGTCTATCAAGCCTCCGAAGAGAAGGAACGTGAAGATTTCGAAGGATCCGCAGAGTGTGGCAGCGAGGCACCGAAGGGAAAGGATAAGCGAACGAATAAGGATCCTTCAGAGATTAGTTCCTGGTGGGACCAAAATGGACACGGCTTCTATGTTGGATGAAGCCATACACTACGTAAAGTTCTTGAAGAAACAAGTGCAGACGCTGGAACAAGCGGGAGCAACTAGACCCTTGAGTGTTTTTGGCTTCCCTGGTACTGTGTCCAACGCCAATAATAACGTTAATTATTCTTCTTTTGTCAAGAGTTGCCAACCGTGCCATATGCTGGGTTCTGCAGCTTCTAAACACATGCTGAGTTGA 732 0.4631 MDVDILKTSTSDTSMDMMMMMQMEKFPELCEPFYNNTTLLYPENEFLSSTTTLPVFSNDNPNVISPPHTLINPPPPSSSFGLQQPMTPPPLEPNPSFSEKKNSVAAMREMIFRVAVMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQTLEQAGATRPLSVFGFPGTVSNANNNVNYSSFVKSCQPCHMLGSAASKHMLS* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g02342 243 CDD bHLH_AtIND_like 138 194 - -
Phac2g02342 243 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 137 186 IPR011598 GO:0046983
Phac2g02342 243 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 141 196 IPR036638 GO:0046983
Phac2g02342 243 Coils Coil 176 196 - -
Phac2g02342 243 Gene3D - 136 201 IPR036638 GO:0046983
Phac2g02342 243 Pfam Helix-loop-helix DNA-binding domain 147 186 IPR011598 GO:0046983
Phac2g02342 243 SMART finulus 143 192 IPR011598 GO:0046983
Phac2g02342 243 MobiDBLite consensus disorder prediction 73 96 - -
Phac2g02342 243 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 60 226 IPR045843 GO:0003700|GO:0006355
Phac2g02342 243 FunFam BHLH transcription factor 140 202 - -
Phac2g02342 243 MobiDBLite consensus disorder prediction 73 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g02342 Phac-Chr2 25126052 25127275 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g02342 23 195 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G67060 56.989 9.12e-52 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phac2g02342 HLH 1.5e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g02342 - - gmx:100796649 353.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac2g02342 2 25126052 25127275 Phac2g02342 2 25126052 25127275 ECH