Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g02320 ATGGAACGGGACTTTGGTGCATTTCTGGCTGTCATTCAACTTTTTGACTCTTCTACAGTTTATTTGGGTGGATATGATAAGGAAGAAAAGGCCGCTAGAGCTTATGATTTGGCAGCTCTAAAGTACTGGGGTCCCACCGCTACCACCAACTTCCCTGTATCCAATTATACAAAGGAATTGGAGGAGATGAAGCATGTTACGAAGCAAGAATTTATTGCATCCCTGCGAAGGAAAAGTAGTGGGTTTTCCAGGGGAGCTTCTATATACAGAGGTGTCACAAGGCATCATCAACAGGGTAGGTGGCAAGCAAGAATTGGCCGGGTAGCTGGAAACAAAGATCTGTACCTGGGAACATTTGCAACTGAAGAGGAGGCAGCGGAGGCATACGATATTGCAGCAATAAAGTTCAGAGGTGCAAATGCAGTAACCAATTTTGAGATGAATAGATATGATGTGGACGCTATAATGAAGAGTTCTCTTCCAGTGGGTGGGGCAGCAAAACGCTTGAAGCTTTCCCTTGAATCAGAGCAGAAAGTTGCTGTGAGCAGCAATCAGCAGAATCCACAGTGTGGAAACGGGAGTGGCAGCATCAATTTCTCGGCCATTCACCAGCCGATTGCTTCAATCCCTTGTGGAATTCCGTTTGATTCTTCAACAGCATATTACCATCACAACCTTTTCCAACATTTTCATCCTTCCAACGCTGGCACAGCAGTGTCCACTGTCACTTCTGCTAATGCAACTGGGCTTAATGCACTGCCTCCTCCAGCAACAACAGCAGCTGAGTTCTTTATTTGGCCTCACCAGTCTTATTGA 816 0.4571 MERDFGAFLAVIQLFDSSTVYLGGYDKEEKAARAYDLAALKYWGPTATTNFPVSNYTKELEEMKHVTKQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATEEEAAEAYDIAAIKFRGANAVTNFEMNRYDVDAIMKSSLPVGGAAKRLKLSLESEQKVAVSSNQQNPQCGNGSGSINFSAIHQPIASIPCGIPFDSSTAYYHHNLFQHFHPSNAGTAVSTVTSANATGLNALPPPATTAAEFFIWPHQSY* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g02320 271 SMART rav1_2 88 152 IPR001471 GO:0003700|GO:0006355
Phac2g02320 271 SMART rav1_2 2 58 IPR001471 GO:0003700|GO:0006355
Phac2g02320 271 ProSiteProfiles AP2/ERF domain profile. 1 52 IPR001471 GO:0003700|GO:0006355
Phac2g02320 271 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 19 188 - -
Phac2g02320 271 SUPERFAMILY DNA-binding domain 87 147 IPR016177 GO:0003677
Phac2g02320 271 CDD AP2 87 146 IPR001471 GO:0003700|GO:0006355
Phac2g02320 271 CDD AP2 20 54 IPR001471 GO:0003700|GO:0006355
Phac2g02320 271 ProSiteProfiles AP2/ERF domain profile. 88 146 IPR001471 GO:0003700|GO:0006355
Phac2g02320 271 FunFam AP2-like ethylene-responsive transcription factor 87 148 - -
Phac2g02320 271 PRINTS Ethylene responsive element binding protein signature 128 148 IPR001471 GO:0003700|GO:0006355
Phac2g02320 271 PRINTS Ethylene responsive element binding protein signature 89 100 IPR001471 GO:0003700|GO:0006355
Phac2g02320 271 Pfam AP2 domain 88 138 IPR001471 GO:0003700|GO:0006355
Phac2g02320 271 SUPERFAMILY DNA-binding domain 6 54 IPR016177 GO:0003677
Phac2g02320 271 Gene3D AP2/ERF domain 88 148 IPR036955 GO:0003700|GO:0006355
Phac2g02320 271 Gene3D AP2/ERF domain 2 54 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g02320 Phac-Chr2 24849573 24854496 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g02320 20 271 AP2-EREBP Transcription Factor Family AT5G65510 69.020 3.55e-103 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Phac2g02320 AP2 8.9e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g02320 K09285 - gmx:100775390 437.187