Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g02300 ATGGCATCACAAGCTGCTGAAGTTGCGCATCCAAGGAAAGCATTCGGATGGGCAGCTAGGGACCCTTCTGGTCTTCTCTCACCTTTCAATTTCTCCAGAAGGGAAACTGCTGAAAAGGACGTGGCATTCAAAGTGTTGTATTGTGGGATATGTCACTCTGACCTCCACATGGCAAAGAACGAATGGGGCTTTTCAACCTATCCACTAGTGCCAGGGCATGAGGTGGTTGGTGTAGTGACACAGGTGGGAAGCAAAGTAGAAAAGTTCAAAGTTGGGGATAGGGTGGGTGTGGGATGCTTGGTTGATTCCTGCCGCACCTGCCAAAACTGTTCAGAAGACCTTGAGAATTATTGTCCACAATATACTCTCACATATGGTGCCAAATATAAAGATGGTACCATCACATATGGAGGTTACTCAGATTCAATGGTTGCAGATGAGCACTTTGTGGTTCGAATTCCAGATGGCTTACCACTTGATGCTGCTGCACCTCTCCTTTGTGCTGGCATCACAGTTTATAGCCCTCTCAGATATTTTGCACTAGACAAGCCTGGTCTGCATGTGGGTGTGGTTGGTCTCGGTGGACTAGGCCATATGGCTGTAAAATTTGCCAAAGCTTTTGGGGCAAAGGTCACAGTAATAAGTACATCACCACACAAAAAGGAGGAAGCAATACAACATCTTGGAGCCGACTCTTTTCTGATAAGCCGTGACCAAGATGAGATGCAGGGTGCCAATGGTACTTTGGATGGTATTATCGACACAGTTTCTGCCATTCATCCTTTGTTACCTCTCATTGGTTTGCTCAAGTCTCATGGAAAGCTTGTAATGGTGGGTGCACCGGAGAAGCCTCTGGAGCTGCCAGTTTTGTCCTTACTTACTGGGAGAAAGATAGTGGCTGGGAGTGCGATTGGAGGAATGAAGGAGACCCAAGAGATGATGGACTTTGCTGCGGAACACAATGTAAAACCAGACATTGAGATCATTCCTATTGATTATGTCAACACTGCAATGGAGCGTCTCCTCAAAGCAGATATAGCTGGTGTGGTGACAGAGGTGGGAGGTAAAGTGGTAAAGTTCAAAGTTGGAGACAAGGTGGGAGTAGGATGCATGGTTGATTCCTGTCACACCTGCCTAAACTGTGTTGACAATCTTGAGAATTATTGTCCACAATACACTCTCACATATAGTGCCAAATATAGAGATGGCACCATCACATATGGAGGCTTCTCTGATTCAATGGTTGTGGATGAACATTTTGTGATTCGCATTCCTGATGGCTTACCACTTGAAGCTGCTGCACCTCTCCTATGTGCTGGGATCACAGTGTTTAGCCCTCTCAGATATTTTGCACTTGATAAGCCTGGTCTAAATGTGGGTGTGGTTGGTCTCGGTGGACTTGGCCATATGGCTGTGAAGTTTGCCAAAGCTTTTGGGGCTAAGGTGACGGTAATAAGTACATCACCCAACAAAAAGGACGAAGCAATGCAACATCTTGGAGCTGACTCCTTTATCATAAGCCGTGACCCAGATCAGATGCAGGCTGCAAATGGTACTTTGGATGGTATTATTGATACGGTTTCTGCCGTTCATCCTCTCTTACCTCTCATTGGTTTGCTCAAGTCTCATGGAAAGCTTGTAGCGGTGGGTGTCCCAGAGAAACCTTTGGAGCTTTCTGTCATTTCACTAATTTTAGGGAGAAAGATAGTGGCTGGGAGTAACATTGGAGGGATGAAGGAGACCCAAGAGATGATGGACTTTGCTGCGGAACACAATGTAAAACCAGACATTGAGATCATTCCTATTGATTATGTCAACACTGCCATGGAGCGTCTCCTCAAAGCAGACGTAAAATATAGATTTGTGATTGACATCGGAAACACACTAAAACCAAGCTCTTGA 1902 0.4564 MASQAAEVAHPRKAFGWAARDPSGLLSPFNFSRRETAEKDVAFKVLYCGICHSDLHMAKNEWGFSTYPLVPGHEVVGVVTQVGSKVEKFKVGDRVGVGCLVDSCRTCQNCSEDLENYCPQYTLTYGAKYKDGTITYGGYSDSMVADEHFVVRIPDGLPLDAAAPLLCAGITVYSPLRYFALDKPGLHVGVVGLGGLGHMAVKFAKAFGAKVTVISTSPHKKEEAIQHLGADSFLISRDQDEMQGANGTLDGIIDTVSAIHPLLPLIGLLKSHGKLVMVGAPEKPLELPVLSLLTGRKIVAGSAIGGMKETQEMMDFAAEHNVKPDIEIIPIDYVNTAMERLLKADIAGVVTEVGGKVVKFKVGDKVGVGCMVDSCHTCLNCVDNLENYCPQYTLTYSAKYRDGTITYGGFSDSMVVDEHFVIRIPDGLPLEAAAPLLCAGITVFSPLRYFALDKPGLNVGVVGLGGLGHMAVKFAKAFGAKVTVISTSPNKKDEAMQHLGADSFIISRDPDQMQAANGTLDGIIDTVSAVHPLLPLIGLLKSHGKLVAVGVPEKPLELSVISLILGRKIVAGSNIGGMKETQEMMDFAAEHNVKPDIEIIPIDYVNTAMERLLKADVKYRFVIDIGNTLKPSS* 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g02300 633 Gene3D - 168 324 - -
Phac2g02300 633 Gene3D - 439 595 - -
Phac2g02300 633 PANTHER ALDEHYDE REDUCTASE 8 346 IPR047109 GO:0016616
Phac2g02300 633 CDD CAD1 346 624 IPR047109 GO:0016616
Phac2g02300 633 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 72 86 IPR002328 GO:0008270|GO:0016491
Phac2g02300 633 FunFam Uncharacterized protein 17 167 - -
Phac2g02300 633 FunFam Putative cinnamyl alcohol dehydrogenase 6 596 625 - -
Phac2g02300 633 Pfam Zinc-binding dehydrogenase 466 589 IPR013149 -
Phac2g02300 633 Pfam Zinc-binding dehydrogenase 195 318 IPR013149 -
Phac2g02300 633 CDD CAD1 15 346 IPR047109 GO:0016616
Phac2g02300 633 Gene3D - 346 625 - -
Phac2g02300 633 Gene3D - 17 345 - -
Phac2g02300 633 FunFam Cinnamyl alcohol dehydrogenase 439 595 - -
Phac2g02300 633 FunFam Cinnamyl alcohol dehydrogenase 168 324 - -
Phac2g02300 633 SUPERFAMILY GroES-like 20 185 IPR011032 -
Phac2g02300 633 SMART PKS_ER_names_mod 24 350 IPR020843 GO:0016491
Phac2g02300 633 Pfam Alcohol dehydrogenase GroES-like domain 39 152 IPR013154 -
Phac2g02300 633 Pfam Alcohol dehydrogenase GroES-like domain 333 423 IPR013154 -
Phac2g02300 633 SUPERFAMILY GroES-like 341 456 IPR011032 -
Phac2g02300 633 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 428 594 IPR036291 -
Phac2g02300 633 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 157 323 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g02300 Phac-Chr2 24607198 24616916 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g02300 345 632 Monolignol Biosynthesis Gene Families AT4G37990 68.750 1.96e-123 368
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g02300 K23232 - gmx:100816901 585.874