Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g02293 ATGGTGGAAGCTCATATGAGGAAACAAGTTCCTCTCCAATGGTGGTTTAGAATGGCTGTGCTTCTTAGCTTAATCTTTTTCGGTGCCTGCTCTGACTCTTCTGAGAGTGTCTCATTTAGAAAAGGTTTGAAGACTGCTCCTCCTCCTTCTCCTGCTGTCAAGCTGAATACCCACAATTTTTCGCAGGTAGTGATTGACAACGGCATAGTTTCCCTCAATTTGTCAAATCCTGGAGGCTATATCATTGGACTATACTATGACGGAGCTAAGAATATCCTTGCTCAAACAAATCATGAAATTGATAGAGGGTACATGGACGTTGTTTGGAACGAATCAGGAAAACCTTCGATGTTTGAGAGAATCCATGGGACAAATTTTTCAGTCATCGAAGCAAGCGATACTTTGGTGGAGGTTTCATTTCTAAAAACATGGAAAGCTTCCCTGGAAGGCTCAAGTGTCCCCATAAACATAGACATAAGATATATATTGCGAAGTGGCGATTCTGGGTTTTATTCATACGCAATATTTACTCGTCCACCAGGATTACCTGCAGTTACTGTTGATCAAATTAGAATTGTTTACAAACTCGACGAAGACAGGTTCCACTATATGGCCATATCTGATACTAGGCAAAGGAAGATGCCAACTGCAGAAGATAGAACAACGGGGCAGGTCCTGGATTATCCTGAAGCTGTTCTCTTGACCCATGCAACTGACCCACAAATTCGAGGAGAGGTTGATGATAAATACCAATACTCGAGTGAGAACAAAGATAACTCTGTTCATGGGTGGATTACAGAGGACGATTCAGCACCCGTGGGTTTCTGGGTGATAACTCCCAGTAATGAGTTCCGCAATGCTGGGCCCACTAAGCAAGACCTCACTTCTCATGTTGGCCCAACTTCTCTTTCCATGTTTACTAGCACTCATTATGCTGGCAAGAAGGTAATCATTGAATTTGATAAAGGGGAGGCTTATAAAAAGGTTTTTGGGCCAATTTTTGTTTACCTTAACTCTTTTCCTATCAAAACTCCGTTCAAGTCTCTGTGGTCAGATGCTGTACAACAGTTATCCAATGAAGAAAAAAAATGGCCTTACGATTTCATTGGATCAAAAGATTTCTTTCCACCCAATCAACGGGGAACGTTGTCAGGAACACTTCAAGTTAAAGATGGGGGAGGGGTGGCTCAACCAGCTAAAAGTTCTTACATTGGTCTAGCTTTACCTGGAGATGCAGGATCATGGCAAACAGAAAGCAAGGGTTATCAATTCTGGACTCAAACTGACAAAGATGGAAGCTTCTCAATTACAAATATTGTACCTGGGAAGTACAACTTGTATGCATGGGTCCCTGGTTTCATAGGAAATTATAAATATCAAATTAATGTTATCAAACAAGGAGACAACATCAACTTGGGTACACTTGTATTCAATCCTCCAAGAAATGGTCCTACTCTATGGGAAATTGGGATCCCAGATAGGTCAGCTGCGGAGTTCTATGTACCAGACCCTAACCCAAAGCTCGTGAACAGATTATACCTAAACGATAGCATAAACGGGTTTAGGCAATACGGCTTGTGGGCACGTTACACTGATTTGTATCCAAAAAATGATCTCATTTTCACAGTCGGTGTTTCTGACTATCACAAGGATTGGTTTTATGCTCAAGTTACCAGGTACATAGGAGAAGGCAAATTCGTGGCAACCACATGGCAGATTCAATTCCAGCTTGAAAATATCATAAAGGGAGGAAACTACACACTGCAATTGGCCCTGGCATCCGCCACTAATTCCCAATTGGAGGTACAATACAAGAATTTGCTTCTTCCATAA 1833 0.4173 MVEAHMRKQVPLQWWFRMAVLLSLIFFGACSDSSESVSFRKGLKTAPPPSPAVKLNTHNFSQVVIDNGIVSLNLSNPGGYIIGLYYDGAKNILAQTNHEIDRGYMDVVWNESGKPSMFERIHGTNFSVIEASDTLVEVSFLKTWKASLEGSSVPINIDIRYILRSGDSGFYSYAIFTRPPGLPAVTVDQIRIVYKLDEDRFHYMAISDTRQRKMPTAEDRTTGQVLDYPEAVLLTHATDPQIRGEVDDKYQYSSENKDNSVHGWITEDDSAPVGFWVITPSNEFRNAGPTKQDLTSHVGPTSLSMFTSTHYAGKKVIIEFDKGEAYKKVFGPIFVYLNSFPIKTPFKSLWSDAVQQLSNEEKKWPYDFIGSKDFFPPNQRGTLSGTLQVKDGGGVAQPAKSSYIGLALPGDAGSWQTESKGYQFWTQTDKDGSFSITNIVPGKYNLYAWVPGFIGNYKYQINVIKQGDNINLGTLVFNPPRNGPTLWEIGIPDRSAAEFYVPDPNPKLVNRLYLNDSINGFRQYGLWARYTDLYPKNDLIFTVGVSDYHKDWFYAQVTRYIGEGKFVATTWQIQFQLENIIKGGNYTLQLALASATNSQLEVQYKNLLLP* 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g02293 610 CDD RGL4_N 56 339 - -
Phac2g02293 610 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 54 605 - -
Phac2g02293 610 SUPERFAMILY Starch-binding domain-like 375 463 IPR013784 GO:0030246
Phac2g02293 610 Pfam Polysaccharide lyase family 4, domain II 401 469 IPR029413 -
Phac2g02293 610 Pfam Rhamnogalacturonate lyase family 50 246 IPR010325 -
Phac2g02293 610 SUPERFAMILY Galactose mutarotase-like 57 342 IPR011013 GO:0003824|GO:0005975|GO:0030246
Phac2g02293 610 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 30 - -
Phac2g02293 610 Pfam Polysaccharide lyase family 4, domain III 485 603 IPR029411 -
Phac2g02293 610 Gene3D - 376 472 - -
Phac2g02293 610 SUPERFAMILY Galactose-binding domain-like 482 601 IPR008979 -
Phac2g02293 610 Gene3D - 55 321 IPR014718 GO:0030246
Phac2g02293 610 CDD RGL4_M 379 475 IPR029413 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g02293 Phac-Chr2 24570708 24576828 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g02293 37 607 Polysaccharide Lyase AT1G09880 51.370 0.0 594
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g02293 K18195 - gmx:100781089 889.797