Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g02274 ATGACTCAAGCCAATGGCCACCATCGTGCTGAAACAGTGATTGACATAAGGAAACCACCGGTGAGCTTCACTGGGGGTCTTGTGTTTGAGTGCCTCACTTACACTGTGACAAAAAAGACGAAGGTGGAGGGGAAGTGGTCGAGTAAAGAAGTGGACTTGCTGCATGATATCAGCAGTTATGCACCAAAGGGTTGCATCACTGCAGTGATGGGTCCTAGTGGTGCAGGAAAGTCCACTCTCTTGGACGGGCTTGCTGGGAGGATTGCTAGTGGAAGCCTTAAAGGGAAGGTCTCATTGGATGGTGCAACTATGAGTGCAAGTTTGATCAAAAGAACTTCTGCATATATCATGCAGGAAGATAGGCTTTTCCCTATGTTAACTGTCTATGAGACTTTCATGTTTGCTGCTGATTTTCGCCTTGGACCACTCTCACTTGCTGATAAGAAACAGAGGGTGGAGAAGCTCATTGATCAGCTTGGCTTAACGTCATCTCGGAACACTTACATAGGAGATGAAGGGACAAGAGGAGTGTCCGGCGGAGAGCGGCGGCGCGTCTCAATCGGCGTGGACATCATCCACGGCCCATCACTGCTGTTCCTGGACGAGCCAACCTCAGGGCTAGACTCCACCAACGCCCACAGCGTGATCGAGAAAGTGCACGACATCGCCCGCAGCGGCAGCACCGTCATCCTCACCATCCACCAGCCCTCCTCCAGAATCCAACTCCTCCTCGACCACCTCATCATCCTCGCACGGGGCCAGCTCATGTTCCAAGGATCGCCGCAAGACGTGGCCCTCCACTTGTCACGCATGCCACGCAAAGTCCCCAAGGGAGAGAACCCCATTGAAAGTCTCATTGACGTGATCCAAGAGTACGATCAGAATGAGGTTGGCGTTGAAGTACTTGCAGAGTTTGCACGCACTGGGGTCAAACCACCTCCTTTGTCTAACCACCAACACTCGCTCTCCACTGTTGCACCCTCTCATGCCCCTTCCTCGCACCTTAGTCACAGGTTTGACGACAAGTCTCTGGACTTTTCTCACTCCTCGCAGGTAAGTAGAAGGGCCGTGGACGAATTCGATCACAGTCTCAGAAGTCCCTATAACAACACTTCCATGTCTTGGAGCACTGGGAACAGTGCACCATTTCTCAAATTCACACCTGCACGGCTTAAGAATGATCACAAGCTCCACAATACCACAAGAAACAATGCTTCAGCTGGCTACTACACATACTCGAGTGAAATCCTTCAAGCGACTCCAACACCCCACAGCAGTGACTACACAGTGAATGAGAATGACTACCTCACTCCATCAAATGGCAAAGAAGAACACCTTGGCCCAAAGTTTGCAAATTCTTACCCAACAGAGATATGGATACTCATTCGCCGCAACTTCATAAACATAAGGCGCACCCCTGAGCTTTTCCTCTCAAGACTGATGGTTCTTACCTTCATGGGGTTCATGATGGCCACCATGTTCCACAACCCTAAACAAGATTTGCAAGGAATCACCAACCGCCTCAGCTTCTTCATCTTCACAGTGTGCCTCTTCTTCTTCTCTTCCAATGATGCCGTCCCAGCCTTCATCCAAGAGAGGTTCATCTTCATAAGGGAAACTTCTCACAATGCTTATAGAGCTTCCACTTACACCATTGCAGGCATAATCACTCACATGCCATTTATTCTTCTCCAAGCAGCTTCGTATGCAGTCATTGTTTGGTTTGCCCTGAAACTTCAAGGCCCTTTTCTTTACTTCTTGCTTGTTCTCTTCGTTTCTCTTCTGTCAACCAATTCATTTGTGGTGTTTGTGAGCTCAGTGGTGCCAAACTACATCTTGGGTTATGCTATGGTTATTGCCTTCACTGCCTTATTCTTCTTGTTCTGCGGATACTTCTTGAACAGCCATGACATTCCCCGTTACTGGCGTTGGATGAACATAATTTCAACGATGACATACCCTTATGAGGGGCTCTTGATGAACCAGTACCAGGTCAATGATACGTTTGGGTATATTGATCAAGTACCCATTAGCGGTTTTCAGATCTTGGATAGTCTACATATCAAGACTGATGGACGTAGGAAGAGGACAGTTGTGCTTATAATGTTTGGTTGGGCTGTGCTATACAGGATTTTATTTTACCTAGTCCTTCGTTTTGCATCAAAAAACCAGAGGTCGTAG 2181 0.4814 MTQANGHHRAETVIDIRKPPVSFTGGLVFECLTYTVTKKTKVEGKWSSKEVDLLHDISSYAPKGCITAVMGPSGAGKSTLLDGLAGRIASGSLKGKVSLDGATMSASLIKRTSAYIMQEDRLFPMLTVYETFMFAADFRLGPLSLADKKQRVEKLIDQLGLTSSRNTYIGDEGTRGVSGGERRRVSIGVDIIHGPSLLFLDEPTSGLDSTNAHSVIEKVHDIARSGSTVILTIHQPSSRIQLLLDHLIILARGQLMFQGSPQDVALHLSRMPRKVPKGENPIESLIDVIQEYDQNEVGVEVLAEFARTGVKPPPLSNHQHSLSTVAPSHAPSSHLSHRFDDKSLDFSHSSQVSRRAVDEFDHSLRSPYNNTSMSWSTGNSAPFLKFTPARLKNDHKLHNTTRNNASAGYYTYSSEILQATPTPHSSDYTVNENDYLTPSNGKEEHLGPKFANSYPTEIWILIRRNFINIRRTPELFLSRLMVLTFMGFMMATMFHNPKQDLQGITNRLSFFIFTVCLFFFSSNDAVPAFIQERFIFIRETSHNAYRASTYTIAGIITHMPFILLQAASYAVIVWFALKLQGPFLYFLLVLFVSLLSTNSFVVFVSSVVPNYILGYAMVIAFTALFFLFCGYFLNSHDIPRYWRWMNIISTMTYPYEGLLMNQYQVNDTFGYIDQVPISGFQILDSLHIKTDGRRKRTVVLIMFGWAVLYRILFYLVLRFASKNQRS* 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g02274 726 ProSitePatterns ABC transporters family signature. 177 191 IPR017871 GO:0005524|GO:0016887
Phac2g02274 726 Gene3D - 39 272 IPR027417 -
Phac2g02274 726 MobiDBLite consensus disorder prediction 314 331 - -
Phac2g02274 726 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 49 265 IPR027417 -
Phac2g02274 726 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 27 277 IPR003439 GO:0005524
Phac2g02274 726 SMART AAA_5 63 261 IPR003593 GO:0016887
Phac2g02274 726 FunFam ABC transporter G family member 6 37 275 - -
Phac2g02274 726 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 25 713 - -
Phac2g02274 726 Pfam ABC-2 type transporter 457 663 IPR013525 GO:0016020|GO:0140359
Phac2g02274 726 Pfam ABC transporter 54 205 IPR003439 GO:0005524
Phac2g02274 726 CDD ABCG_EPDR 27 259 - -
Phac2g02274 726 MobiDBLite consensus disorder prediction 313 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g02274 Phac-Chr2 24433402 24437585 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g02274 47 353 Calmodulin-binding Proteins AT2G36910 25.080 1.24e-10 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g02274 K05681 - gmx:100804809 1219.14