Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g02265 ATGGAGCTTTCTCAACTTGGTTTTCTGGATGAGCTGCTTGCTCCAAGAAAAGACACTTGGGGTGCTTTGTCCACTGGGTTGAATGAGTTACTCCCTTGTGGTTGGAGCTTTGACTCTTTTGATGAGAACCAGGGTTTAGCCACTTTGAATCCCTCATTTGCTGCATTTTCAACACCACTAGACCACAGGTTTGAATGTCCTTATGGAAGTGAAGCAGCCTACCCTTTTGTTGATGAGTTCACATTGCCAGAGCTTGATTCATCATACACCATAAATGATGAGTCGGCACCACTTTTGCCAAAAGAAGATAACCCATCATTGGAGGATGAAGAGCTTGGCTTTCTTGGAAGTGATAACCAGAGTTTGGAACAAGCAAAAAATGGCTGCAAAATTGAGGAACAAGTGACAGAGATTCCAGTCTTCAACATGGGTTTGTGTGCGGAGAAAAAGCTCAAATCCAAAAAGCTAGAAGGGCAGCCCTCAAAGAATCTCATGGCAGAAAGAAGGAGAAGAAAGCGTTTGAATGACCGTCTTTCCATGCTAAGGTCAATAGTCCCCAAGATTAGCAAGATGGACAGGACCTCCATTCTCGGAGACACTATTGATTACATGAAAGAGCTTCTAGAAAGGATAGGTAAGTTGCAAGAAGAAGAAACGGAGGAGGGAACAAATCAGATAAACCTCTTGGGCATTTGTAAGGAGCTAAAGCCAAATGAAGTAATGTTTGATGTTGAGAGAAGAGAGCAGGACACAAGGATTAGCATCTGCTGTGCCACAAAGCCGGGATTACTCCTGTCCACAGTGAACACCCTTGAAGCATTAGGCCTTGAGATTCATCAGTGTGTTATAACCAGCTTCAATGATTTTTCAATGCAAGCATCCTGCTCTGAGGCAGCTGAGCAGAGAAATTGTACGGGCCCGGAAGAGATAAAGCAAGCACTATTCAGAAATGCAGGTTATGGTGGGAGATGTCTGTAG 978 0.4397 MELSQLGFLDELLAPRKDTWGALSTGLNELLPCGWSFDSFDENQGLATLNPSFAAFSTPLDHRFECPYGSEAAYPFVDEFTLPELDSSYTINDESAPLLPKEDNPSLEDEELGFLGSDNQSLEQAKNGCKIEEQVTEIPVFNMGLCAEKKLKSKKLEGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDTIDYMKELLERIGKLQEEETEEGTNQINLLGICKELKPNEVMFDVERREQDTRISICCATKPGLLLSTVNTLEALGLEIHQCVITSFNDFSMQASCSEAAEQRNCTGPEEIKQALFRNAGYGGRCL* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g02265 325 Pfam Helix-loop-helix DNA-binding domain 164 207 IPR011598 GO:0046983
Phac2g02265 325 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 111 319 - -
Phac2g02265 325 CDD ACT_UUR-ACR-like 251 292 - -
Phac2g02265 325 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 161 220 IPR036638 GO:0046983
Phac2g02265 325 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 158 207 IPR011598 GO:0046983
Phac2g02265 325 SMART finulus 164 213 IPR011598 GO:0046983
Phac2g02265 325 Gene3D - 166 238 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g02265 Phac-Chr2 24326775 24329379 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g02265 149 325 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 67.978 2.07e-73 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phac2g02265 HLH 6.8e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g02265 - - gmx:100806571 587.415