Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g02234 ATGGTGACACTTGGGCGTGTCTTTGCGAAAAACTCGGCGTGGGGCATTTGGGTTTCGAGGAAGGCTCGCACTTGCTCACTCTCACTAGCTTTACGTGTTTATCCCCTTTTCTCTTTCTTTTTCTCTCCAGTTCTACCTTCCAAACCAAATCAATTTCAATTCCCCAAACCCCAAAGCCCAATCACCACTCATCAATCACTAACATCAACAACTAGCGTTAGCGAGTGGATGAATCTCTGGACGGACGATAATTCCTCTGTTATGGAGGCTTTCATGTCTTCCCCCGATCTCTCATCCATATGGCCACCTCCGGCGCCGCCGCAATCCGCCGCCGTCTTCAACCAGGACACGCTCCAGCACCGCCTCCAGGCTCTCATCGAGGGCGCCAGAGAGAGCTGGACCTACGCCATCTTTTGGCAGCACTCCTACGACTATTCCGGCTCCGCTCTCCTCGGCTGGGGCGACGGTTACTACAAAGGCGACGATGACAAAGCCAAGGCCAAGGCCAAAGCTAAAGCCACCTCCGCCGCCGAGCAGGACCACCGCAAGAAGGTCCTCCGCGAGCTCAACTCCCTCATCTCCGGCTCTTCCGCTGCCTCCTCCGACGACGTAGACGAGGAGGTAACTGACACCGAGTGGTTCTTCCTCGTCTCCATGACTCAGTCCTTCGTCAACGGCGCCGGCTTGCCCGGCCAGGCCTTCTTCAACTCCAACCCCGTCTGGGTCACCGGAGGCGACCGCCTCTCCGCCTCCCCCTGCGAAAGAGCCCGCCAGGGACAAGTCTTCGGCCTCCAAACCCTAGTCTGCATACCGTCCGCAAACGGCGTCGTTGAGCTGGGGTCTACTGAGCTAATTTACCAGAACCCGGATCTGATGAACAAGGTCAAGGTTCTCTTCAATTTTAGCAACAACAACTTCGATATGGGTTCTTCTTGGCCTGCTACCAGCGCCGATCAAGGAGAAAACGACCCCTCCACGCTCTGGCTCAACGATCCTGAAGTTAGGGATTCAATTAACACTGCCGCAGCTACCCCTTCTGTATCCGTTTCGGTTCCCCCTCATAACAGTACTCACGGAATTTCAAAGACGATGCAGTTGGAAAGTTCTATTCAAACCCCCGGTTCCAGTACCTTAACTGAAACCCCAAGCTCTATCCACGCTGTTCCACAGAACCAGAGCGTGTTCTCCAGAGAATTGAACTTCTCTGAGTACGGTTTTGACCCCAAGAGTGGCAACACTCACAATCAGCATTCCCTGAAGCCCGAATCCTGCGAGATTCTCAGCTTCAGCGACAGCAAGAGAACCTCTTACGGCGGCGGCGGCGGCGGCGGTGTCAATGGTAATTCCAATTCCAATTCAAATTTCTTCTCTGGTCAATCACCGTTTGTTGCTGTTGCGGATGAGAACAACAATAACAACAACGGGAAGAGACGGTCGCCGAATTCGCGAGGCAGCAACGACGATGGAATGCTTTCGTTCACCTCCCGCGCGATTCTTCCTGCAACTAATTTGAAGTCTGCCGGCGGAGGCGATTCCGACCACTCGGATCTGGAAGCGTCGGTGGTAAAGGACCCTGTGGTGGAGCCGGAGAAGCGGCCCCGGAAGAGAGGGCGGAAGCCGGCGAACGGAAGAGAGGAACCGTTGAACCACGTTGAAGCGGAGAGGCAGAGGAGGGAGAAACTGAATCAGAGGTTCTACGCGCTTCGTGCTGTGGTTCCCAACGTGTCCAAGATGGACAAAGCGTCGCTTCTGGGTGACGCCATATCTTACATCACGGAGCTGAAGTCCAAGCTTCAAAACCTAGAATCAGATAAAGATGGATTGCAGAAGCAACTTGAAGGAGTGAAGAAGGAACTCGAGAAATCAAGCGACAACGTTTCGTCTAATCATACGAAACACGGGGGTAATAGTAACATTAAGTCGTCGAATCAGGCGTTGATTGACTTGGACATCGACGTGAAGATTATTGGGTGGGACGCGATGATAAGGATCCAATGCAGCAAGAAGAACCACCCCGCAGCGAGGTTGATGGCGGCGCTGATGGAGTTGGACTTGGACGTACACCACGCCAGCGTATCGGTGGTTAACGATTTGATGATCCAACAAGCGACGGTGAAGATGGGGAGTAGGTTTTACACGCAGGAGCAGCTTCGGTCGGCCCTGTCAGCTAAGGTTGGGGATGTACGATGA 2190 0.5384 MVTLGRVFAKNSAWGIWVSRKARTCSLSLALRVYPLFSFFFSPVLPSKPNQFQFPKPQSPITTHQSLTSTTSVSEWMNLWTDDNSSVMEAFMSSPDLSSIWPPPAPPQSAAVFNQDTLQHRLQALIEGARESWTYAIFWQHSYDYSGSALLGWGDGYYKGDDDKAKAKAKAKATSAAEQDHRKKVLRELNSLISGSSAASSDDVDEEVTDTEWFFLVSMTQSFVNGAGLPGQAFFNSNPVWVTGGDRLSASPCERARQGQVFGLQTLVCIPSANGVVELGSTELIYQNPDLMNKVKVLFNFSNNNFDMGSSWPATSADQGENDPSTLWLNDPEVRDSINTAAATPSVSVSVPPHNSTHGISKTMQLESSIQTPGSSTLTETPSSIHAVPQNQSVFSRELNFSEYGFDPKSGNTHNQHSLKPESCEILSFSDSKRTSYGGGGGGGVNGNSNSNSNFFSGQSPFVAVADENNNNNNGKRRSPNSRGSNDDGMLSFTSRAILPATNLKSAGGGDSDHSDLEASVVKDPVVEPEKRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYITELKSKLQNLESDKDGLQKQLEGVKKELEKSSDNVSSNHTKHGGNSNIKSSNQALIDLDIDVKIIGWDAMIRIQCSKKNHPAARLMAALMELDLDVHHASVSVVNDLMIQQATVKMGSRFYTQEQLRSALSAKVGDVR* 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g02234 729 PANTHER MYC 97 724 IPR045084 GO:0003700|GO:0006355
Phac2g02234 729 Coils Coil 591 625 - -
Phac2g02234 729 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 546 616 IPR036638 GO:0046983
Phac2g02234 729 Gene3D - 537 626 IPR036638 GO:0046983
Phac2g02234 729 SMART finulus 551 600 IPR011598 GO:0046983
Phac2g02234 729 CDD bHLH_AtAIB_like 542 618 - -
Phac2g02234 729 MobiDBLite consensus disorder prediction 516 555 - -
Phac2g02234 729 FunFam Transcription factor bHLH13 538 612 - -
Phac2g02234 729 MobiDBLite consensus disorder prediction 442 491 - -
Phac2g02234 729 MobiDBLite consensus disorder prediction 435 491 - -
Phac2g02234 729 MobiDBLite consensus disorder prediction 616 639 - -
Phac2g02234 729 MobiDBLite consensus disorder prediction 503 555 - -
Phac2g02234 729 Pfam Helix-loop-helix DNA-binding domain 549 594 IPR011598 GO:0046983
Phac2g02234 729 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 118 299 IPR025610 -
Phac2g02234 729 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 545 594 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g02234 Phac-Chr2 24103409 24106599 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g02234 77 726 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G32640 54.545 0.0 638
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phac2g02234 bHLH-MYC_N 9.4e-56 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g02234 K13422 - gmx:100790168 999.579