Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g02233 ATGAATCTCTGGACGGACGATAATTCCTCTGTTATGGAGGCTTTCATGTCTTCCCCCGATCTCTCATCCATATGGCCACCTCCGGCGCCGCCGCAATCCGCCGCCGTCTTCAACCAGGACACGCTCCAGCACCGCCTCCAGGCTCTCATCGAGGGCGCCAGAGAGAGCTGGACCTACGCCATCTTTTGGCAGCACTCCTACGACTATTCCGGCTCCGCTCTCCTCGGCTGGGGCGACGGTTACTACAAAGGCGACGATGACAAAGCCAAGGCCAAGGCCAAAGCTAAAGCCACCTCCGCCGCCGAGCAGGACCACCGCAAGAAGGTCCTCCGCGAGCTCAACTCCCTCATCTCCGGCTCTTCCGCTGCCTCCTCCGACGACGTAGACGAGGAGGTAACTGACACCGAGTGGTTCTTCCTCGTCTCCATGACTCAGTCCTTCGTCAACGGCGCCGGCTTGCCCGGCCAGGCCTTCTTCAACTCCAACCCCGTCTGGGTCACCGGAGGCGACCGCCTCTCCGCCTCCCCCTGCGAAAGAGCCCGCCAGGGACAAGTCTTCGGCCTCCAAACCCTAGTCTGCATACCGTCCGCAAACGGCGTCGTTGAGCTGGGGTCTACTGAGCTAATTTACCAGAACCCGGATCTGATGAACAAGGTCAAGGTTCTCTTCAATTTTAGCAACAACAACTTCGATATGGGTTCTTCTTGGCCTGCTACCAGCGCCGATCAAGGAGAAAACGACCCCTCCACGCTCTGGCTCAACGATCCTGAAGTTAGGGATTCAATTAACACTGCCGCAGCTACCCCTTCTGTATCCGTTTCGGTTCCCCCTCATAACAGTACTCACGGAATTTCAAAGACGATGCAGTTGGAAAGTTCTATTCAAACCCCCGGTTCCAGTACCTTAACTGAAACCCCAAGCTCTATCCACGCTGTTCCACAGAACCAGAGCGTGTTCTCCAGAGAATTGAACTTCTCTGAGTACGGTTTTGACCCCAAGAGTGGCAACACTCACAATCAGCATTCCCTGAAGCCCGAATCCTGCGAGATTCTCAGCTTCAGCGACAGCAAGAGAACCTCTTACGGCGGCGGCGGCGGCGGCGGTGTCAATGGTAATTCCAATTCCAATTCAAATTTCTTCTCTGGTCAATCACCGTTTGTTGCTGTTGCGGATGAGAACAACAATAACAACAACGGGAAGAGACGGTCGCCGAATTCGCGAGGCAGCAACGACGATGGAATGCTTTCGTTCACCTCCCGCGCGATTCTTCCTGCAACTAATTTGAAGTCTGCCGGCGGAGGCGATTCCGACCACTCGGATCTGGAAGCGTCGGTGGTAAAGGACCCTGTGGTGGAGCCGGAGAAGCGGCCCCGGAAGAGAGGGCGGAAGCCGGCGAACGGAAGAGAGGAACCGTTGAACCACGTTGAAGCGGAGAGGCAGAGGAGGGAGAAACTGAATCAGAGGTTCTACGCGCTTCGTGCTGTGGTTCCCAACGTGTCCAAGATGGACAAAGCGTCGCTTCTGGGTGACGCCATATCTTACATCACGGAGCTGAAGTCCAAGCTTCAAAACCTAGAATCAGATAAAGATGGATTGCAGAAGCAACTTGAAGGAGTGAAGAAGGAACTCGAGAAATCAAGCGACAACGTTTCGTCTAATCATACGAAACACGGGGGTAATAGTAACATTAAGTCGTCGAATCAGGCGTTGATTGACTTGGACATCGACGTGAAGATTATTGGGTGGGACGCGATGATAAGGATCCAATGCAGCAAGAAGAACCACCCCGCAGCGAGGTTGATGGCGGCGCTGATGGAGTTGGACTTGGACGTACACCACGCCAGCGTATCGGTGGTTAACGATTTGATGATCCAACAAGCGACGGTGAAGATGGGGAGTAGGTTTTACACGCAGGAGCAGCTTCGGTCGGCCCTGTCAGCTAAGGTTGGGGATGTACGATGA 1962 0.5469 MNLWTDDNSSVMEAFMSSPDLSSIWPPPAPPQSAAVFNQDTLQHRLQALIEGARESWTYAIFWQHSYDYSGSALLGWGDGYYKGDDDKAKAKAKAKATSAAEQDHRKKVLRELNSLISGSSAASSDDVDEEVTDTEWFFLVSMTQSFVNGAGLPGQAFFNSNPVWVTGGDRLSASPCERARQGQVFGLQTLVCIPSANGVVELGSTELIYQNPDLMNKVKVLFNFSNNNFDMGSSWPATSADQGENDPSTLWLNDPEVRDSINTAAATPSVSVSVPPHNSTHGISKTMQLESSIQTPGSSTLTETPSSIHAVPQNQSVFSRELNFSEYGFDPKSGNTHNQHSLKPESCEILSFSDSKRTSYGGGGGGGVNGNSNSNSNFFSGQSPFVAVADENNNNNNGKRRSPNSRGSNDDGMLSFTSRAILPATNLKSAGGGDSDHSDLEASVVKDPVVEPEKRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYITELKSKLQNLESDKDGLQKQLEGVKKELEKSSDNVSSNHTKHGGNSNIKSSNQALIDLDIDVKIIGWDAMIRIQCSKKNHPAARLMAALMELDLDVHHASVSVVNDLMIQQATVKMGSRFYTQEQLRSALSAKVGDVR* 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g02233 653 MobiDBLite consensus disorder prediction 440 479 - -
Phac2g02233 653 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 470 540 IPR036638 GO:0046983
Phac2g02233 653 Gene3D - 461 550 IPR036638 GO:0046983
Phac2g02233 653 Pfam Helix-loop-helix DNA-binding domain 473 518 IPR011598 GO:0046983
Phac2g02233 653 PANTHER MYC 21 648 IPR045084 GO:0003700|GO:0006355
Phac2g02233 653 MobiDBLite consensus disorder prediction 366 415 - -
Phac2g02233 653 CDD bHLH_AtAIB_like 466 542 - -
Phac2g02233 653 MobiDBLite consensus disorder prediction 427 479 - -
Phac2g02233 653 SMART finulus 475 524 IPR011598 GO:0046983
Phac2g02233 653 Coils Coil 515 549 - -
Phac2g02233 653 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 469 518 IPR011598 GO:0046983
Phac2g02233 653 MobiDBLite consensus disorder prediction 359 415 - -
Phac2g02233 653 FunFam Transcription factor bHLH13 462 536 - -
Phac2g02233 653 MobiDBLite consensus disorder prediction 540 563 - -
Phac2g02233 653 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 42 223 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g02233 Phac-Chr2 24103409 24106599 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g02233 1 650 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G32640 54.545 0.0 640
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phac2g02233 bHLH-MYC_N 7.7e-56 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g02233 K13422 - gmx:100790168 998.038