Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phac2g02232 | ATGGCCTCAGATGCTTGCAATGACAAGAACATCGTGTTTCGGAAACTCAAGGCAAAGTCTGAAAACAAGATGTGTTTCGATTGTAATGCAAAAAATCCAACTTGGGCCTCCGTCACCTATGGGATCTTCCTCTGCATCGATTGTTCCGCTGCACATCGCAGTCTCGGTGTCCATGTCAGTTTTGTCAGATCTACAAATTTAGACATGTGGAGTCCGGAACAATTGAAAACTATGAGCTTGGGAGGAAACAATCGTGCGCGAAATTTCTTCAAGCAGCATGGTTGGACTGATGGTGGTAAAACAGATGCCAAATATACATCAAGAGCTGCAGAGTTATATAAACAAATTCTTTCTAAGGAAGTAGCTAAAAGTATGACTGAAAAAGAGCTAGATTCACCATCATCACCAACTGCTTCTCCGTTTGAACAAGTTGTTGAAGGACTTCCTCAACTAAAGACTAATGAATTGCCAAACGAAAATGCTTCGCAAAATCCTGGAATTCCAGAAAGCACTTCTTCACCTAAAGCTTCACACACAACAGTTTCTAATACTGGCAAAAAAACAATTTGCGCTAAGAAACCTAGAAAAGCTGCGGGACTTGGTGCTAGAAAGCTTACTAAAAAGTCATGTGAATCTCTCTACGAGCAAAAACCAGAAGAACCACCAACTTTAGTTACTTCCGCACCAAAGAAGAATACACTTTCAGGGTCATCTTCTACATCTCGATTTGACTATATAGAAAATGACCAATCATCTGATTTGAAGTCTAAAGGTAAGGGTCACTTAGTTAGGCATGCGTCTTTACCAGAGTCATCAAGCTTCTTTGCAGACTTCGAAATGGATTGTGGTTTTCCAAAGGAATTTGCGTCAAATTCATCAAAAGAGAAAGTTCAGGAGTCCGATGAAGCTAGAAGGAAGTTCTCAAATGCTAAGTCAATTTCTTCATCTCAATTTTTTGGAGATCGAAACAAAGATGCAAATGATTCACAAGTTACTCTGTCAAAATTTTCAGATTCAACTTCAATTTCTAGTGCCGAATTTTTTGGTAACAACTCTTCCAGTGATCTTGATGCTAATGACCTCCTTAATCGACTATCTTTCCGTGCTCATGAAGACATTTCTTCTCTTAAAAATATTGCTGGAGAGACTGGAAAGAAACTCAGTTTCTTGGCCTCCAATTTGATAACAGATATTCAGGATAGAATAATCTAA | 1212 | 0.3894 | MASDACNDKNIVFRKLKAKSENKMCFDCNAKNPTWASVTYGIFLCIDCSAAHRSLGVHVSFVRSTNLDMWSPEQLKTMSLGGNNRARNFFKQHGWTDGGKTDAKYTSRAAELYKQILSKEVAKSMTEKELDSPSSPTASPFEQVVEGLPQLKTNELPNENASQNPGIPESTSSPKASHTTVSNTGKKTICAKKPRKAAGLGARKLTKKSCESLYEQKPEEPPTLVTSAPKKNTLSGSSSTSRFDYIENDQSSDLKSKGKGHLVRHASLPESSSFFADFEMDCGFPKEFASNSSKEKVQESDEARRKFSNAKSISSSQFFGDRNKDANDSQVTLSKFSDSTSISSAEFFGNNSSSDLDANDLLNRLSFRAHEDISSLKNIAGETGKKLSFLASNLITDIQDRII* | 404 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phac2g02232 | 403 | MobiDBLite | consensus disorder prediction | 154 | 244 | - | - | |
Phac2g02232 | 403 | FunFam | ADP-ribosylation factor GTPase-activating protein AGD10 | 1 | 138 | - | - | |
Phac2g02232 | 403 | SMART | arf_gap_3 | 10 | 126 | IPR001164 | GO:0005096 | |
Phac2g02232 | 403 | Gene3D | Arf GTPase activating protein | 1 | 138 | IPR038508 | - | |
Phac2g02232 | 403 | MobiDBLite | consensus disorder prediction | 289 | 308 | - | - | |
Phac2g02232 | 403 | CDD | ArfGap_ArfGap2_3_like | 8 | 123 | - | - | |
Phac2g02232 | 403 | MobiDBLite | consensus disorder prediction | 292 | 308 | - | - | |
Phac2g02232 | 403 | PANTHER | ADP-RIBOSYLATION FACTOR GTPASE ACTIVATING PROTEIN 3, ISOFORM H-RELATED | 7 | 402 | - | - | |
Phac2g02232 | 403 | PRINTS | HIV Rev interacting protein signature | 62 | 83 | IPR001164 | GO:0005096 | |
Phac2g02232 | 403 | PRINTS | HIV Rev interacting protein signature | 41 | 58 | IPR001164 | GO:0005096 | |
Phac2g02232 | 403 | PRINTS | HIV Rev interacting protein signature | 22 | 41 | IPR001164 | GO:0005096 | |
Phac2g02232 | 403 | ProSiteProfiles | ARF GTPase-activating proteins domain profile. | 10 | 128 | IPR001164 | GO:0005096 | |
Phac2g02232 | 403 | MobiDBLite | consensus disorder prediction | 226 | 244 | - | - | |
Phac2g02232 | 403 | MobiDBLite | consensus disorder prediction | 154 | 187 | - | - | |
Phac2g02232 | 403 | Pfam | Putative GTPase activating protein for Arf | 12 | 114 | IPR001164 | GO:0005096 | |
Phac2g02232 | 403 | SUPERFAMILY | ArfGap/RecO-like zinc finger | 12 | 125 | IPR037278 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phac2g02232 | Phac-Chr2 | 24076375 | 24080743 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Phac2g02232 | 13 | 91 | C2H2 Transcription Factor Family | AT4G21160 | 43.750 | 7.62e-19 | 85.1 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Phac2g02232 | K12493 | K11855 | gmx:100785169 | 553.132 |