Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g02232 ATGGCCTCAGATGCTTGCAATGACAAGAACATCGTGTTTCGGAAACTCAAGGCAAAGTCTGAAAACAAGATGTGTTTCGATTGTAATGCAAAAAATCCAACTTGGGCCTCCGTCACCTATGGGATCTTCCTCTGCATCGATTGTTCCGCTGCACATCGCAGTCTCGGTGTCCATGTCAGTTTTGTCAGATCTACAAATTTAGACATGTGGAGTCCGGAACAATTGAAAACTATGAGCTTGGGAGGAAACAATCGTGCGCGAAATTTCTTCAAGCAGCATGGTTGGACTGATGGTGGTAAAACAGATGCCAAATATACATCAAGAGCTGCAGAGTTATATAAACAAATTCTTTCTAAGGAAGTAGCTAAAAGTATGACTGAAAAAGAGCTAGATTCACCATCATCACCAACTGCTTCTCCGTTTGAACAAGTTGTTGAAGGACTTCCTCAACTAAAGACTAATGAATTGCCAAACGAAAATGCTTCGCAAAATCCTGGAATTCCAGAAAGCACTTCTTCACCTAAAGCTTCACACACAACAGTTTCTAATACTGGCAAAAAAACAATTTGCGCTAAGAAACCTAGAAAAGCTGCGGGACTTGGTGCTAGAAAGCTTACTAAAAAGTCATGTGAATCTCTCTACGAGCAAAAACCAGAAGAACCACCAACTTTAGTTACTTCCGCACCAAAGAAGAATACACTTTCAGGGTCATCTTCTACATCTCGATTTGACTATATAGAAAATGACCAATCATCTGATTTGAAGTCTAAAGGTAAGGGTCACTTAGTTAGGCATGCGTCTTTACCAGAGTCATCAAGCTTCTTTGCAGACTTCGAAATGGATTGTGGTTTTCCAAAGGAATTTGCGTCAAATTCATCAAAAGAGAAAGTTCAGGAGTCCGATGAAGCTAGAAGGAAGTTCTCAAATGCTAAGTCAATTTCTTCATCTCAATTTTTTGGAGATCGAAACAAAGATGCAAATGATTCACAAGTTACTCTGTCAAAATTTTCAGATTCAACTTCAATTTCTAGTGCCGAATTTTTTGGTAACAACTCTTCCAGTGATCTTGATGCTAATGACCTCCTTAATCGACTATCTTTCCGTGCTCATGAAGACATTTCTTCTCTTAAAAATATTGCTGGAGAGACTGGAAAGAAACTCAGTTTCTTGGCCTCCAATTTGATAACAGATATTCAGGATAGAATAATCTAA 1212 0.3894 MASDACNDKNIVFRKLKAKSENKMCFDCNAKNPTWASVTYGIFLCIDCSAAHRSLGVHVSFVRSTNLDMWSPEQLKTMSLGGNNRARNFFKQHGWTDGGKTDAKYTSRAAELYKQILSKEVAKSMTEKELDSPSSPTASPFEQVVEGLPQLKTNELPNENASQNPGIPESTSSPKASHTTVSNTGKKTICAKKPRKAAGLGARKLTKKSCESLYEQKPEEPPTLVTSAPKKNTLSGSSSTSRFDYIENDQSSDLKSKGKGHLVRHASLPESSSFFADFEMDCGFPKEFASNSSKEKVQESDEARRKFSNAKSISSSQFFGDRNKDANDSQVTLSKFSDSTSISSAEFFGNNSSSDLDANDLLNRLSFRAHEDISSLKNIAGETGKKLSFLASNLITDIQDRII* 404
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Phac2g02232 403 MobiDBLite consensus disorder prediction 154 244 - -
Phac2g02232 403 FunFam ADP-ribosylation factor GTPase-activating protein AGD10 1 138 - -
Phac2g02232 403 SMART arf_gap_3 10 126 IPR001164 GO:0005096
Phac2g02232 403 Gene3D Arf GTPase activating protein 1 138 IPR038508 -
Phac2g02232 403 MobiDBLite consensus disorder prediction 289 308 - -
Phac2g02232 403 CDD ArfGap_ArfGap2_3_like 8 123 - -
Phac2g02232 403 MobiDBLite consensus disorder prediction 292 308 - -
Phac2g02232 403 PANTHER ADP-RIBOSYLATION FACTOR GTPASE ACTIVATING PROTEIN 3, ISOFORM H-RELATED 7 402 - -
Phac2g02232 403 PRINTS HIV Rev interacting protein signature 62 83 IPR001164 GO:0005096
Phac2g02232 403 PRINTS HIV Rev interacting protein signature 41 58 IPR001164 GO:0005096
Phac2g02232 403 PRINTS HIV Rev interacting protein signature 22 41 IPR001164 GO:0005096
Phac2g02232 403 ProSiteProfiles ARF GTPase-activating proteins domain profile. 10 128 IPR001164 GO:0005096
Phac2g02232 403 MobiDBLite consensus disorder prediction 226 244 - -
Phac2g02232 403 MobiDBLite consensus disorder prediction 154 187 - -
Phac2g02232 403 Pfam Putative GTPase activating protein for Arf 12 114 IPR001164 GO:0005096
Phac2g02232 403 SUPERFAMILY ArfGap/RecO-like zinc finger 12 125 IPR037278 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Phac2g02232 Phac-Chr2 24076375 24080743 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g02232 13 91 C2H2 Transcription Factor Family AT4G21160 43.750 7.62e-19 85.1
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g02232 K12493 K11855 gmx:100785169 553.132