Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g02217 ATGGCTACTATAGAATCTGCCCTCACCCTGTTCGCACCTCAACGATTTTCGGATAACTATCGTTCATCTGCAAAACCCCCTCACTCCATTAAGCTCCATGATTCCACTTCCCTTTTTTTCTCTTCCAATGCCTCCTTCAAAACTGCAAGACTCTGCTTACGGCTATGCTCTGCTCTGCAAGAGCTACCCACAACAGAGAAAACACCTGGCCCAACCCAACCAACTGACAACCTCACCAAGCTCTACGTCGCTAACTTGTCTTGGTCTCTGTCGCCGGCTGACATCAAGGGCATATTTGCCCAATGTGGAACCGTAACAGACGTCGAGATAATAAGGAACAAAAAAGGGAGGCACATGGGATATGCCTTCGTTACTATGGATTCCGGGGAAGAGGCTCAGGTTGCTGTTGATAAATTTGACTCATATGAGTTATCAGGACGGATAATAAGGGTAGAGCTTGCAAAGACATTCAAGAAACCTCCTCCTTCTCCTCCTCCACCTCCTCCACCTCCTCAAAGTCGTTCCCCTAGAGAGACACGTCATGTACTTTATGTATCCAACCTTGCATGGAAAGCAAGATCTACCCATCTCAGGCAAGTCTTCACCGAAAATTTCAAAACACCAGTTTCAGCCAGGGTTGTCTTTGATAGCCCTGCTAAACGATCAGCTGGGTACGGATTTGTTTCTTTTCTTACTAAGGAGGATGCAGAGGCTGCCATTTCTAATGTGGATGGGAAGGAGATAATGGGACGACCGCTTCGCCTAAGCTTCAGTGAAAAGAAAGATAATGAAGCTGGAAGTGAAAAAGAGGAAGACCAAATTAAAGATGCTGGAAGTGAAGATGAAGACCAAGGTTCTGTTGCTCAACCAGAAGAGTCATAA 882 0.4603 MATIESALTLFAPQRFSDNYRSSAKPPHSIKLHDSTSLFFSSNASFKTARLCLRLCSALQELPTTEKTPGPTQPTDNLTKLYVANLSWSLSPADIKGIFAQCGTVTDVEIIRNKKGRHMGYAFVTMDSGEEAQVAVDKFDSYELSGRIIRVELAKTFKKPPPSPPPPPPPPQSRSPRETRHVLYVSNLAWKARSTHLRQVFTENFKTPVSARVVFDSPAKRSAGYGFVSFLTKEDAEAAISNVDGKEIMGRPLRLSFSEKKDNEAGSEKEEDQIKDAGSEDEDQGSVAQPEES* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g02217 293 MobiDBLite consensus disorder prediction 155 177 - -
Phac2g02217 293 CDD RRM_SF 81 152 - -
Phac2g02217 293 Gene3D - 56 160 IPR012677 -
Phac2g02217 293 SMART rrm1_1 80 152 IPR000504 GO:0003723
Phac2g02217 293 SMART rrm1_1 182 256 IPR000504 GO:0003723
Phac2g02217 293 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 81 149 IPR000504 GO:0003723
Phac2g02217 293 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 183 254 IPR000504 GO:0003723
Phac2g02217 293 MobiDBLite consensus disorder prediction 158 175 - -
Phac2g02217 293 MobiDBLite consensus disorder prediction 251 293 - -
Phac2g02217 293 Gene3D - 161 275 IPR012677 -
Phac2g02217 293 SUPERFAMILY RNA-binding domain, RBD 161 263 IPR035979 GO:0003676
Phac2g02217 293 MobiDBLite consensus disorder prediction 253 282 - -
Phac2g02217 293 PANTHER OS02G0815200 PROTEIN 38 260 - -
Phac2g02217 293 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 79 156 IPR000504 GO:0003723
Phac2g02217 293 SUPERFAMILY RNA-binding domain, RBD 71 171 IPR035979 GO:0003676
Phac2g02217 293 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 181 260 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g02217 Phac-Chr2 23886964 23891174 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g02217 71 286 Eukaryotic Initiation Factors Gene Family AT1G49760 25.000 1.79e-11 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g02217 - - vum:124843240 488.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac2g02217 2 23886964 23891174 Phac2g02217 2 23886964 23891174 ECH