Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g02215 ATGCAAATAAACAACTATGTCTTCATCGAAATCAAAGCAGAGAACTCCTCCGAAGTGCTACCGCCGCCACCACCGTCGGAAATCACCCCGTCGACTATAGTATTCTTTACCATCGCAGTGGCCGTCTTCTGCTCCGTTGGTTTCACCGTGGTCTTCTTCTGCAGGTGCTGTTTCGGGAACCTCTCCCGCACTAGCACCCTCGTCCGTCTCTCTCCCCATGCTTCTCCCTACAGAGGCCTCGACCCTTCTCTGCTAAGCGCGTTCCCCACGTTTCTCTACGCCACCGTGAAGGATCTCCGCAAGGAGAAAAAGTACTCCCTCGAATGCGGCATTTGCTTGCTGGAGTTCGACGACGACAGCGTGCTGCGTCTCTTAACCGGGTGCTGCCACGTGTTCCACCGGGAGTGCATCGACCTGTGGCTCCGCTCGCACAAGACTTGCCCATTTTGCCGCACGGATCTCGAGACACCGGCGAGTAACGTGCAGAAACCTCACGAGCAAAACGAGGAGAATATGGAACAAGAGAGGATCGATCACATGAGCGTTGATGTGAAAGAAGGCGATGGAGATGAGAGAGATAATGATGGTGATGAGGTAGGTTTGATGAATGTGGGCATGCAGCGAAACATGTTTGCAAGTGCACGTTCACACTCAACTGGGCATTCCATAGTTATGGTTAGAGAAGGAGATAAAGAAAGAGATGATGATGATAATAAATACACTCTGAGATTGCCCCAACATGTTAAAATTGTAAGAGGGCACCATTATTCTAAGAGTTGTTCAACTTACAAAGACATGGCAAGGCGTTCTGCACCTTGTACTAACTGTGGTTATGTTAAAATTGGTAGCCCCAGTAATATGGTGTAA 867 0.496 MQINNYVFIEIKAENSSEVLPPPPPSEITPSTIVFFTIAVAVFCSVGFTVVFFCRCCFGNLSRTSTLVRLSPHASPYRGLDPSLLSAFPTFLYATVKDLRKEKKYSLECGICLLEFDDDSVLRLLTGCCHVFHRECIDLWLRSHKTCPFCRTDLETPASNVQKPHEQNEENMEQERIDHMSVDVKEGDGDERDNDGDEVGLMNVGMQRNMFASARSHSTGHSIVMVREGDKERDDDDNKYTLRLPQHVKIVRGHHYSKSCSTYKDMARRSAPCTNCGYVKIGSPSNMV* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g02215 288 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 68 158 IPR013083 -
Phac2g02215 288 ProSiteProfiles Zinc finger RING-type profile. 109 151 IPR001841 -
Phac2g02215 288 SUPERFAMILY RING/U-box 102 160 - -
Phac2g02215 288 SMART ring_2 109 150 IPR001841 -
Phac2g02215 288 FunFam E3 ubiquitin-protein ligase ATL6 68 157 - -
Phac2g02215 288 PANTHER RING FINGER DOMAIN-CONTAINING 26 160 - -
Phac2g02215 288 Pfam Ring finger domain 108 151 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g02215 Phac-Chr2 23876747 23877856 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g02215 4 249 C3H Transcription Factor Family AT2G34990 31.395 6.49e-33 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g02215 - - vum:124842333 389.037