Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g02209 ATGGGTAGATCACCGTGTCGTGAGGAGATTAGGGGTGTAAAGAAAGGACCATGGACACCAGAAGAAGATGAGAAGCTGATTGATTATATCAGTAAACACTGCCATGGCAGTTGGAGAACACTTCCAAAGCGTGCAGGGCTCAATAGATGTGGTAAGAGTTGCAGATTAAGGTGGACAAACTATCTGAGGCCTGATATCAAGAGAGGCCAATTCACTGAAGAAGATGAGAGAATTATCATCAACCTTCATTCAGTTCTCGGAAACAAGTGGTCGAAGATTGCAGCTCATCTACCTGGACGAACTGATAATGAGATCAAGAATTATTGGAACACTCACATAAGGAAAAAGCTTCTAAAGATGGGTATTGATCCAGAAACTCACAAGCCAAGGACAGACTTGAATCACCTCATGAGTCTTTCTCAGTTGCTTGGCATGTCAAACTTGAGCAGTGTTACGAGTACAACTTGGGGCAGTAACCATCTTGGTTTACAACCAGATATCACTCAGCTAGCCAAAATACAACTGCTGCAAAATCTTTTGCAACTTATGAACAGCAGTTCGTTTGTTAACATGGGTAACCCTTACCTCTTAGGGAATCTCAACCCTTCATTTCTGAACGGCACAAACCCCTTCCAAACTAAGGAGCCTATGGTGTTGAGTGGTAGTGAAAGATTTGTTAACCCTAGTGTGTACTCTCAAGCACATAGTGAGTGCTCTCAGCAGCAGGATGTTTCAAAATCATTGGCAGATGCGGAGGGTGGATCCATTCCACAGGATCTTGATTACAACAAAATTAGCAGCACTAATCATTCACGTGAAAATCAAGAAGAAAACCCTCTTCCTGCATTAGTTTCTGCCTCCCCGAGGATGGGAACCTTCAACCAAATAGACAGTTGTGGTAACTTAGCACAAACGAGCACAGAGTCACCTTCCAACACATTCTTTGATGATTGGGAGAAGTTGCTTGATGATGAAAGAAGCGATTCCTATTGGAAAGAGATTCTAGACTTTACATCCACTTCTGCGTCACCGATTATGTGGTAG 1044 0.4291 MGRSPCREEIRGVKKGPWTPEEDEKLIDYISKHCHGSWRTLPKRAGLNRCGKSCRLRWTNYLRPDIKRGQFTEEDERIIINLHSVLGNKWSKIAAHLPGRTDNEIKNYWNTHIRKKLLKMGIDPETHKPRTDLNHLMSLSQLLGMSNLSSVTSTTWGSNHLGLQPDITQLAKIQLLQNLLQLMNSSSFVNMGNPYLLGNLNPSFLNGTNPFQTKEPMVLSGSERFVNPSVYSQAHSECSQQQDVSKSLADAEGGSIPQDLDYNKISSTNHSRENQEENPLPALVSASPRMGTFNQIDSCGNLAQTSTESPSNTFFDDWEKLLDDERSDSYWKEILDFTSTSASPIMW* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g02209 347 MobiDBLite consensus disorder prediction 232 279 - -
Phac2g02209 347 SUPERFAMILY Homeodomain-like 12 109 IPR009057 -
Phac2g02209 347 Pfam Myb-like DNA-binding domain 15 62 IPR001005 -
Phac2g02209 347 Pfam Myb-like DNA-binding domain 68 112 IPR001005 -
Phac2g02209 347 CDD SANT 71 113 IPR001005 -
Phac2g02209 347 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 62 IPR017930 -
Phac2g02209 347 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Phac2g02209 347 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Phac2g02209 347 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 264 - -
Phac2g02209 347 MobiDBLite consensus disorder prediction 232 248 - -
Phac2g02209 347 FunFam MYB-related transcription factor 14 67 - -
Phac2g02209 347 MobiDBLite consensus disorder prediction 260 279 - -
Phac2g02209 347 Gene3D - 13 68 - -
Phac2g02209 347 Gene3D - 69 136 - -
Phac2g02209 347 FunFam Transcription factor MYB39 70 131 - -
Phac2g02209 347 SMART sant 14 64 IPR001005 -
Phac2g02209 347 SMART sant 67 115 IPR001005 -
Phac2g02209 347 CDD SANT 17 62 IPR001005 -
Phac2g02209 347 ProSiteProfiles Myb-like domain profile. 10 62 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g02209 Phac-Chr2 23747488 23749555 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g02209 1 336 MYB Transcription Factor Family AT5G16770 48.286 1.09e-94 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phac2g02209 Myb_DNA-binding 7.7e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g02209 K09422 - gmx:778082 567