Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g02208 ATGCACTACATAAGCCGATTTATAGCGGGGTTTATTATTGGGTTTGTTAGAGTGTGGCAGATAAGTCTAGTGACACTTTCAATTGTACCTTTGATTGCCCTTGCTGGAGGTCTTTATGCGTACGTCACAATTGGCCTTATTGCAAAAGTTCGAAAAGCCTATGTTCGAGCAGGGGAAATCGCTGAAGAGGTGATAGGTAATGTTAGAACGGTTCAAGCATTTGCCGGAGAAGAAAGAGCAGTAAGGTTATATAAAGCTGCTCTCATGAAAACTTATGTAAACGGTAGAAAAGCAGGTTTGGCAAAGGGCCTGGGCCTGGGCTCAATGCATTGTGTCCTTTTTCTATCGTGGGCTTTGCTTGTTTGGTTCACTAGTATTGTTGTTCACAAGAATATTGCAAATGGAGGCGAGTCTTTCACTACTATGCTCAATGTTGTGATCTCTGGCCTGTCACTTGGGCAGGCAGCACCAGATATCACTGCATTCATTCGAGCAAAGGCAGCAGCTTATCCAATCTTTGAGATGATAGAGAGGGACACAGTGAGCAAAAGTAGCTCAAAAACTGGTCGCAAGTTGGGCAAATTGGAGGGTCACATCCAGTTTAAGAATGTCTGTTTCAGTTACCCATCTCGTCCAGATGTAGCAATATTCAACAACCTGTGTCTTGACATTCCTTCAGGGAAAATTGTAGCCCTTGTGGGAGGAAGTGGTTCGGGAAAGAGCACTGTCATATCATTGATTGAACGCTTTTATGAACCACTTTCTGGTCAGATACTGTTAGACAGGAACGATATCAGGGAACTTGATCTCAAATGGCTTAGGCAGCAAATTGGGCTGGTTAACCAAGAACCCGCCCTTTTTGCTACAAGCATCAAGGAGAATATACTTTATGGAAAAGATGATGCCACTCTCGAAGAGCTAAAGCGTGCTGTGAAGCTTTCAGATGCTCAGTCTTTCATTGGCAATCTCCCTGATAGACTAGACACTCAGGTTGGTGAGAGAGGAATACAACTCTCAGGAGGGCAAAAGCAGAGGATTGCAATATCTCGTGCAATTGTGAAAAATCCATCAATCCTTTTGTTGGATGAAGCAACGAGTGCTCTGGATGCTGAGTCCGAGAAGAGTGTGCAGGAGGCTCTTGATCGTGTGATGGTTGGGAGAACAACTGTTGTAGTGGCACACAGACTTTCTACCATTAGGAATGCAGATGTGATTGCTGTTGTACAGGGAGGGAAGATTGTGGAAACTGGTAACCATCAAGAGCTCATGTCTAACCCAACTAGTGTATACGCATCTCTCGTTCAACTCCAGGAGGCAGCTTCTCTGCAACGCCTCCCATCAGTTGGTCCTAGCATGGGACGCCAACCAAGCATAACCTACTCAAGAGAGTTATCCCGTACAACCACCAGCCTTGGAGGTAGTTTTCGATCAGATAAAGACTCTATTGGCCGGGTTTGTGCTGAAGAAACAGAAAATTCTGGCAAGAAAAGATATGTTTCAGCAGCAAGACTGTATTCTATGGTTGGTCCCGACTGGTTTTATGGGGTTTTTGGGACCTTATGCGCATTTATTGCTGGAGCACAAATGCCACTTTTTGCACTTGGAATTTCTCATGCACTTGTATCATACTATATGGACTGGGACACAACATGTCGCGAAGTAAAAAAAATTGCTTTCCTCTTTTGTGGAGGAGCAGTTATAACTATCACTGTCCATGCTATTGAGCATCTTTCTTTTGGAATCATGGGAGAACGACTTACACTTCGTGTGAGAGAAAAGATGTTTTCAGCTATCTTGAAGAACGAAATTGGATGGTTTGATGATACAAACAACACAAGTTCTATGCTTTCATCGCAGTTAGAGACTGATGCAACATTGTTAAGAACTATAGTCGTTGATCGCTCAACAATTCTGTTACAGAATATTGGTTTGGTTGTTGCTTCATTTATTATTGCCTTCATCTTGAACTGGAGAATAACACTTATTATCATAGCTACATATCCTTTTGTCATTAGTGGTCATATCAGTGAGAAACTTTTTATGAAAGGATATGGTGGCAACTTGAGCAAAGCATATCTAAAAGCCAACATGCTCGCTGGGGAGGCTGTGAGCAATATACGCACTGTCGCTGCATTTTGTTCTGAAGAAAAGGTCCTTGACCTTTATGCTAATGAGCTTGTTGATCCCTCTAAACGCTCATTTAAACGAGGCCAAATTGCTGGCATATTCTATGGCGTTTCCCAGTTCTTTATTTTCTCATCTTATGGCCTTGCCTTGTGGTATGGATCTACTTTGATGGCAAAGGAGCTTGCTAGCTTTAAATCAATTATGAAGTCATTTATGGTTTTGATAGTAACAGCACTGGCTATGGGGGAGACTTTGGCCCTGGCCCCAGACCTTTTGAAAGGGAACCAAATGGTTGCATCAGTTTTTGAAGTGATGGATAGAAAGTCAGGAATAACAGGAGATGTAGGAGAAGAATTGAAAACAGTGGAGGGAACAATTGACCTCAAAAGAATCAATTTCAGCTACCCTTCAAGGCCAGATGTGATTATTTTCAAAGATTTCAGTCTAAGAGTTCCCGCAGGCAAGAGTGTTGCTCTAGTGGGGCAAAGTGGTTCTGGTAAAAGCTCTGTGATCTCCCTTATCCTCAGATTTTATGATCCAATATCCGGAAGGGTGTTAATTGATGGCAAAGACATCACGAAACTTAATCTGAAATCTCTTAGGAGACACATTGGTCTTGTGCAACAAGAGCCAGCTCTTTTTGCGACATCAATTTATGAAAACATACTTTATGGAAAAGAAGGTGCCTCTGATTCAGAAGTGATTGAAGCAGCTAAGCTTGCCAATGCTCATAACTTCATCAGTGGTCTTCCTGAGGGCTACTCCACCAAAGTAGGTGAACGAGGAGTGCAACTATCTGGTGGGCAGAGACAAAGGGTAGCCATTGCAAGAGCAGTTCTAAAGAACCCTGAAATCTTGCTTCTTGATGAAGCCACTAGTGCACTTGATGTGGAGTCAGAGCGTGTTGTGCAGCAAGCATTGGACAGATTAATGCAGAACAGAACAACAGTTATGGTGGCACATAGGCTCTCCACCATAAGAAATGCAGACCAAATCTCAGTTTTACAGGATGGAAAGATAATTGAGCAAGGGACTCATTCAAGTCTCATAGAGAATAAAAATGGACCATACTTTAAATTAGTCAACCTTCAACAACAACAGCATCATCAATTATAG 3243 0.4255 MHYISRFIAGFIIGFVRVWQISLVTLSIVPLIALAGGLYAYVTIGLIAKVRKAYVRAGEIAEEVIGNVRTVQAFAGEERAVRLYKAALMKTYVNGRKAGLAKGLGLGSMHCVLFLSWALLVWFTSIVVHKNIANGGESFTTMLNVVISGLSLGQAAPDITAFIRAKAAAYPIFEMIERDTVSKSSSKTGRKLGKLEGHIQFKNVCFSYPSRPDVAIFNNLCLDIPSGKIVALVGGSGSGKSTVISLIERFYEPLSGQILLDRNDIRELDLKWLRQQIGLVNQEPALFATSIKENILYGKDDATLEELKRAVKLSDAQSFIGNLPDRLDTQVGERGIQLSGGQKQRIAISRAIVKNPSILLLDEATSALDAESEKSVQEALDRVMVGRTTVVVAHRLSTIRNADVIAVVQGGKIVETGNHQELMSNPTSVYASLVQLQEAASLQRLPSVGPSMGRQPSITYSRELSRTTTSLGGSFRSDKDSIGRVCAEETENSGKKRYVSAARLYSMVGPDWFYGVFGTLCAFIAGAQMPLFALGISHALVSYYMDWDTTCREVKKIAFLFCGGAVITITVHAIEHLSFGIMGERLTLRVREKMFSAILKNEIGWFDDTNNTSSMLSSQLETDATLLRTIVVDRSTILLQNIGLVVASFIIAFILNWRITLIIIATYPFVISGHISEKLFMKGYGGNLSKAYLKANMLAGEAVSNIRTVAAFCSEEKVLDLYANELVDPSKRSFKRGQIAGIFYGVSQFFIFSSYGLALWYGSTLMAKELASFKSIMKSFMVLIVTALAMGETLALAPDLLKGNQMVASVFEVMDRKSGITGDVGEELKTVEGTIDLKRINFSYPSRPDVIIFKDFSLRVPAGKSVALVGQSGSGKSSVISLILRFYDPISGRVLIDGKDITKLNLKSLRRHIGLVQQEPALFATSIYENILYGKEGASDSEVIEAAKLANAHNFISGLPEGYSTKVGERGVQLSGGQRQRVAIARAVLKNPEILLLDEATSALDVESERVVQQALDRLMQNRTTVMVAHRLSTIRNADQISVLQDGKIIEQGTHSSLIENKNGPYFKLVNLQQQQHHQL* 1081
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g02208 1080 Pfam ABC transporter 218 366 IPR003439 GO:0005524
Phac2g02208 1080 FunFam ABC transporter B family member 4 189 444 - -
Phac2g02208 1080 Gene3D ABC transporter type 1, transmembrane domain 2 676 IPR036640 GO:0005524|GO:0016020
Phac2g02208 1080 CDD ABC_6TM_Pgp_ABCB1_D2_like 505 820 - -
Phac2g02208 1080 ProSitePatterns ABC transporters family signature. 338 352 IPR017871 GO:0005524|GO:0016887
Phac2g02208 1080 CDD ABC_MTABC3_MDL1_MDL2 199 437 - -
Phac2g02208 1080 SMART AAA_5 226 412 IPR003593 GO:0016887
Phac2g02208 1080 SMART AAA_5 862 1048 IPR003593 GO:0016887
Phac2g02208 1080 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 1 164 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac2g02208 1080 Pfam ABC transporter 854 1002 IPR003439 GO:0005524
Phac2g02208 1080 CDD ABC_MTABC3_MDL1_MDL2 835 1070 - -
Phac2g02208 1080 Gene3D ABC transporter type 1, transmembrane domain 690 1077 IPR036640 GO:0005524|GO:0016020
Phac2g02208 1080 FunFam ABC transporter B family member 2 636 832 - -
Phac2g02208 1080 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 192 437 IPR027417 -
Phac2g02208 1080 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 835 1071 IPR003439 GO:0005524
Phac2g02208 1080 SUPERFAMILY ABC transporter transmembrane region 4 177 IPR036640 GO:0005524|GO:0016020
Phac2g02208 1080 Pfam ABC transporter transmembrane region 2 147 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac2g02208 1080 Pfam ABC transporter transmembrane region 517 788 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac2g02208 1080 ProSitePatterns ABC transporters family signature. 974 988 IPR017871 GO:0005524|GO:0016887
Phac2g02208 1080 Gene3D - 825 1074 IPR027417 -
Phac2g02208 1080 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 516 802 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac2g02208 1080 FunFam ABC transporter B family member 4 825 1078 - -
Phac2g02208 1080 CDD ABC_6TM_Pgp_ABCB1_D1_like 2 172 - -
Phac2g02208 1080 PANTHER ABC TRANSPORTER B FAMILY 488 1072 IPR039421 -
Phac2g02208 1080 Gene3D - 197 463 IPR027417 -
Phac2g02208 1080 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 199 435 IPR003439 GO:0005524
Phac2g02208 1080 SUPERFAMILY ABC transporter transmembrane region 503 816 IPR036640 GO:0005524|GO:0016020
Phac2g02208 1080 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 829 1073 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g02208 Phac-Chr2 23719752 23726159 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g02208 1 1080 Calmodulin-binding Proteins AT2G36910 50.906 0.0 1076
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g02208 K05658 - gmx:100819045 1979.53