Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g02206 ATGTCAGACCGGGGTACCTTCTCCGGTGACTCGGCCGTGGATGCTAAGAGCAAAAAGGAACACAAAGTTTCTATACTGAAACTCTTTTCTTTTGCTGACTTCTATGACTGTGTCTTAATGGCCGTTGGATCTGTTGGGGCATGTATACATGGTGCTTCTGTACCCGTTTTCTTTATCTTCTTTGGCAAGTTGATCAATGTCATAGGCTTGGCCTATCTTTTCCCCAAGGAGGCCTCTCACAAAGTTGCCAAGTACTCTTTGGATTTTGTGTATCTAAGTATAGCAATATTGTTTTCATCTTGGGCAGAGGTGGCTTGTTGGATGCATACTGGGGAACGTCAAGCTGCAAAGATGAGAATGGCTTATTTGAAGTCAATGTTGAATCAAGATATAAGCCTATTTGACACTGAAGCATCAACGGGAGAGGTTATTTCTGCCATCACCAGTGACATTATCATTGTTCAAGATGCACTATCCGAGAAGGTGGGGAACTTCATGCACTACATAAGCCGATTTATAGCGGGGTTTATTATTGGGTTTGTTAGAGTGTGGCAGATAAGTCTAGTGACACTTTCAATTGTACCTTTGATTGCCCTTGCTGGAGGTCTTTATGCGTACGTCACAATTGGCCTTATTGCAAAAGTTCGAAAAGCCTATGTTCGAGCAGGGGAAATCGCTGAAGAGGTGATAGGTAATGTTAGAACGGTTCAAGCATTTGCCGGAGAAGAAAGAGCAGTAAGGTTATATAAAGCTGCTCTCATGAAAACTTATGTAAACGGTAGAAAAGCAGGTTTGGCAAAGGGCCTGGGCCTGGGCTCAATGCATTGTGTCCTTTTTCTATCGTGGGCTTTGCTTGTTTGGTTCACTAGTATTGTTGTTCACAAGAATATTGCAAATGGAGGCGAGTCTTTCACTACTATGCTCAATGTTGTGATCTCTGGCCTGTCACTTGGGCAGGCAGCACCAGATATCACTGCATTCATTCGAGCAAAGGCAGCAGCTTATCCAATCTTTGAGATGATAGAGAGGGACACAGTGAGCAAAAGTAGCTCAAAAACTGGTCGCAAGTTGGGCAAATTGGAGGGTCACATCCAGTTTAAGAATGTCTGTTTCAGTTACCCATCTCGTCCAGATGTAGCAATATTCAACAACCTGTGTCTTGACATTCCTTCAGGGAAAATTGTAGCCCTTGTGGGAGGAAGTGGTTCGGGAAAGAGCACTGTCATATCATTGATTGAACGCTTTTATGAACCACTTTCTGGTCAGATACTGTTAGACAGGAACGATATCAGGGAACTTGATCTCAAATGGCTTAGGCAGCAAATTGGGCTGGTTAACCAAGAACCCGCCCTTTTTGCTACAAGCATCAAGGAGAATATACTTTATGGAAAAGATGATGCCACTCTCGAAGAGCTAAAGCGTGCTGTGAAGCTTTCAGATGCTCAGTCTTTCATTGGCAATCTCCCTGATAGACTAGACACTCAGGTTGGTGAGAGAGGAATACAACTCTCAGGAGGGCAAAAGCAGAGGATTGCAATATCTCGTGCAATTGTGAAAAATCCATCAATCCTTTTGTTGGATGAAGCAACGAGTGCTCTGGATGCTGAGTCCGAGAAGAGTGTGCAGGAGGCTCTTGATCGTGTGATGGTTGGGAGAACAACTGTTGTAGTGGCACACAGACTTTCTACCATTAGGAATGCAGATGTGATTGCTGTTGTACAGGGAGGGAAGATTGTGGAAACTGGTAACCATCAAGAGCTCATGTCTAACCCAACTAGTGTATACGCATCTCTCGTTCAACTCCAGGAGGCAGCTTCTCTGCAACGCCTCCCATCAGTTGGTCCTAGCATGGGACGCCAACCAAGCATAACCTACTCAAGAGAGTTATCCCGTACAACCACCAGCCTTGGAGGTAGTTTTCGATCAGATAAAGACTCTATTGGCCGGGTTTGTGCTGAAGAAACAGAAAATTCTGGCAAGAAAAGATATGTTTCAGCAGCAAGACTGTATTCTATGGTTGGTCCCGACTGGTTTTATGGGGTTTTTGGGACCTTATGCGCATTTATTGCTGGAGCACAAATGCCACTTTTTGCACTTGGAATTTCTCATGCACTTGTATCATACTATATGGACTGGGACACAACATGTCGCGAAGTAAAAAAAATTGCTTTCCTCTTTTGTGGAGGAGCAGTTATAACTATCACTGTCCATGCTATTGAGCATCTTTCTTTTGGAATCATGGGAGAACGACTTACACTTCGTGTGAGAGAAAAGATGTTTTCAGCTATCTTGAAGAACGAAATTGGATGGTTTGATGATACAAACAACACAAGTTCTATGCTTTCATCGCAGTTAGAGACTGATGCAACATTGTTAAGAACTATAGTCGTTGATCGCTCAACAATTCTGTTACAGAATATTGGTTTGGTTGTTGCTTCATTTATTATTGCCTTCATCTTGAACTGGAGAATAACACTTATTATCATAGCTACATATCCTTTTGTCATTAGTGGTCATATCAGTGAGAAACTTTTTATGAAAGGATATGGTGGCAACTTGAGCAAAGCATATCTAAAAGCCAACATGCTCGCTGGGGAGGCTGTGAGCAATATACGCACTGTCGCTGCATTTTGTTCTGAAGAAAAGGTCCTTGACCTTTATGCTAATGAGCTTGTTGATCCCTCTAAACGCTCATTTAAACGAGGCCAAATTGCTGGCATATTCTATGGCGTTTCCCAGTTCTTTATTTTCTCATCTTATGGCCTTGCCTTGTGGTAG 2778 0.4298 MSDRGTFSGDSAVDAKSKKEHKVSILKLFSFADFYDCVLMAVGSVGACIHGASVPVFFIFFGKLINVIGLAYLFPKEASHKVAKYSLDFVYLSIAILFSSWAEVACWMHTGERQAAKMRMAYLKSMLNQDISLFDTEASTGEVISAITSDIIIVQDALSEKVGNFMHYISRFIAGFIIGFVRVWQISLVTLSIVPLIALAGGLYAYVTIGLIAKVRKAYVRAGEIAEEVIGNVRTVQAFAGEERAVRLYKAALMKTYVNGRKAGLAKGLGLGSMHCVLFLSWALLVWFTSIVVHKNIANGGESFTTMLNVVISGLSLGQAAPDITAFIRAKAAAYPIFEMIERDTVSKSSSKTGRKLGKLEGHIQFKNVCFSYPSRPDVAIFNNLCLDIPSGKIVALVGGSGSGKSTVISLIERFYEPLSGQILLDRNDIRELDLKWLRQQIGLVNQEPALFATSIKENILYGKDDATLEELKRAVKLSDAQSFIGNLPDRLDTQVGERGIQLSGGQKQRIAISRAIVKNPSILLLDEATSALDAESEKSVQEALDRVMVGRTTVVVAHRLSTIRNADVIAVVQGGKIVETGNHQELMSNPTSVYASLVQLQEAASLQRLPSVGPSMGRQPSITYSRELSRTTTSLGGSFRSDKDSIGRVCAEETENSGKKRYVSAARLYSMVGPDWFYGVFGTLCAFIAGAQMPLFALGISHALVSYYMDWDTTCREVKKIAFLFCGGAVITITVHAIEHLSFGIMGERLTLRVREKMFSAILKNEIGWFDDTNNTSSMLSSQLETDATLLRTIVVDRSTILLQNIGLVVASFIIAFILNWRITLIIIATYPFVISGHISEKLFMKGYGGNLSKAYLKANMLAGEAVSNIRTVAAFCSEEKVLDLYANELVDPSKRSFKRGQIAGIFYGVSQFFIFSSYGLALW* 926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g02206 925 Gene3D ABC transporter type 1, transmembrane domain 27 606 IPR036640 GO:0005524|GO:0016020
Phac2g02206 925 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 41 329 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac2g02206 925 Pfam ABC transporter 383 531 IPR003439 GO:0005524
Phac2g02206 925 SMART AAA_5 391 577 IPR003593 GO:0016887
Phac2g02206 925 CDD ABC_6TM_Pgp_ABCB1_D1_like 40 337 - -
Phac2g02206 925 FunFam ABC transporter B family member 4 354 609 - -
Phac2g02206 925 Gene3D ABC transporter type 1, transmembrane domain 645 925 IPR036640 GO:0005524|GO:0016020
Phac2g02206 925 PANTHER ABC TRANSPORTER B FAMILY 12 605 IPR039421 -
Phac2g02206 925 Pfam ABC transporter transmembrane region 682 925 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac2g02206 925 Pfam ABC transporter transmembrane region 45 312 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac2g02206 925 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 364 600 IPR003439 GO:0005524
Phac2g02206 925 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 681 925 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac2g02206 925 ProSitePatterns ABC transporters family signature. 503 517 IPR017871 GO:0005524|GO:0016887
Phac2g02206 925 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 357 602 IPR027417 -
Phac2g02206 925 SUPERFAMILY ABC transporter transmembrane region 668 925 IPR036640 GO:0005524|GO:0016020
Phac2g02206 925 Gene3D - 354 603 IPR027417 -
Phac2g02206 925 FunFam ABC transporter B family member 1 27 363 - -
Phac2g02206 925 SUPERFAMILY ABC transporter transmembrane region 27 334 IPR036640 GO:0005524|GO:0016020
Phac2g02206 925 CDD ABC_6TM_Pgp_ABCB1_D2_like 670 925 - -
Phac2g02206 925 CDD ABC_MTABC3_MDL1_MDL2 364 602 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g02206 Phac-Chr2 23717948 23726159 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g02206 14 925 Calmodulin-binding Proteins AT2G36910 47.854 0.0 840
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g02206 K05658 - gmx:100819045 1715.28