Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g02194 ATGAGCTTTCAGGACATCGAGGCTGGCCGGCCTTTCGATTCCCGGCGCAACCTGATCAACGGCAAACAAGACCCTACGCATGCGGTGGCTTCCGGCGTGTTTCAGATCAACACCGCCGTCTCCACGTTCCAGCGACTCGTCAACACCCTCGGAACCCCCAAGGACACGCCCGAACTCCGCGAGAAGCTGCATAAGACAAGACTGCATATTGGACAATTGGTGAAGGATACTTCGAATAAACTTAAGCAAGCTAGTGAGATTGATCACAATGCTGAAGTTAATGCGAATAAGAAGATAGCAGATGCTAAGCTTGCAAAAGATTTTCAGGCGGTGTTGAAAGAGTTTCAGAAGACTCAGCGTCTTGCAGCTGAGAGGGAAACAGCTTATACATCTTTTGTTCCACAAGCAGTTCTTCCATCCAGCTATACAGCTGGCGAAATAGCCATTAGTTCTGATAAGACTCCAGAAGAGCGGGCCCTTCTTGTGGAATCTAGAAGACAGGAGGTATTATTCTTAGATAATGAGATTGCATTTAATGAGGCTATCATTGAGGAAAGAGATCAAGGAATTCAAGAAATCCAGCAGCAAATTGGTGAAGTGAATGAGATTTTCAAAGATCTTGCTGTGCTTGTCCATGAGCAAGGAACAATGATTGATGATATTGGGTCCAATATTGAGCATTCTCATGAAGCAACTGTACAAGCAAAATCTCAACTTGCCAAAGCATCAAAGACGCAAAGATCAAATTCATCTTTGACGTGCTTGCTTTTGGTGATATTTGGGATCGTGCTTCTAATCGTCATCATTGTCCTTGCTGCTTAG 822 0.4477 MSFQDIEAGRPFDSRRNLINGKQDPTHAVASGVFQINTAVSTFQRLVNTLGTPKDTPELREKLHKTRLHIGQLVKDTSNKLKQASEIDHNAEVNANKKIADAKLAKDFQAVLKEFQKTQRLAAERETAYTSFVPQAVLPSSYTAGEIAISSDKTPEERALLVESRRQEVLFLDNEIAFNEAIIEERDQGIQEIQQQIGEVNEIFKDLAVLVHEQGTMIDDIGSNIEHSHEATVQAKSQLAKASKTQRSNSSLTCLLLVIFGIVLLIVIIVLAA* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g02194 273 PANTHER SYNTAXIN 27 265 IPR045242 -
Phac2g02194 273 Pfam SNARE domain 216 268 IPR000727 -
Phac2g02194 273 FunFam Syntaxin-22 like 173 273 - -
Phac2g02194 273 ProSitePatterns Syntaxin / epimorphin family signature. 186 225 IPR006012 GO:0005484|GO:0006886|GO:0016020
Phac2g02194 273 Gene3D - 20 133 - -
Phac2g02194 273 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 180 242 IPR000727 -
Phac2g02194 273 Pfam Syntaxin-like protein 30 129 IPR006011 GO:0016020
Phac2g02194 273 Gene3D - 174 273 - -
Phac2g02194 273 SMART tSNARE_6 175 242 IPR000727 -
Phac2g02194 273 CDD SynN 28 147 IPR006011 GO:0016020
Phac2g02194 273 SUPERFAMILY t-snare proteins 23 235 IPR010989 GO:0016020|GO:0016192
Phac2g02194 273 FunFam Syntaxin-22 like 20 133 - -
Phac2g02194 273 SMART SynN_4 13 127 IPR006011 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g02194 Phac-Chr2 23613760 23617326 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g02194 1 261 SNARE and Associated Proteins AT5G46860 75.862 1.56e-143 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g02194 - - gmx:100810149 420.624