Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g02173 ATGAAACGCAAATTCAAGGCTTTAACTTGTTGTTCATTGTTTGTTGCATGTGTAAAATGTAACTTTGGTGGCAGTTTGTTCAAGGAATGTCCTCACCCAGATGATAAGCAGAGGCTGAAACTGAGCCATGAATTGGGCCTGAAACCGCGCCAGGTCAAGTTCTGGTTCCAGAACCGTCGAACCCAGATGAAGGCACAACAAGATCGGGCAGATAATATCATACTTAGAGCCGAGAATGAGACTCTAAAGAGTGAGAACTATCGGTTACAAGCTGCACTGCGCAACGTTATGTGTCCCAATTGTGGTGGCCAATGCATAATGGGTGCTGATCTGGGTTTGGATGAACACCAAGTTCGCATTGAAAATGCCCGCTTAAGAGAAGAGTTAGAACGCGTGTGTTGCCTGACTTCAAGGTATACTGGGCGTTCATTACAAACAATGGCAGCAGGTCCTACTCTCATGACCCCTTCATTGGATTTGGATATGAACATGTATCCTAGGCACTTTTCGGATCCTGTTGCTCCTTGCACAGAAATGATTCCTGTGCCAATGCTGCCTCCCGAAGCTTCACCATTTTCTGAGGGTGGAGGAGTCTTAATGGAGGAAGAAAAGTCTCTAGCCTTGGAGCTTGCGGCTTCTTCCATGGCGGAACTTGTGAAGATGTGTCAGACAAACGAGCCACTTTGGATCCGAAGCAGTGAGGGTGAAAGGGAAGTGTTAAATTTTGAAGAGCACGCAAGGATATTTCCTTGGCCTCAGAATCTCAAGCACCGAAGTGAACTGAGGACTGAAGCTAGCCGTGACACTTCTGTGGTTATAATGAATAGCGTCACTCTTGTTGATGCTTTCCTTGATGGTCAAAAATGGATGGAATTGTTTCCTACAATCGTGTCTCGAGCAAAAACTGTCCAAATCATATCTTCTGGTGCTTCTGGTCATGCAAGCGGGACTCTTCAGCTGATGTACGCAGAATTTCAAGTTCTTTCTCCTTTGGTGTCCACTCGTGAGACTCATTTTCTTCGTTATTGTCAACAAAATGCTGAGGAAGGAACCTGGGCCATTGTTGATTTTCCTCTTGACAGCTTTCACCAAAATTTTCACCCTTCTTATCCCAGATACTGCAGGAGATCCTCTGGTTGCGTCATTCAAGATATGCCAAATGGGTATTCAAGGGTAACATGGGTTGAGCACGCAAAAATAGAAGAGAAACCTGTGCATCAGATATTCAGCAACTATGTGTATAGTGGAATGGCATTCGGAGCACAGCGTTGGTTAGGAGTTTTGCAGAGACAGTGCGAGAGGGTCGCGAGCCTCATGGCCAGAAACATATCAGATCTTGGAGTGATACCTTCGCCAGAAGCACGAAAGAACTTGATGAAACTGGCCCAAAGAATGATAAAAACTTTTGGCCTTAACATGAGTACCTCTGGTGGTCAATCGTGGACAGCCATATCAGATTCCCCTGAAGACACAGTCAGAATCACAACTAGGAAAGTCACGGAGCCTGGCCAACCTAATGGTGTGATTCTGAGTGCTGTTTCAACCACTTGGTTGCCCTATTCTCATACCAAGGTCTTTGATCTCCTTAGGGACGAACGACACAGATCTCAGATGGATGCTCTTTCAAACGGGAACTCATTGAATGAAGTGGCTCATATTGCAAATGGCTCACATCCAGGAAACTGCATTTCACTTCTTCGCATAAATGTAGCAAGCAACTCATCCCAGAACGTAGAGCTGATGCTGCAAGAGAGTTGCACCGACCAGTCTGGAAGCTTGGTAGTATACACCACCATTGATGTGGATTCCATCCAGCTAGCCATGAGTGGCGAGGACCCTTCTTGCATTGCCCTTCTCCCCCAAGGCTTCACGATAGTGCCAATGCTATCATCACCCAACGTTGACACACCCATCAATGCAAACTCCTCAGAGCCTCCATCTCTCAACTCGGGTTGCCTCCTAACCATGGGGCTGCAAGTTCTCGCCAGCACAATCCCTTCTGCAAAGCTCAATCTCTCAAGTGTCACGGCCATCAACAACCACCTCTGCAACACATTGCACCAAATTGAAGCTGCTCTTTCAAATAGCAACGAGAATGGCACCAATTTCCTTTGCACTGAACCCACCGCCAGTGCACCTCCCAAGCAGTGA 2151 0.4668 MKRKFKALTCCSLFVACVKCNFGGSLFKECPHPDDKQRLKLSHELGLKPRQVKFWFQNRRTQMKAQQDRADNIILRAENETLKSENYRLQAALRNVMCPNCGGQCIMGADLGLDEHQVRIENARLREELERVCCLTSRYTGRSLQTMAAGPTLMTPSLDLDMNMYPRHFSDPVAPCTEMIPVPMLPPEASPFSEGGGVLMEEEKSLALELAASSMAELVKMCQTNEPLWIRSSEGEREVLNFEEHARIFPWPQNLKHRSELRTEASRDTSVVIMNSVTLVDAFLDGQKWMELFPTIVSRAKTVQIISSGASGHASGTLQLMYAEFQVLSPLVSTRETHFLRYCQQNAEEGTWAIVDFPLDSFHQNFHPSYPRYCRRSSGCVIQDMPNGYSRVTWVEHAKIEEKPVHQIFSNYVYSGMAFGAQRWLGVLQRQCERVASLMARNISDLGVIPSPEARKNLMKLAQRMIKTFGLNMSTSGGQSWTAISDSPEDTVRITTRKVTEPGQPNGVILSAVSTTWLPYSHTKVFDLLRDERHRSQMDALSNGNSLNEVAHIANGSHPGNCISLLRINVASNSSQNVELMLQESCTDQSGSLVVYTTIDVDSIQLAMSGEDPSCIALLPQGFTIVPMLSSPNVDTPINANSSEPPSLNSGCLLTMGLQVLASTIPSAKLNLSSVTAINNHLCNTLHQIEAALSNSNENGTNFLCTEPTASAPPKQ* 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g02173 716 SMART START_1 209 434 IPR002913 GO:0008289
Phac2g02173 716 SUPERFAMILY Homeodomain-like 26 67 IPR009057 -
Phac2g02173 716 SMART HOX_1 19 70 IPR001356 GO:0003677
Phac2g02173 716 ProSiteProfiles START domain profile. 200 437 IPR002913 GO:0008289
Phac2g02173 716 Gene3D - 215 422 IPR023393 -
Phac2g02173 716 ProSiteProfiles 'Homeobox' domain profile. 27 66 IPR001356 GO:0003677
Phac2g02173 716 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 25 693 IPR042160 -
Phac2g02173 716 Pfam Homeodomain 26 64 IPR001356 GO:0003677
Phac2g02173 716 CDD START_ArGLABRA2_like 204 433 - -
Phac2g02173 716 SUPERFAMILY Bet v1-like 201 436 - -
Phac2g02173 716 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 17 - -
Phac2g02173 716 FunFam Homeobox-leucine zipper protein HDG1 23 82 - -
Phac2g02173 716 Pfam START domain 210 434 IPR002913 GO:0008289
Phac2g02173 716 CDD homeodomain 27 67 IPR001356 GO:0003677
Phac2g02173 716 SUPERFAMILY Bet v1-like 452 690 - -
Phac2g02173 716 ProSitePatterns 'Homeobox' domain signature. 41 64 IPR017970 GO:0000981|GO:0006355
Phac2g02173 716 Gene3D - 24 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g02173 Phac-Chr2 23463359 23468244 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g02173 25 696 Homeobox Transcription Factor Family AT5G46880 60.801 0.0 821
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Phac2g02173 START 5.4e-40 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g02173 - - gmx:100793658 1260.74