LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phac2g02119	ATGGCAGATAGTTCAGTATCGTTTTTACTGGAAAAGCTGGATTCTTTACTTCAGGAAGAAGTGAATCTGCAGAGAGGGGTTCGTGAAGATGTTCAGCACATCAAATATGAACTTGAACGTCACAAGGCCATCTTAAGGATGGCTGATGCTATGGAGGACAAAGACCCTGAACTCAAAGCATGGGTCAAACGAGTGAGAGATGTTGCTCATGACATGGAAGATGCTATAGATGAATTCAACCTTCGCCTTGTTGATCAACATGGACAAGGCAACAATTCTTCTCTTCATAGGTTTATTTTCGGCCTTAAGACCATGAAAGCTCGGCGAAGAATTGCTTTAGATATGCAAAGTATCAAATGCAAAGTGAACGTTATATCCCAGGGACGTCCTGAGTTACCTGGGATAGGGTCGAGGTCAAGTCAACGGCTTTCATCAAGGCTTGATAGCCAAGGAGATGCACTTCTGCTAGAAGAAGCTGATCTGGTGGGTATTGACAAACCCAAAAGGCAGATTTGTGATTTGCTTTTCAATGAAGACCCGGGTAGGGCTGTGATTCCAATTTATGGAATGGGAGGGTTGGGGAAAACCACCCTGGCAAAGCAGGTCTATGATGATCCAAAAGTGAAGAAACGTTTCAGGATTCATGCTTGGATTAATGTTTCACAGTCTTTTAAGCTACAAGAGCTCCTTAAAGACCTGGTTCATCAGCTCCATAATGTCATTGGCAAACCAGCTCCGGAAGCAGTTGGGCAAATGAAAAGTGAGGGGCTCAAAGAGATGATCAAGAACTTGCTTCAGAGCAGCAGGTACCTAATTGTGCTGGATGATGTGTGGCATGTGAGGGTATGGGACTCTGTCAAACTTGCTTTGCCTAATAGCAACCGTGGAAGTAGAGTGATGGTCACAACACGCAAAAAAGATATAGCTTTGTATTCTTGTGCTGAACTGGGTAAGGATTTTAACCTTGATTTCTTACCTGAGGAAGAAGCTTGGTATCTTTTCTGCAAGAAAACATTTCAGGGTAACTCATGTCCTCCTCATCTGGAGGAGGTTTGCAGGAAGATCTTAAAAATGTGTGGTGGGTTGCCACTAGCAATTGTGGCAATTGGTGGTGCTTTGGCTACCAAAGGGAGGGCAAACATTGAAGAGTGGCAGATGGTTTGCAGAAGTTTTGGGTCTGAAATTGAAGGCAATGACAAACTGGGGGATATGAATAAAGTGCTTTCCCTAAGTTTCAATGAGTTGCCTTACTATCTTAAATCATGCTTGTTGTACCTAAGCATCTTCCCTGAGTTTCATGCAATTGAGCACATGAGACTAATTCGCTTGTGGATTGCTGAAGGTTTTGTGAATGGAGAAGATGGAAAGACAAGGGAGGAAGTTGCAGACAGTTACCTCAAGGAGCTCTTGGACAGAAGTCTGCTGCAAGTTGTAGCAAAAACCAGTGATGGCAGGATGAAGACTTGTCGTATGCATGATCTTCTAAGGGAGATTGTGAATTTGAAGGCAAAGGATCAAAACTTTGCAACAATAGCCAAAGATCAAGACATAATCTGGCCAGACAAAGTTCGACGCCTGTCAATCATAAATACATTGCATAATGTGCAAAAAAATAGAGCTTCATTCCAACTCCGGTCTCTGCTACTGTTTGACTTATCAGATTCACTGGATCATTTTTCTATACGTGCATTATGTTCCACTGGTTACAAGTTAATCAGGGTCTTAGATTTGCAGGATACACCTTTGGAGGTTTTTCCTGCCGAAATTTTCAGCCTTTACCTTCTCAAGTATCTGAGTTTGAAGAATACAAAGGTGAAAAGCATTCCAGGTACCATTAAGAAGCTGCAGCAGCTGGAGACTCTAGATCTTAAACAAACCCTTGTCACTGTATTGCCAGTTGAAATTGTGGAGCTGCAACAATTACGCCATCTCTTGGTGTATCGCTATGAGATTGAATCTTATGCTTATTTCCATTCAAGGCACGGCTTCAAGGTGGCTGCCCCTATAGGACTCATGAAATCTTTGCAAAAGCTATGCTTTATAGAGGCAGACCAGGCTTTGATGGTTGAGCTAGGAAAACTCACTCAACTCAGGAGGCTTGGCATTAGAAAGATGAGGCAACAAGATGGTGCTGCTCTGTGTTCATCCATTGAGAAGATGAACAATCTCCGCTCACTGTCCATCACAGCAATTGAAGATTATGAGATCATTGATATTCACAACATCTTCAGGCCTCCTCCCTATCTCCAGCAGTTATACTTGAGTGGACGTTTAGACACTTTTCCCCACTGGATTAGTTCTCTTAAGAATTTGGTGCGAGTGTTTCTAAAATGGAGCCGGCTAAGAGAGGATCCTCTGGTACATCTTCAAGATTTGCCAAATCTGAGACATCTGGAGTTTCTTCAAGTTTATGTAGGCGAGACATTGAATTTCAAGGCAAAAGGGTTTCCAAGTCTGAAGGTGTTAGGCCTTGATGATTTAGATGAACTGAAATGTATGACTGTGGAGGAGGGAGCAATGCCTGGTCTTAAAAAGCTCATAATCCAGCGCTGTGGTTCACTGAAGCAGGTACCCTTAGGCATTGAACATCTAGCAAAACTAAAATCAATTGAGTTTTTTGACATGCCTGAAGAATTGATCACAAGACTTTCAAGTGGAGGTGAGGATTATTTGAGAGCACAACATGTGCCAGCAGTTTATTCCTCATATTGGAGGGATGGAGGTTGGGATGTCTACTCATTAGAGACTTTAGGGGAGCGAGAGACTGATTTCAGTCGCAGTACTGCGATGAGAAGTCTTGAAAATTGTACTCTCTGGAAGGTTTAA	2826	0.4268	MADSSVSFLLEKLDSLLQEEVNLQRGVREDVQHIKYELERHKAILRMADAMEDKDPELKAWVKRVRDVAHDMEDAIDEFNLRLVDQHGQGNNSSLHRFIFGLKTMKARRRIALDMQSIKCKVNVISQGRPELPGIGSRSSQRLSSRLDSQGDALLLEEADLVGIDKPKRQICDLLFNEDPGRAVIPIYGMGGLGKTTLAKQVYDDPKVKKRFRIHAWINVSQSFKLQELLKDLVHQLHNVIGKPAPEAVGQMKSEGLKEMIKNLLQSSRYLIVLDDVWHVRVWDSVKLALPNSNRGSRVMVTTRKKDIALYSCAELGKDFNLDFLPEEEAWYLFCKKTFQGNSCPPHLEEVCRKILKMCGGLPLAIVAIGGALATKGRANIEEWQMVCRSFGSEIEGNDKLGDMNKVLSLSFNELPYYLKSCLLYLSIFPEFHAIEHMRLIRLWIAEGFVNGEDGKTREEVADSYLKELLDRSLLQVVAKTSDGRMKTCRMHDLLREIVNLKAKDQNFATIAKDQDIIWPDKVRRLSIINTLHNVQKNRASFQLRSLLLFDLSDSLDHFSIRALCSTGYKLIRVLDLQDTPLEVFPAEIFSLYLLKYLSLKNTKVKSIPGTIKKLQQLETLDLKQTLVTVLPVEIVELQQLRHLLVYRYEIESYAYFHSRHGFKVAAPIGLMKSLQKLCFIEADQALMVELGKLTQLRRLGIRKMRQQDGAALCSSIEKMNNLRSLSITAIEDYEIIDIHNIFRPPPYLQQLYLSGRLDTFPHWISSLKNLVRVFLKWSRLREDPLVHLQDLPNLRHLEFLQVYVGETLNFKAKGFPSLKVLGLDDLDELKCMTVEEGAMPGLKKLIIQRCGSLKQVPLGIEHLAKLKSIEFFDMPEELITRLSSGGEDYLRAQHVPAVYSSYWRDGGWDVYSLETLGERETDFSRSTAMRSLENCTLWKV*	942

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phac2g02119	941	CDD	RX-CC_like	2	126	IPR038005	-
	Phac2g02119	941	Gene3D	Ribonuclease Inhibitor	680	883	IPR032675	-
	Phac2g02119	941	Gene3D	Ribonuclease Inhibitor	553	679	IPR032675	-
	Phac2g02119	941	Gene3D	-	5	112	-	-
	Phac2g02119	941	Gene3D	-	324	411	IPR042197	-
	Phac2g02119	941	FunFam	Probable disease resistance protein At1g61300	151	316	-	-
	Phac2g02119	941	Gene3D	-	412	502	IPR036388	-
	Phac2g02119	941	PRINTS	Disease resistance protein signature	184	199	-	-
	Phac2g02119	941	PRINTS	Disease resistance protein signature	613	629	-	-
	Phac2g02119	941	PRINTS	Disease resistance protein signature	359	373	-	-
	Phac2g02119	941	PRINTS	Disease resistance protein signature	264	278	-	-
	Phac2g02119	941	SUPERFAMILY	L domain-like	490	876	-	-
	Phac2g02119	941	Pfam	Leucine rich repeat	573	626	IPR001611	GO:0005515
	Phac2g02119	941	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	156	426	IPR027417	-
	Phac2g02119	941	Gene3D	-	150	314	IPR027417	-
	Phac2g02119	941	Pfam	NB-ARC domain	166	413	IPR002182	GO:0043531
	Phac2g02119	941	Pfam	Rx N-terminal domain	6	93	IPR041118	-
	Phac2g02119	941	PANTHER	DISEASE RESISTANCE PROTEIN RP	45	852	IPR044974	GO:0006952
	Phac2g02119	941	FunFam	Probable disease resistance protein At1g63360	412	500	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Phac2g02119	Phac-Chr2	23033862	23036996	Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Phac2g02119	185	378	WRKY Transcription Factor Family	AT5G45050	29.381	3.93e-09	58.9

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Phac2g02119	K13457		-	gmx:100305458	1610.89