Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g02052 ATGGAGTCCACTGAGCATGGGAGCGTGTCAGTTAGAGAGTTCCATGCGAATGGAAGCCGCATGGTTGCATCAGAAGTTGAGGCCAAGCTTGACCAAGGAAATATTCAAGAAGCAGAAGATTCGTTGAAAGAAGGATTGTCACTCAATTTTGAGGAAGCAAGAGCTCTTCTTGGTAAGTTGGAGTATCAGAGAGGTAATGTAGAAGGTGCTCTTCGTGTGTTTGATGGGATTGATCTCCAAGCTGCCATACAACGGTTGCAATCTTCCTTTTCTGAAAAAACACCAGTCAAGAAAGGTCGTGCTCCCACTGAATCAGTCTCAGTCTCTCAGCATGCTGCTAGTTTGGTGCTTGAAGCCATCTACTTAAAAGCCAAGTCTCTGCAAAAACTGGGGAAATTTGCTGAGGCTGCTAATAATTGTAAACATATTCTTGATGCCGTTGAGAAGATATTTTATCTGGGTATTACTGATATTCAAGTGGATAATAAATTGCAAGAGATAGTCAGCCACGCAGTAGAGCTCCTTCCGGAGCTTTGGAAACAAGCTGGTTGCTATGATGAGGCAATCTCTGCTTATAGGCGAGCCCTTCTTAGTAAATGGAACCTTGATAATGATTACTGTGCAAGAATTCAGAAGTCATTTGTTATTTTTTTGCTATACAGTGGGGTGGAGGCAAGTCCACCTAGTTTAGCAGTTCAGATTGAGGGATCATATGTGCCTAAAAATAATCTTGAAGAGGCTATTCTGTTATTGATGATTCTTTTAAGAAAGTTTAGCCTTGGGAAGATGAAATGGGATCCTTCAGTCATGGAACACCTTTCTTTTGCACTTTCTATATGTAGCCAAACCTCTATTTTAGCAAAGCAACTTGAAGAATTGATGCCTGGAGTATACCATCGAATTGATTGTTGGAAATCTTTAGCTTTATGCTACAGTGGAGCTGGACAAAACGAATGTGCTTTGAGCCTGCTAAGGAAATCTTTGCATAAACATGAACGACCAAATGACCTTACATCATTATTGTTAGCAGCTCGCATCTGCTGTGAGGATCCCCATCTTGCTGCTGAGGGAGTGAACTATGCACAGAGGGCAGTCAATAATGCTCATGACCAAAATGAGCATTTGAAAGGTGTTGCTCTTCGGATGTTGGGACTTTGTCTGGGAAAGCAAGCTAAGGTTTCTTCCTCTGACTCTGAGAGATCTCGCCTTCAGTCCAAAGCTTTGGAGTCATTGGTGGCGGCAATCAAATTGGAGCCAAACAATTGTGATCTGATTTTTGAATTGGCTGTTCATTATGCACAACACCGAAATTTGTCTGCTGCTTTGCGCTCTGCAAGGCATTTCTTTAATCAAACAGGTGGTTCAGTGTTGAAAGCTTGGAGATTGCTTGCTCTAATTTTGTCTGCACAGCAAAGATTTTCAGAAGCTGAAGTGGTGATAGATGCTGCTTTAGATCAGACTGCAAGATGGGAGCAGGGGCCACTGCTTAGGCTGAAAGCAAAGCTGAAGATCTCCCAATCACGACCCATGGATGCTATTGAAACCTATAGATACCTTCTTGCATTGGTTCAAGCCCAGAAGAAATCCTTTGGGTCTTTCCAAATTAGTTCAAAGGTTTTGGATGATAAAATAAATGAATTTGAAATTTGGCATGGTCTGGCAAATTTATATGCTAGTCTTTCTCATTGGAAGGATGCTGAAATCTGTCTGCAGAAGGGGAGGGAGTTGAAGAAATACTCTGCAGCATTAATGCACACTCAAGGGGTTTTGTTTGAAGGACGTGGGCAATATGAAGATGCTCTTCTTGCTACTATTAATGGTGTACTAATTGAACCAAACCATGTTCCATGCAAGATCTTGATGGGTTCTATGATTCAAAAAATAGGCCCAAAGTATTTGGCTGCTGCAAGAAGCTCAATGTCTGATGCAATCCGAATAGAACCCACTAACCGCATGGCTTGGCATTACTTGGGATTGCTTAACAAGAAAGATGGCCGAATAAGTGATGCCGCTGACTGCTTCCAAGCAGCTTCAATGCTTGAAGAATCTGATCCCATCGAAAGTTTCAGCTCTATACTTTGA 2082 0.4203 MESTEHGSVSVREFHANGSRMVASEVEAKLDQGNIQEAEDSLKEGLSLNFEEARALLGKLEYQRGNVEGALRVFDGIDLQAAIQRLQSSFSEKTPVKKGRAPTESVSVSQHAASLVLEAIYLKAKSLQKLGKFAEAANNCKHILDAVEKIFYLGITDIQVDNKLQEIVSHAVELLPELWKQAGCYDEAISAYRRALLSKWNLDNDYCARIQKSFVIFLLYSGVEASPPSLAVQIEGSYVPKNNLEEAILLLMILLRKFSLGKMKWDPSVMEHLSFALSICSQTSILAKQLEELMPGVYHRIDCWKSLALCYSGAGQNECALSLLRKSLHKHERPNDLTSLLLAARICCEDPHLAAEGVNYAQRAVNNAHDQNEHLKGVALRMLGLCLGKQAKVSSSDSERSRLQSKALESLVAAIKLEPNNCDLIFELAVHYAQHRNLSAALRSARHFFNQTGGSVLKAWRLLALILSAQQRFSEAEVVIDAALDQTARWEQGPLLRLKAKLKISQSRPMDAIETYRYLLALVQAQKKSFGSFQISSKVLDDKINEFEIWHGLANLYASLSHWKDAEICLQKGRELKKYSAALMHTQGVLFEGRGQYEDALLATINGVLIEPNHVPCKILMGSMIQKIGPKYLAAARSSMSDAIRIEPTNRMAWHYLGLLNKKDGRISDAADCFQAASMLEESDPIESFSSIL* 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g02052 693 Gene3D Tetratricopeptide repeat domain 242 451 IPR011990 GO:0005515
Phac2g02052 693 PANTHER PROTEIN NPG1 5 690 IPR043376 -
Phac2g02052 693 SUPERFAMILY TPR-like 30 201 IPR011990 GO:0005515
Phac2g02052 693 Gene3D Tetratricopeptide repeat domain 21 201 IPR011990 GO:0005515
Phac2g02052 693 SUPERFAMILY TPR-like 117 442 IPR011990 GO:0005515
Phac2g02052 693 Gene3D Tetratricopeptide repeat domain 452 615 IPR011990 GO:0005515
Phac2g02052 693 Gene3D Tetratricopeptide repeat domain 628 687 IPR011990 GO:0005515
Phac2g02052 693 SUPERFAMILY TPR-like 403 677 IPR011990 GO:0005515
Phac2g02052 693 SMART tpr_5 301 334 IPR019734 GO:0005515
Phac2g02052 693 SMART tpr_5 581 614 IPR019734 GO:0005515
Phac2g02052 693 SMART tpr_5 117 150 IPR019734 GO:0005515
Phac2g02052 693 SMART tpr_5 651 684 IPR019734 GO:0005515
Phac2g02052 693 SMART tpr_5 547 580 IPR019734 GO:0005515
Phac2g02052 693 SMART tpr_5 457 490 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g02052 Phac-Chr2 22443411 22450222 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g02052 11 693 Calmodulin-binding Proteins AT2G43040 70.160 0.0 962
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g02052 K21843 - gmx:100814609 1171.76