Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g02037 ATGAAGATTCTAAAGTTGATAATATATCCTTATCTGTTCACATATGCTAGCTTTGTTCTTTCAGAGGAGCAGGAAGAGAGTGTGGTAGATGCATCTAAAGAAGAGAGTGCTCTTGAACGTGAATTACATGTTGACTCACTGCAGACTGAAGAATTGGATGCTGATGTACAAAAACTTGAGGAGGAAGGGCCTGAAGTTCAGAAAAGGTCTACGGCTGTGCCATTGCCTGTTTTATGTGTGGAAGATGGTGTGGCAATTTTACGCTTCTCTGAAATCTTTGGCATTCATGAACCTCTCAGAAAGGGAGAAAAGAGAGAACATCGGCAACCTATTCCGAGGGATAGATACAAGTCTTTGGATTTTACTGATGATTTTGTAGAAGAGGATGAAGAGGAATTCCTCAAGGGCTTCTCTCAGAGTCTCTCACATACTAAACAAGTTTCTGTAGTTCATAATGATGTATTAGAAAGCAACGATGTTGACTTGGAGTTTCCAAAATTTGGGTTTCTTCATGCGGAGCCCTCAGTGGCTAGGAAAGATGATCATCAATCAAAGGACTCATGTCATAGTGGTGAACCAATGAAAGGGGATTTTGAAGAAGACCTTTCCTGGAATGATCATCCTTTCATATTGACCAACTTTTATCCTCTTGATCAGCAAGACTGGGAAGATGAAATCATTTGGGGCAATTCTCCTGTTCCAAGTAATAATAATATTGAAAGCTGTGAAGTTTCTGGACCTGAGTTGGGAGTTTCTGGTGGCAGTGAAATAGAAATTGAAAGTGGGATCCAGACTATTCAGATGGAACCTTACAAGATACTTGAAGATAAAGATCATAATGTCTCGCTCAGCTCTCCTGTCTCATTGGAGGCCTTTGGCTCAAGGGGTTCTTCTGGAGCTAAAACCAATCTAATATCTAGAAGTCTATTTCACCCCCAACTTTTAAGGTTAGAATCCAGATCTGAAGTGGATAGTTCTAGTCTTGCAGATGGAAAAGACGGGGAAATATGTAAGCATAATCAAAGTAGTCAAATTACGCGTTTTAACAAGGCTATATCACAAAACAGAGACATGATGGAGGGTTCCTGGTTAGACGAGATAATATGGGAGGAGCTTGATCAGCCTATGGTGAAACCAAAGCTTATCTTTGATCTTCAGGATGATCAAATGCATTTTGAAGTTTTGGATAGCAAGGATGATGCGCATCTTTGCCTTCATGCGGGGGCTATAATTTTAACTCGATCTTTAAAATCAAGCAGTGGGGACTCTTCTGAACTTCCAGGACATGGAAGTCAATATGGATGGCGATATGTTTCTAATGACAAACATTATTCAAATCGTAAAACTTCTCAGCAATTGAAATCAAATTCCAAAAAACGCTCAGCTCATGGTGTCAAAGTTTTCCACTCTCAACCTGCTTTGAAGCTGCAGACAATGAAATTGAAGTTGAGCAATAAAGATATTGCAAATTTTCACCGGCCAAAAGCATTATGGTATCCCCATGACAATGAGGTGGCTGTCAAAGAACAAGGGAAATTGCCAACACAAGGACCCATGAAGATCATTATAAAGAGTTTGGGTGGAAAGGGGAGTAAATTGCATGTGGATTCTGAAGAAACTCTCTCAACTGTTAAAGCAAAAGCTTCCAAAAAGCTAGATTTTAAGGCATTGGAAACAGTGAAAATGTTTTATTTAGGAAGGGAGCTTGACGATCAGAAGTCACTTGCTGAACAAAATGTTCGACCAAACTCCTTGCTACATCTTGTTCGTTCAAAGATACATTTGTGGCCAAAAGCACAGAGGGTTCCTGGTGAGAACAAGTCCTTGCGTCCTCCTGGGGCATTCAAGAAAAAGTCTGATATGTCTGTAAAAGATGGACATGTTTTTCTGATGGAGTATTGTGAAGAAAGACCTTTACTTTTGAGCAATGTTGGAATGGGTGCAAGACTTTGTACATACTATCAAAAATGCTCACCGGATGACCAATCTGGCTCTTTATTACGCAACACAGATAGTAGCTTGGGGCACATTATTTCTCTGGATCCTGCTGATAAATCTCCTTTCCTTGGAGATTTGAAACCTGGTTGCTGTCAGTCATCACTAGAGACAAATATGTATAGAGCACCCGTATTTCCTCATAAAGTTCCACTAACTGACTACCTGCTGGTTCGCTCTTCCAAGGGAAAGTTATCATTAAGGCGCATTGATAAAATTAATGTCGTCGGACAGCAGGAGCCACTCATGGAGGTATTTTCACCGGGAAGTAAAAATCTTCAGACTTACATGATGAACAGGCTATTGGTACACATGTGCCGTGAATTCCAAGCAGCTGAGAAGCGGCACTTGCCTCCTTATATCCGTGTCGATGAATTTCTCTCACAGTTTCCTTACCAATCAGAAGCATCACTCCGTAAAAAAATCAAGGAGTATGCAAATTTACAGAGGGGAGCAAATGGACAGTCAATTTTGGTCAAAAAGAGAAATTTCCGCATGTGGTCGGAGGATGAACTGAGAAAAATGGTTCCGCCAGAGCTTGTTTGTGCATATGAAAGCATGCAAGCAGGCCTCTACCGGCTAAGACATTTAGGAATAACTGAAACACACCCTACGAATATTTCATCTGCAATGAGCCGGCTTCCTGATGAAGCAATAGCATTGGCTGCTGCATCACACATTGAGAGGGAACTTCAGATTACTCCTTGGAACTTGAGTAGCAATTTTGTTGCTTGTACAAGCCAGGGTAAGGAAAATATTGAACGTATGGAAATTACTGGTGTTGGTGATCCATCTGGTCGTGGCATGGGTTTCAGCTATGCTCGGGCACCTCCAAAGGCACCAGTGTCTAGTGCAATGGTGAAGAAGAAAGCAGCTGCTAACCGTGGAGGTTCTACTGTTACTGGTACAGATGCTGATCTCCGTAGATTAAGCATGGAGGCTGCACGAGAGGTTCTTCTTAAGTTCAATGTTCCTGAGGAAGTCATTGCAAAACAAACCAGGTGGCATCGCATTGCTATGATACGTAAACTTTCAAGTGAGCAAGCTGCATCTGGGGTTAAGGTTGATCCGACAACTATTAGCAAATATGCTCGTGGCCAGCGAATGTCCTTTCTTCAGTTACAGCAGCAGACTAGAGAGAAATGCCAGGAGATTTGGGATCGACAAGTTCAGAGTCTGTCAGCTGTAAATGCTGATGAGAACGAGAGTGATTCAGAAGGGAATAGTGATCTGGATTCTTTTGCCGGAGATCTGGAAAATTTACTTGATGCTGAGGAGTTTGAAGAGGGAGAAGAGGGTACAAATGACTTAAAACGTGACAAGGGAGACGGTGTTAAGGGTCTCAAAATGAGAAGACGCCCAACTTTGGCTCAGGCAGAGGAGGAAATAGAAGATGAAGCAGCTGAGGCTGCTGAGTTGTGCAGGTTGCTTATGGATGATGATGAAGCTGATAGGAAGAAAAAGAAGAAAACTAAAGTAACGGGGGAAGAAACAAGATTGGTATCAAAGATGCAATCGAAATTTGCCTTTGACAGTGCTGAACTAGTTAAGCCAACAACAAATACTTTACAATTAGATGGAAATAATCCCTTGAAAGAGGATGTGATTACAGATCTTAGGGAGGAGGAAAACTTTGGTGCTAAAAAAAGTAAGTCACTGAAGGCCAATAAAGCAAAGAAGAATGATATTACACCTGTTTCTCTTCCCAATAAAAAAATCAAATTGAATATGGGAGAAGGAATTAAGAACCAGGTGTTTAAGGAGAAAAAACCATCAAGGGAAACTTTTGTTTGTGGAGCATGTGGTCAGCCTGGGCATATGCGAACAAACAAGAACTGTCCAAAATATGGTGAAGATCTTGAAACTCAACTTGAATCTGCAGATATGGAAAAATCATCTGGGAAACCCATAGACCACTCTAGTCACTCCCAGCCTACTAAAGCTCCCTCCAAAAAGTCCATTTCAAAAAGCACCACGAAGATTACTCCTGTTGACAATTCGGCAAAAATTCCACTGAAATTCAAATGCGGCTCCTCAGAGAAATCTTCTGATAAACCTGTAACAGAGACCCTGCAGAATTCTGACAGACCAGTCACTTCGGATTCAGAAACTGCAAAGTCTGCTAAGGTTAATAAGATAATTATTCCCAAAAAAGTGAAGCCAGATGATACACAGGCTGAATCTCGTAAGCATGCTGTTGTTATACGGCCTCCTACTGAATCAAGTAGAGGGCCTCCTCCTACTGATGCAGGCAGAGGTCAGGTTGATTATAACAAGTTACCAATTAAAATACGACCACCAACAGAAATAGATAAGGAGCAAAGTCACAAAAAGATCGTTATAAAACGTACGAAGGAGGTTATTGGTGTGGAACTGGACAGTCCTGGTGGAAACACAGGACTTCAACACAGAAAGACTAAAAGAATTGTTGAATTGTCGAATTTTGAGAAACAAAAGAAACAGGATACCGTGTATGGAACTGGAGGTTTTCCAAAGTGGAACACTAAAGAGGACAGAAGATGGTGGGAAGAGCAAGAGAAACGTAGAAATGATGCAAGACTTCGAGAAGAGGACAGAGCAAGGAGGCATCAGAAAGAAGAAATGAGGATGCTCAAAGAGCAAGAGAGGTTAGATGAAATAAAAAGATTTGAAGAAGATATCAGAAGAGAGAGGGAGGAGGAAGAACGGCAAAAGGCTAAGAAGAAAAAGAAGAAGAAAAAGCCTGATTTAAGAGAGGAGTATTTAGATGATACCAGAGCAAGAAGACATGATAAGAGAATGCCAGAAAGAGAGAGGAGTGGAAAAAGGAGATCTGTTGCTGAGTTAGGAAAGCTTAGTGCAGATTATATGCCACCAACAAAACGCCGAAGAGGGGGAGGGGGAGAGGTTGGTTTGGCAAATATCTTGGAGAGCATTGTGGACACCATTGTGAAAGATAGGTACGAGCTGTCGTATCTTTTCGTGAAGCCAGTGTCGAAGAAAGAGGCTCCTGACTACCTGGACATTATAGATACGCCTATGGATCTTTCGAGAATCAGGGAGAGAGTACGGAACATGGAGTACAAGAGCCGAGAAGATTTCAGGCATGACGTCTGGCAGATTACATACAATGCACATAAATATAACGACGGGAGAAATCCGGGAATTCCTCCCCTTGCAGATATGCTTTTGGAATATTGTGATTATTTGTTGAATGAGAATGATGATAGCCTCACTTCAGCAGAAGCTGGCATTGAAATTAGAGACTTCTAA 5247 0.4149 MKILKLIIYPYLFTYASFVLSEEQEESVVDASKEESALERELHVDSLQTEELDADVQKLEEEGPEVQKRSTAVPLPVLCVEDGVAILRFSEIFGIHEPLRKGEKREHRQPIPRDRYKSLDFTDDFVEEDEEEFLKGFSQSLSHTKQVSVVHNDVLESNDVDLEFPKFGFLHAEPSVARKDDHQSKDSCHSGEPMKGDFEEDLSWNDHPFILTNFYPLDQQDWEDEIIWGNSPVPSNNNIESCEVSGPELGVSGGSEIEIESGIQTIQMEPYKILEDKDHNVSLSSPVSLEAFGSRGSSGAKTNLISRSLFHPQLLRLESRSEVDSSSLADGKDGEICKHNQSSQITRFNKAISQNRDMMEGSWLDEIIWEELDQPMVKPKLIFDLQDDQMHFEVLDSKDDAHLCLHAGAIILTRSLKSSSGDSSELPGHGSQYGWRYVSNDKHYSNRKTSQQLKSNSKKRSAHGVKVFHSQPALKLQTMKLKLSNKDIANFHRPKALWYPHDNEVAVKEQGKLPTQGPMKIIIKSLGGKGSKLHVDSEETLSTVKAKASKKLDFKALETVKMFYLGRELDDQKSLAEQNVRPNSLLHLVRSKIHLWPKAQRVPGENKSLRPPGAFKKKSDMSVKDGHVFLMEYCEERPLLLSNVGMGARLCTYYQKCSPDDQSGSLLRNTDSSLGHIISLDPADKSPFLGDLKPGCCQSSLETNMYRAPVFPHKVPLTDYLLVRSSKGKLSLRRIDKINVVGQQEPLMEVFSPGSKNLQTYMMNRLLVHMCREFQAAEKRHLPPYIRVDEFLSQFPYQSEASLRKKIKEYANLQRGANGQSILVKKRNFRMWSEDELRKMVPPELVCAYESMQAGLYRLRHLGITETHPTNISSAMSRLPDEAIALAAASHIERELQITPWNLSSNFVACTSQGKENIERMEITGVGDPSGRGMGFSYARAPPKAPVSSAMVKKKAAANRGGSTVTGTDADLRRLSMEAAREVLLKFNVPEEVIAKQTRWHRIAMIRKLSSEQAASGVKVDPTTISKYARGQRMSFLQLQQQTREKCQEIWDRQVQSLSAVNADENESDSEGNSDLDSFAGDLENLLDAEEFEEGEEGTNDLKRDKGDGVKGLKMRRRPTLAQAEEEIEDEAAEAAELCRLLMDDDEADRKKKKKTKVTGEETRLVSKMQSKFAFDSAELVKPTTNTLQLDGNNPLKEDVITDLREEENFGAKKSKSLKANKAKKNDITPVSLPNKKIKLNMGEGIKNQVFKEKKPSRETFVCGACGQPGHMRTNKNCPKYGEDLETQLESADMEKSSGKPIDHSSHSQPTKAPSKKSISKSTTKITPVDNSAKIPLKFKCGSSEKSSDKPVTETLQNSDRPVTSDSETAKSAKVNKIIIPKKVKPDDTQAESRKHAVVIRPPTESSRGPPPTDAGRGQVDYNKLPIKIRPPTEIDKEQSHKKIVIKRTKEVIGVELDSPGGNTGLQHRKTKRIVELSNFEKQKKQDTVYGTGGFPKWNTKEDRRWWEEQEKRRNDARLREEDRARRHQKEEMRMLKEQERLDEIKRFEEDIRREREEEERQKAKKKKKKKKPDLREEYLDDTRARRHDKRMPERERSGKRRSVAELGKLSADYMPPTKRRRGGGGEVGLANILESIVDTIVKDRYELSYLFVKPVSKKEAPDYLDIIDTPMDLSRIRERVRNMEYKSREDFRHDVWQITYNAHKYNDGRNPGIPPLADMLLEYCDYLLNENDDSLTSAEAGIEIRDF* 1749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g02037 1748 ProSiteProfiles Ubiquitin domain profile. 519 589 IPR000626 GO:0005515
Phac2g02037 1748 CDD Bromodomain 1633 1729 - -
Phac2g02037 1748 ProSitePatterns Bromodomain signature. 1649 1706 IPR018359 -
Phac2g02037 1748 Coils Coil 21 41 - -
Phac2g02037 1748 SMART ubq_7 519 591 IPR000626 GO:0005515
Phac2g02037 1748 ProSiteProfiles Bromodomain profile. 1644 1714 IPR001487 GO:0005515
Phac2g02037 1748 CDD Ubl_TAFs_like 519 590 - -
Phac2g02037 1748 MobiDBLite consensus disorder prediction 1286 1302 - -
Phac2g02037 1748 FunFam Transcription initiation factor TFIID subunit 1 501 591 - -
Phac2g02037 1748 Coils Coil 1121 1141 - -
Phac2g02037 1748 SUPERFAMILY Ubiquitin-like 489 589 IPR029071 -
Phac2g02037 1748 SMART bromo_6 1623 1734 IPR001487 GO:0005515
Phac2g02037 1748 MobiDBLite consensus disorder prediction 1573 1607 - -
Phac2g02037 1748 Pfam Ubiquitin family 521 592 IPR000626 GO:0005515
Phac2g02037 1748 MobiDBLite consensus disorder prediction 1506 1540 - -
Phac2g02037 1748 MobiDBLite consensus disorder prediction 1380 1401 - -
Phac2g02037 1748 Gene3D - 1628 1741 IPR036427 GO:0005515
Phac2g02037 1748 Coils Coil 1519 1572 - -
Phac2g02037 1748 Pfam Bromodomain 1635 1710 IPR001487 GO:0005515
Phac2g02037 1748 SUPERFAMILY Bromodomain 1614 1735 IPR036427 GO:0005515
Phac2g02037 1748 MobiDBLite consensus disorder prediction 1092 1128 - -
Phac2g02037 1748 Pfam Protein of unknown function (DUF3591) 438 1005 IPR022591 -
Phac2g02037 1748 Gene3D - 501 591 - -
Phac2g02037 1748 PRINTS Bromodomain signature 1647 1660 IPR001487 GO:0005515
Phac2g02037 1748 PRINTS Bromodomain signature 1677 1695 IPR001487 GO:0005515
Phac2g02037 1748 PRINTS Bromodomain signature 1661 1677 IPR001487 GO:0005515
Phac2g02037 1748 PRINTS Bromodomain signature 1695 1714 IPR001487 GO:0005515
Phac2g02037 1748 MobiDBLite consensus disorder prediction 1346 1372 - -
Phac2g02037 1748 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID 21 1746 IPR040240 GO:0001091|GO:0004402|GO:0005669|GO:0006366|GO:0017025
Phac2g02037 1748 MobiDBLite consensus disorder prediction 1303 1330 - -
Phac2g02037 1748 MobiDBLite consensus disorder prediction 1097 1125 - -
Phac2g02037 1748 MobiDBLite consensus disorder prediction 1264 1442 - -
Phac2g02037 1748 MobiDBLite consensus disorder prediction 1553 1607 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g02037 Phac-Chr2 22325557 22351596 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g02037 519 589 Cytoplasmic Ribosomal Protein Gene Family AT3G62250 36.620 2.69e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g02037 K03125 - gmx:100780733 2894.76