Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g02036 ATGGGTTACGATTCGGCTAGCCCCTCGCAGGATGGGAGGGACGAAGATGATGAAGAAGAATATGAGGAGTCTGGCAAGGGTAATCGATTTCTTGGGTTCATGTTTGGAAATGTAGATAATTCTGGCGATCTCGACGTTGACTATCTTGATGAGGATGCAAAGGAGCATCTTTCTGCATTAGCGGATAAGCTGGGTCCTTCACTGACAGATATAGATTTGTCAGGAAAATCACCACAAACACCACCTGATGTTGTTGAACAAGACTGTGATGAAAAAGCTGAAGACGCTGTTGATTATGAAGATATTGATGAAGAGTATGATGGTCCAGAGACAGAAGCTGCCAATGAAGAAGACTATTTATTGCCAAAAAAAGAATTTTTCTCTGCTGAGGCATCTGTATGCTTGGAATCCAAAGCTTCTGTATTTGATGATGAAAATTATGATGAAGAATCTGAGAAGGAGCAAGACTCTCTGAATGAAGATTCTAAAGTTGATAATATATCCTTATCTGAGGAGCAGGAAGAGAGTGTGGTAGATGCATCTAAAGAAGAGAGTGCTCTTGAACGTGAATTACATGTTGACTCACTGCAGACTGAAGAATTGGATGCTGATGTACAAAAACTTGAGGAGGAAGGGCCTGAAGTTCAGAAAAGGTCTACGGCTGTGCCATTGCCTGTTTTATGTGTGGAAGATGGTGTGGCAATTTTACGCTTCTCTGAAATCTTTGGCATTCATGAACCTCTCAGAAAGGGAGAAAAGAGAGAACATCGGCAACCTATTCCGAGGGATAGATACAAGTCTTTGGATTTTACTGATGATTTTGTAGAAGAGGATGAAGAGGAATTCCTCAAGGGCTTCTCTCAGAGTCTCTCACATACTAAACAAGTTTCTGTAGTTCATAATGATGTATTAGAAAGCAACGATGTTGACTTGGAGTTTCCAAAATTTGGGTTTCTTCATGCGGAGCCCTCAGTGGCTAGGAAAGATGATCATCAATCAAAGGACTCATGTCATAGTGGTGAACCAATGAAAGGGGATTTTGAAGAAGACCTTTCCTGGAATGATCATCCTTTCATATTGACCAACTTTTATCCTCTTGATCAGCAAGACTGGGAAGATGAAATCATTTGGGGCAATTCTCCTGTTCCAAGTAATAATAATATTGAAAGCTGTGAAGTTTCTGGACCTGAGTTGGGAGTTTCTGGTGGCAGTGAAATAGAAATTGAAAGTGGGATCCAGACTATTCAGATGGAACCTTACAAGATACTTGAAGATAAAGATCATAATGTCTCGCTCAGCTCTCCTGTCTCATTGGAGGCCTTTGGCTCAAGGGGTTCTTCTGGAGCTAAAACCAATCTAATATCTAGAAGTCTATTTCACCCCCAACTTTTAAGGTTAGAATCCAGATCTGAAGTGGATAGTTCTAGTCTTGCAGATGGAAAAGACGGGGAAATATGTAAGCATAATCAAAGTAGTCAAATTACGCGTTTTAACAAGGCTATATCACAAAACAGAGACATGATGGAGGGTTCCTGGTTAGACGAGATAATATGGGAGGAGCTTGATCAGCCTATGGTGAAACCAAAGCTTATCTTTGATCTTCAGGATGATCAAATGCATTTTGAAGTTTTGGATAGCAAGGATGATGCGCATCTTTGCCTTCATGCGGGGGCTATAATTTTAACTCGATCTTTAAAATCAAGCAGTGGGGACTCTTCTGAACTTCCAGGACATGGAAGTCAATATGGATGGCGATATGTTTCTAATGACAAACATTATTCAAATCGTAAAACTTCTCAGCAATTGAAATCAAATTCCAAAAAACGCTCAGCTCATGGTGTCAAAGTTTTCCACTCTCAACCTGCTTTGAAGCTGCAGACAATGAAATTGAAGTTGAGCAATAAAGATATTGCAAATTTTCACCGGCCAAAAGCATTATGGTATCCCCATGACAATGAGGTGGCTGTCAAAGAACAAGGGAAATTGCCAACACAAGGACCCATGAAGATCATTATAAAGAGTTTGGGTGGAAAGGGGAGTAAATTGCATGTGGATTCTGAAGAAACTCTCTCAACTGTTAAAGCAAAAGCTTCCAAAAAGCTAGATTTTAAGGCATTGGAAACAGTGAAAATGTTTTATTTAGGAAGGGAGCTTGACGATCAGAAGTCACTTGCTGAACAAAATGTTCGACCAAACTCCTTGCTACATCTTGTTCGTTCAAAGATACATTTGTGGCCAAAAGCACAGAGGGTTCCTGGTGAGAACAAGTCCTTGCGTCCTCCTGGGGCATTCAAGAAAAAGTCTGATATGTCTGTAAAAGATGGACATGTTTTTCTGATGGAGTATTGTGAAGAAAGACCTTTACTTTTGAGCAATGTTGGAATGGGTGCAAGACTTTGTACATACTATCAAAAATGCTCACCGGATGACCAATCTGGCTCTTTATTACGCAACACAGATAGTAGCTTGGGGCACATTATTTCTCTGGATCCTGCTGATAAATCTCCTTTCCTTGGAGATTTGAAACCTGGTTGCTGTCAGTCATCACTAGAGACAAATATGTATAGAGCACCCGTATTTCCTCATAAAGTTCCACTAACTGACTACCTGCTGGTTCGCTCTTCCAAGGGAAAGTTATCATTAAGGCGCATTGATAAAATTAATGTCGTCGGACAGCAGGAGCCACTCATGGAGGTATTTTCACCGGGAAGTAAAAATCTTCAGACTTACATGATGAACAGGCTATTGGTACACATGTGCCGTGAATTCCAAGCAGCTGAGAAGCGGCACTTGCCTCCTTATATCCGTGTCGATGAATTTCTCTCACAGTTTCCTTACCAATCAGAAGCATCACTCCGTAAAAAAATCAAGGAGTATGCAAATTTACAGAGGGGAGCAAATGGACAGTCAATTTTGGTCAAAAAGAGAAATTTCCGCATGTGGTCGGAGGATGAACTGAGAAAAATGGTTCCGCCAGAGCTTGTTTGTGCATATGAAAGCATGCAAGCAGGCCTCTACCGGCTAAGACATTTAGGAATAACTGAAACACACCCTACGAATATTTCATCTGCAATGAGCCGGCTTCCTGATGAAGCAATAGCATTGGCTGCTGCATCACACATTGAGAGGGAACTTCAGATTACTCCTTGGAACTTGAGTAGCAATTTTGTTGCTTGTACAAGCCAGGGTAAGGAAAATATTGAACGTATGGAAATTACTGGTGTTGGTGATCCATCTGGTCGTGGCATGGGTTTCAGCTATGCTCGGGCACCTCCAAAGGCACCAGTGTCTAGTGCAATGGTGAAGAAGAAAGCAGCTGCTAACCGTGGAGGTTCTACTGTTACTGGTACAGATGCTGATCTCCGTAGATTAAGCATGGAGGCTGCACGAGAGGTTCTTCTTAAGTTCAATGTTCCTGAGGAAGTCATTGCAAAACAAACCAGGTGGCATCGCATTGCTATGATACGTAAACTTTCAAGTGAGCAAGCTGCATCTGGGGTTAAGGTTGATCCGACAACTATTAGCAAATATGCTCGTGGCCAGCGAATGTCCTTTCTTCAGTTACAGCAGCAGACTAGAGAGAAATGCCAGGAGATTTGGGATCGACAAGTTCAGAGTCTGTCAGCTGTAAATGCTGATGAGAACGAGAGTGATTCAGAAGGGAATAGTGATCTGGATTCTTTTGCCGGAGATCTGGAAAATTTACTTGATGCTGAGGAGTTTGAAGAGGGAGAAGAGGGTACAAATGACTTAAAACGTGACAAGGGAGACGGTGTTAAGGGTCTCAAAATGAGAAGACGCCCAACTTTGGCTCAGGCAGAGGAGGAAATAGAAGATGAAGCAGCTGAGGCTGCTGAGTTGTGCAGGTTGCTTATGGATGATGATGAAGCTGATAGGAAGAAAAAGAAGAAAACTAAAGTAACGGGGGAAGAAACAAGATTGGTATCAAAGATGCAATCGAAATTTGCCTTTGACAGTGCTGAACTAGTTAAGCCAACAACAAATACTTTACAATTAGATGGAAATAATCCCTTGAAAGAGGATGTGATTACAGATCTTAGGGAGGAGGAAAACTTTGGTGCTAAAAAAAGTAAGTCACTGAAGGCCAATAAAGCAAAGAAGAATGATATTACACCTGTTTCTCTTCCCAATAAAAAAATCAAATTGAATATGGGAGAAGGAATTAAGAACCAGGTGTTTAAGGAGAAAAAACCATCAAGGGAAACTTTTGTTTGTGGAGCATGTGGTCAGCCTGGGCATATGCGAACAAACAAGAACTGTCCAAAATATGGTGAAGATCTTGAAACTCAACTTGAATCTGCAGATATGGAAAAATCATCTGGGAAACCCATAGACCACTCTAGTCACTCCCAGCCTACTAAAGCTCCCTCCAAAAAGTCCATTTCAAAAAGCACCACGAAGATTACTCCTGTTGACAATTCGGCAAAAATTCCACTGAAATTCAAATGCGGCTCCTCAGAGAAATCTTCTGATAAACCTGTAACAGAGACCCTGCAGAATTCTGACAGACCAGTCACTTCGGATTCAGAAACTGCAAAGTCTGCTAAGGTTAATAAGATAATTATTCCCAAAAAAGTGAAGCCAGATGATACACAGGCTGAATCTCGTAAGCATGCTGTTGTTATACGGCCTCCTACTGAATCAAGTAGAGGGCCTCCTCCTACTGATGCAGGCAGAGGTCAGGTTGATTATAACAAGTTACCAATTAAAATACGACCACCAACAGAAATAGATAAGGAGCAAAGTCACAAAAAGATCGTTATAAAACGTACGAAGGAGGTTATTGGTGTGGAACTGGACAGTCCTGGTGGAAACACAGGACTTCAACACAGAAAGACTAAAAGAATTGTTGAATTGTCGAATTTTGAGAAACAAAAGAAACAGGATACCGTGTATGGAACTGGAGGTTTTCCAAAGTGGAACACTAAAGAGGACAGAAGATGGTGGGAAGAGCAAGAGAAACGTAGAAATGATGCAAGACTTCGAGAAGAGGACAGAGCAAGGAGGCATCAGAAAGAAGAAATGAGGATGCTCAAAGAGCAAGAGAGGTTAGATGAAATAAAAAGATTTGAAGAAGATATCAGAAGAGAGAGGGAGGAGGAAGAACGGCAAAAGGCTAAGAAGAAAAAGAAGAAGAAAAAGCCTGATTTAAGAGAGGAGTATTTAGATGATACCAGAGCAAGAAGACATGATAAGAGAATGCCAGAAAGAGAGAGGAGTGGAAAAAGGAGATCTGTTGCTGAGTTAGGAAAGCTTAGTGCAGATTATATGCCACCAACAAAACGCCGAAGAGGGGGAGGGGGAGAGGTTGGTTTGGCAAATATCTTGGAGAGCATTGTGGACACCATTGTGAAAGATAGGTACGAGCTGTCGTATCTTTTCGTGAAGCCAGTGTCGAAGAAAGAGGCTCCTGACTACCTGGACATTATAGATACGCCTATGGATCTTTCGAGAATCAGGGAGAGAGTACGGAACATGGAGTACAAGAGCCGAGAAGATTTCAGGCATGACGTCTGGCAGATTACATACAATGCACATAAATATAACGACGGGAGAAATCCGGGAATTCCTCCCCTTGCAGATATGCTTTTGGAATATTGTGATTATTTGTTGAATGAGAATGATGATAGCCTCACTTCAGCAGAAGCTGGCATTGAAATTAGAGACTTCTAA 5694 0.4152 MGYDSASPSQDGRDEDDEEEYEESGKGNRFLGFMFGNVDNSGDLDVDYLDEDAKEHLSALADKLGPSLTDIDLSGKSPQTPPDVVEQDCDEKAEDAVDYEDIDEEYDGPETEAANEEDYLLPKKEFFSAEASVCLESKASVFDDENYDEESEKEQDSLNEDSKVDNISLSEEQEESVVDASKEESALERELHVDSLQTEELDADVQKLEEEGPEVQKRSTAVPLPVLCVEDGVAILRFSEIFGIHEPLRKGEKREHRQPIPRDRYKSLDFTDDFVEEDEEEFLKGFSQSLSHTKQVSVVHNDVLESNDVDLEFPKFGFLHAEPSVARKDDHQSKDSCHSGEPMKGDFEEDLSWNDHPFILTNFYPLDQQDWEDEIIWGNSPVPSNNNIESCEVSGPELGVSGGSEIEIESGIQTIQMEPYKILEDKDHNVSLSSPVSLEAFGSRGSSGAKTNLISRSLFHPQLLRLESRSEVDSSSLADGKDGEICKHNQSSQITRFNKAISQNRDMMEGSWLDEIIWEELDQPMVKPKLIFDLQDDQMHFEVLDSKDDAHLCLHAGAIILTRSLKSSSGDSSELPGHGSQYGWRYVSNDKHYSNRKTSQQLKSNSKKRSAHGVKVFHSQPALKLQTMKLKLSNKDIANFHRPKALWYPHDNEVAVKEQGKLPTQGPMKIIIKSLGGKGSKLHVDSEETLSTVKAKASKKLDFKALETVKMFYLGRELDDQKSLAEQNVRPNSLLHLVRSKIHLWPKAQRVPGENKSLRPPGAFKKKSDMSVKDGHVFLMEYCEERPLLLSNVGMGARLCTYYQKCSPDDQSGSLLRNTDSSLGHIISLDPADKSPFLGDLKPGCCQSSLETNMYRAPVFPHKVPLTDYLLVRSSKGKLSLRRIDKINVVGQQEPLMEVFSPGSKNLQTYMMNRLLVHMCREFQAAEKRHLPPYIRVDEFLSQFPYQSEASLRKKIKEYANLQRGANGQSILVKKRNFRMWSEDELRKMVPPELVCAYESMQAGLYRLRHLGITETHPTNISSAMSRLPDEAIALAAASHIERELQITPWNLSSNFVACTSQGKENIERMEITGVGDPSGRGMGFSYARAPPKAPVSSAMVKKKAAANRGGSTVTGTDADLRRLSMEAAREVLLKFNVPEEVIAKQTRWHRIAMIRKLSSEQAASGVKVDPTTISKYARGQRMSFLQLQQQTREKCQEIWDRQVQSLSAVNADENESDSEGNSDLDSFAGDLENLLDAEEFEEGEEGTNDLKRDKGDGVKGLKMRRRPTLAQAEEEIEDEAAEAAELCRLLMDDDEADRKKKKKTKVTGEETRLVSKMQSKFAFDSAELVKPTTNTLQLDGNNPLKEDVITDLREEENFGAKKSKSLKANKAKKNDITPVSLPNKKIKLNMGEGIKNQVFKEKKPSRETFVCGACGQPGHMRTNKNCPKYGEDLETQLESADMEKSSGKPIDHSSHSQPTKAPSKKSISKSTTKITPVDNSAKIPLKFKCGSSEKSSDKPVTETLQNSDRPVTSDSETAKSAKVNKIIIPKKVKPDDTQAESRKHAVVIRPPTESSRGPPPTDAGRGQVDYNKLPIKIRPPTEIDKEQSHKKIVIKRTKEVIGVELDSPGGNTGLQHRKTKRIVELSNFEKQKKQDTVYGTGGFPKWNTKEDRRWWEEQEKRRNDARLREEDRARRHQKEEMRMLKEQERLDEIKRFEEDIRREREEEERQKAKKKKKKKKPDLREEYLDDTRARRHDKRMPERERSGKRRSVAELGKLSADYMPPTKRRRGGGGEVGLANILESIVDTIVKDRYELSYLFVKPVSKKEAPDYLDIIDTPMDLSRIRERVRNMEYKSREDFRHDVWQITYNAHKYNDGRNPGIPPLADMLLEYCDYLLNENDDSLTSAEAGIEIRDF* 1898
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g02036 1897 CDD Bromodomain 1782 1878 - -
Phac2g02036 1897 Coils Coil 170 190 - -
Phac2g02036 1897 MobiDBLite consensus disorder prediction 1 29 - -
Phac2g02036 1897 MobiDBLite consensus disorder prediction 156 189 - -
Phac2g02036 1897 SMART bromo_6 1772 1883 IPR001487 GO:0005515
Phac2g02036 1897 MobiDBLite consensus disorder prediction 1702 1756 - -
Phac2g02036 1897 FunFam Transcription initiation factor TFIID subunit 1 650 740 - -
Phac2g02036 1897 MobiDBLite consensus disorder prediction 1413 1591 - -
Phac2g02036 1897 SUPERFAMILY TAF(II)230 TBP-binding fragment 24 62 IPR036741 -
Phac2g02036 1897 MobiDBLite consensus disorder prediction 1495 1521 - -
Phac2g02036 1897 CDD Ubl_TAFs_like 668 739 - -
Phac2g02036 1897 MobiDBLite consensus disorder prediction 1452 1479 - -
Phac2g02036 1897 MobiDBLite consensus disorder prediction 1241 1277 - -
Phac2g02036 1897 ProSiteProfiles Bromodomain profile. 1793 1863 IPR001487 GO:0005515
Phac2g02036 1897 Pfam TATA box-binding protein binding 18 61 IPR009067 -
Phac2g02036 1897 PRINTS Bromodomain signature 1826 1844 IPR001487 GO:0005515
Phac2g02036 1897 PRINTS Bromodomain signature 1844 1863 IPR001487 GO:0005515
Phac2g02036 1897 PRINTS Bromodomain signature 1810 1826 IPR001487 GO:0005515
Phac2g02036 1897 PRINTS Bromodomain signature 1796 1809 IPR001487 GO:0005515
Phac2g02036 1897 SUPERFAMILY Bromodomain 1763 1884 IPR036427 GO:0005515
Phac2g02036 1897 MobiDBLite consensus disorder prediction 1529 1550 - -
Phac2g02036 1897 Gene3D - 1777 1890 IPR036427 GO:0005515
Phac2g02036 1897 SMART ubq_7 668 740 IPR000626 GO:0005515
Phac2g02036 1897 Coils Coil 1668 1721 - -
Phac2g02036 1897 MobiDBLite consensus disorder prediction 1655 1689 - -
Phac2g02036 1897 MobiDBLite consensus disorder prediction 1246 1274 - -
Phac2g02036 1897 MobiDBLite consensus disorder prediction 1722 1756 - -
Phac2g02036 1897 SUPERFAMILY Ubiquitin-like 638 738 IPR029071 -
Phac2g02036 1897 ProSiteProfiles Ubiquitin domain profile. 668 738 IPR000626 GO:0005515
Phac2g02036 1897 Pfam Protein of unknown function (DUF3591) 587 1154 IPR022591 -
Phac2g02036 1897 Pfam Ubiquitin family 670 741 IPR000626 GO:0005515
Phac2g02036 1897 Coils Coil 1270 1290 - -
Phac2g02036 1897 MobiDBLite consensus disorder prediction 139 189 - -
Phac2g02036 1897 Pfam Bromodomain 1784 1859 IPR001487 GO:0005515
Phac2g02036 1897 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID 13 1895 IPR040240 GO:0001091|GO:0004402|GO:0005669|GO:0006366|GO:0017025
Phac2g02036 1897 MobiDBLite consensus disorder prediction 1435 1451 - -
Phac2g02036 1897 ProSitePatterns Bromodomain signature. 1798 1855 IPR018359 -
Phac2g02036 1897 Gene3D - 22 68 IPR036741 -
Phac2g02036 1897 MobiDBLite consensus disorder prediction 88 114 - -
Phac2g02036 1897 Gene3D - 650 740 - -
Phac2g02036 1897 MobiDBLite consensus disorder prediction 66 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g02036 Phac-Chr2 22325557 22351596 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g02036 668 738 Cytoplasmic Ribosomal Protein Gene Family AT3G62250 36.620 3.38e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g02036 K03125 - gmx:100780733 3203.69