Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Phac2g02033 | ATGTCTCTCCTCAGCAGATTCTTCTACAAGCGTCCCCCTGATGGCTTACTGGAATTCGCGGACAGAGTCTATGTATTCGATTCCTGCTTCTCCACCGAAGCGCTCCCTGAGGGAATGTACCAGCTCTACCTCCGCCAAATCCTCTCCGATCTCCACGAGGACTTCCCGGAATCCTCCTTCCTCGCCCTCAACTTCCGCGACGGTCACACCCGCAGCCGCTTCTCACGCCTCCTCTGCGACCTCGACGCCACTGTCATCGACTACCCCAAGCAGTACGAGGGCTGCCCCCTCCTCCCCCTCGCCCTCCTCCACCACTTCCTCCGCCTCTGTGACACCTGCCTCGCTGACCCCGCCGCCGTGGTCCTCTTCCACTGTGAGCGCGGCGGCTGGCCCCTCCTCGCCTTTCTCCTCGCTGCTTTCCTCGTTTTCCGGAAGGCGCAGAGCGGGGAGCGCAAGATTCTAGAGATGGTTCACAGGGAGGCGCCGAAGGGGCTGCTGCAGCTGCTGTCGGCGCTCAACCCGATGCCGTCGCAGCTGCGGTACGTGCAGTATGTGGCGCGGAGGAACATTGGCGCAGAGTGGCCTCCGCCGGAGAGGGCGCTTTCTCTGGATTGTGTGATACTAAGAGGGGTTCCTGGGTTTGATGGGGGGAATGGTTGCAGGCCGTTTTTTAGGATTTTTGGGAGGAATTTGCTTAGTAAAGGCGGGCTTTCCACGCAGATGATTTATAATATGCATAAGAAGAAGAAGAGTTTGAGGCACTATAGACAGGCAGACTGTGATGTGATTAAGATTGATATTCAATGCTTAGTACAAGGGGATGTGGTATTGGAGTGTGTGCATTTGGATTTGGATCCAGAGAGGGAGGTGATGATGTTTCGAGTGATGTTCAACACTGCGTTCATTCGATCAAACATTTTGATGCTGAATGCTGAGAACTTGGACATTCTGTGGGATTCAAAGGAGCGGTATCCAAAGGGCTTCCGGGCTGAGGTTTTGTTTGGGGAGGTTGAAAACATAAGTCCTCAAAGGGCTCCCACAAGTATTTTAGATGGCGAGGTGAAAGGTGGATTACCCATTGAGGCATTTTCAAGGGTTCAAGAACTTTTCAGTGGCGCAGAATGGATTGACAGTGGTGATTCTGCTGCTGTATGGCTGCTCAAGCAGCTTACAGTCTTAAATGACCCCAAAGAGTTTTCAAGGTTTCAGGGTAGAGGAAGTTGGTATTCATCACCCGCTGACTCTGAAGAAGAAAACAATGAATCGAGCACTGCTGATAGTTCAGATGAGGCCTTTGATGTTATTCCTAGGTCTTATGCTGATCCTTCAAAATTATTTACATCTGACACACCTGATTTGGTCCATTTAACTTTTGAAAATAACGGTGGAGATTATGTAAATCTAACTTCAACAACACCTAATCAGTCACTAACTGATGATGTTTCATTACCTCTTCATGCTCTAAGTAAGGAATCTTCTCCTTGTTTGTCTCCACCATCACCTTCACATGTTCCCGCTACTCAACCTCTTCATATACCAGCACCACTGCCTCCATCATCAATACCTGTACAGCCAGGTTTAGCTCCTCCCCATCCTCCCCCACCTCTGCATCCTTTAGTTCAGAATCTGAACAATGCTTCTACATTGCCTTCACCTCCTCCTCCACCCACTCTCCCCCCTATAGGTAGGGATGCGAATAGCTCTCCTGGTTTACCTCCACATCCTCTAGGATCTGTACAAACAAGTTCAGCCCCTCCACCACCACCTCCTCCTCCTCCTCTTCCTCCTGCTCCAGTACCTGTACAAAAAAATTTAGTCCCTCCACCACCACCTCCTCCTCCTCCTCTTCCTCCTGCTCCAGTACCTGTACAAAAAAATTTAGTCCCTCCACCTCCTCCTCCTCCTCCAGGTCCTGTGCAAACAGTCTCAGCCCCACCACCACCACCACCTCCACCTCCTCCAGGTCTTGTACAAACAGGTTCTGTCCCGCCACCACCTCCACCTCCTCCTGGTCCTGGTCCTGTACGAACAGGTTCAGCTCCACCTCCACCTCCACCCCCTCCAGGTTCAGCTCCACCACCACCTCCACCTCCTCCAGGTCCTGTACGAACAGGTTCAGCTGCACCACCACCTCCACCTCCTCCAGGTCCTGTACGCACAGGTTCAGCTGCACCACCACCTCCACCTCCTCCAGGTCCTGCACAAACAGGTTCGGCCCCACCACTGGCACCAAAGCCCCCAGGTGCTCCTCCTCCTCCACCTGGTCGTGGTGCATCTCCAATGCCACCTCCACCTCCTGCAGCTACAGGCTCTGGTGTGGCACCACCACCTGGCAAAGCTTCAACAACAAATGTTGGTAGAGGTCATGGTATTGGTGTTAATGTTAATGCTCCAAAGAAAACTTTGCTAAAACCCCTACACTGGGTGAAAGTGGCCCGAGCAGCCAAGGGAAGTCTATGGGCAGATTCACAGAAACAGGATAGCGGACCAAGGGCCCCTGAGATAGATATATCAGAACTTGAGACCCTGTTTTCAGCAGCATCTGCATCTGATGGGAGTAGTACTAAAGGTGGAGGTCGTCGTGGTCCTAATATTAACAAACCGGAGAAAGTACAATTGGTTGACTTGCGTAGAGCATATAACTGTGAAATAATGCTCTCTAAAATCAAAATTCCTTTGCCAGATATGCTTAAAGCGGTACTGGCATTGGATTCTTTAGTTCTTGATATTGATCAGGTTGAGAATCTCATCAAGTTCTGTCCAACAAAGGAAGAGATGGAAGTGTTAAAGAATTATACAGGAAACAAGGAAATGCTTGGCAAGTGTGAACAGTTTTTTATGGAGCTGATGAAAGTTCCACGTGTGGAATCCAAATTAAGGGTTTTTGCTTTTAAAATCACCTTTTCTTCGCAGGTAAACGATTTGAAGGTAAATTTGAACACAATCAACAATGCAGCCAGAGAGGTGAAAGAATCTGGAAAATTGCGTCAAATAATGCAGACTATTCTTACTCTGGGAAATGCATTGAATCAAGGAACAGCACGGGGATCAGCTGTTGGATTCAAATTGGATAGCCTTCTTAAATTATCTGATACTCGTGCAAGAAATAATAAAATGACTTTAATGCATTATTTGTGTAAGCTTCTTGCGGAGAAAATGCCAGAATTGCTAGATTTTGATAAGGATCTTGTCCATTTGGAAGCAGCTTCTAAGATTCAACTAAAAGCATTGGCTGAAGAAATGCAAGCTGTGAGTAAAGGTTTAGAGAAAGTTGAGCAAGAACTCGCTGCTTCTGAAAATGATGGTGCTATATCTACAGGATTTCGTAAGGTGTTGAAGAATTTTCTTGATATTGCTGAAGCTGACGTGAGGTCCCTTATATCATTGTATTCGGAAGTGGGAAGAAGTGCAGACTCTTTGTCACAGTACTTTGGAGAGGATCCAGCTAGATGCCCCTTTGAACAAGGTTTGGTGTTCTCTACAGTCTACAGACTCCACACATGCACAATATCTGAGTTTTTTTAA | 3525 | 0.4854 | MSLLSRFFYKRPPDGLLEFADRVYVFDSCFSTEALPEGMYQLYLRQILSDLHEDFPESSFLALNFRDGHTRSRFSRLLCDLDATVIDYPKQYEGCPLLPLALLHHFLRLCDTCLADPAAVVLFHCERGGWPLLAFLLAAFLVFRKAQSGERKILEMVHREAPKGLLQLLSALNPMPSQLRYVQYVARRNIGAEWPPPERALSLDCVILRGVPGFDGGNGCRPFFRIFGRNLLSKGGLSTQMIYNMHKKKKSLRHYRQADCDVIKIDIQCLVQGDVVLECVHLDLDPEREVMMFRVMFNTAFIRSNILMLNAENLDILWDSKERYPKGFRAEVLFGEVENISPQRAPTSILDGEVKGGLPIEAFSRVQELFSGAEWIDSGDSAAVWLLKQLTVLNDPKEFSRFQGRGSWYSSPADSEEENNESSTADSSDEAFDVIPRSYADPSKLFTSDTPDLVHLTFENNGGDYVNLTSTTPNQSLTDDVSLPLHALSKESSPCLSPPSPSHVPATQPLHIPAPLPPSSIPVQPGLAPPHPPPPLHPLVQNLNNASTLPSPPPPPTLPPIGRDANSSPGLPPHPLGSVQTSSAPPPPPPPPPLPPAPVPVQKNLVPPPPPPPPPLPPAPVPVQKNLVPPPPPPPPGPVQTVSAPPPPPPPPPPGLVQTGSVPPPPPPPPGPGPVRTGSAPPPPPPPPGSAPPPPPPPPGPVRTGSAAPPPPPPPGPVRTGSAAPPPPPPPGPAQTGSAPPLAPKPPGAPPPPPGRGASPMPPPPPAATGSGVAPPPGKASTTNVGRGHGIGVNVNAPKKTLLKPLHWVKVARAAKGSLWADSQKQDSGPRAPEIDISELETLFSAASASDGSSTKGGGRRGPNINKPEKVQLVDLRRAYNCEIMLSKIKIPLPDMLKAVLALDSLVLDIDQVENLIKFCPTKEEMEVLKNYTGNKEMLGKCEQFFMELMKVPRVESKLRVFAFKITFSSQVNDLKVNLNTINNAAREVKESGKLRQIMQTILTLGNALNQGTARGSAVGFKLDSLLKLSDTRARNNKMTLMHYLCKLLAEKMPELLDFDKDLVHLEAASKIQLKALAEEMQAVSKGLEKVEQELAASENDGAISTGFRKVLKNFLDIAEADVRSLISLYSEVGRSADSLSQYFGEDPARCPFEQGLVFSTVYRLHTCTISEFF* | 1175 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Phac2g02033 | 1174 | Coils | Coil | 1074 | 1101 | - | - | |
| Phac2g02033 | 1174 | MobiDBLite | consensus disorder prediction | 404 | 431 | - | - | |
| Phac2g02033 | 1174 | MobiDBLite | consensus disorder prediction | 846 | 868 | - | - | |
| Phac2g02033 | 1174 | SUPERFAMILY | Formin homology 2 domain (FH2 domain) | 806 | 1154 | - | - | |
| Phac2g02033 | 1174 | SMART | PTEN_C2_2 | 196 | 336 | IPR014020 | - | |
| Phac2g02033 | 1174 | Pfam | C2 domain of PTEN tumour-suppressor protein | 197 | 335 | IPR014020 | - | |
| Phac2g02033 | 1174 | Gene3D | - | 195 | 340 | - | - | |
| Phac2g02033 | 1174 | Gene3D | Protein tyrosine phosphatase superfamily | 15 | 189 | IPR029021 | - | |
| Phac2g02033 | 1174 | MobiDBLite | consensus disorder prediction | 498 | 539 | - | - | |
| Phac2g02033 | 1174 | Coils | Coil | 972 | 992 | - | - | |
| Phac2g02033 | 1174 | FunFam | Formin-like protein | 792 | 1167 | - | - | |
| Phac2g02033 | 1174 | PRINTS | Proline rich extensin signature | 552 | 569 | - | - | |
| Phac2g02033 | 1174 | PRINTS | Proline rich extensin signature | 513 | 534 | - | - | |
| Phac2g02033 | 1174 | PRINTS | Proline rich extensin signature | 498 | 510 | - | - | |
| Phac2g02033 | 1174 | PRINTS | Proline rich extensin signature | 589 | 614 | - | - | |
| Phac2g02033 | 1174 | Pfam | Formin Homology 2 Domain | 798 | 1155 | IPR015425 | - | |
| Phac2g02033 | 1174 | ProSiteProfiles | Formin homology-2 (FH2) domain profile. | 793 | 1174 | IPR015425 | - | |
| Phac2g02033 | 1174 | MobiDBLite | consensus disorder prediction | 548 | 562 | - | - | |
| Phac2g02033 | 1174 | MobiDBLite | consensus disorder prediction | 579 | 772 | - | - | |
| Phac2g02033 | 1174 | SMART | it6_source | 526 | 1173 | IPR015425 | - | |
| Phac2g02033 | 1174 | Gene3D | Formin, FH2 domain | 793 | 1167 | IPR042201 | - | |
| Phac2g02033 | 1174 | MobiDBLite | consensus disorder prediction | 404 | 418 | - | - | |
| Phac2g02033 | 1174 | MobiDBLite | consensus disorder prediction | 846 | 860 | - | - | |
| Phac2g02033 | 1174 | ProSiteProfiles | C2 tensin-type domain profile. | 198 | 337 | IPR014020 | - | |
| Phac2g02033 | 1174 | PANTHER | FORMIN-J | 725 | 1160 | - | - | |
| Phac2g02033 | 1174 | MobiDBLite | consensus disorder prediction | 489 | 795 | - | - | |
| Phac2g02033 | 1174 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 198 | 337 | IPR035892 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Phac2g02033 | Phac-Chr2 | 22299702 | 22310792 | Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Phac2g02033 | 755 | 1163 | FH2 protein (formin) Gene Family | AT1G31810 | 77.482 | 0.0 | 631 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Phac2g02033 | - | - | adu:107487096 | 1462.2 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Phac2g02033 | 2 | 22299702 | 22310792 | Phac2g02033 | 2 | 22299702 | 22310792 | ECH |