Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g01981 ATGGGGTCCAGTGGCAGCAAAGCCACGTCATCGTCGTCGTCTTCGGGGAGTTTCAGGAAGGGTCGATCTAAGGGGCACAGAGGTTTCCCGTCTTATTGTCTGGGAACGTCGTCTGGATCTCGTGACATTGATAGTGACGACCAGGTTTGTGATCAGAATAAAGTGAATGGAGATGATGTGACATACACCAGTGGCAATGAAATAGACTCAGATGAAGGGAAGACAGAGTCCTTTAGGAAGGTGAAACCGGATAAATCTGATGAAGTGCCTTCTAACATTGACCTTGAGGAGTGGCGTCACAGTGCATCCAGAACTGGTAGCAGCTCTGCACATTCTTCTTCAAATCAGTCCTTGAACCCCTCAAGTCGGTTCCTATCTCGCTTTAGCCTTGTTCCTGGTAATATAAGCTTCAGACTTAGCAGAACCACAAGTTTGGGATCATCTAGGCCTTGCCCGGTTTCTTCAACTAGTCTCTCAATATATGATGAAGGTGAGCTTAGTTTGCATCCAGGGCCTCCTGGCAGCTTGATTAATAGAAATGAAAATCAACACCGTAGTGGTTTGCTCAATGCATCTTTTGTTAGTCAAGTGCCTAGGCAGTGTCATGAAGAAACCTCTAATAGTTTACGACCTAATGCGCCACCATTGGTTTCACCTGGTAATTTGGTTGGCAGTCGCCCACTTTCTTCTGTCCAGGATGTGGCTAGAGATGGAAATGTTGCAAGAGAAGTGCCTGATGTCAACATGTTTTCTCCAAGAATTCATACTGACACAGAAAATGTTGAGACTAGACATGCTGATAGAAGAAATGGAGCTCGAGAACCTGTCGAGCGTAATGTTCGTTTTAGCCGAACTTTAAGTGTTGGAAGGCTCCGTGACAGAGTTCTCCGGCGATCAACATTGTCAGACTTCACTTTTTGCCCTATGCAAAGAGAGAGAGAAGCAAGAGATGCTGGTCAAGAGAATGAAAGACGAGTGGGGGATAGAGACACAAGAGTGTCATCAACTGGTCGTAATGCTTCAAATTCTTCTACACCTAGATATCCTCTGCCCAGTACACCAAGCTCCTTGTTTGGCATCCAAGACTATGAAGTTGAGCCGTCACGTTCTAGAGAAACTAGGTATCAGGATCTGCTGGAACATAGGTCCAATTTCCTGGAACGGAGAAGAAGAATACGGTCCCAGGTCCGTGCTCTTCAGCGGTTGGGTAGCCGGTTTGAAAATCTTTCTGGACATGACAGATCATGTATCTTATCTGGTCAACACAGAAACGGTCGTTGTGCATGCAGAACCAATAGTCGTGATACCAATTCAAATGATGATACCAATGCTAGAGCTAGCATATCAAGAATTGTTATGCTAGCTGAAGCCTTATTTGAACAATCTGTGGTTTTATCTTCTCGCCCTTCTGTGTCATCTATTGGTTCCGTTCCTGCACCTAATGAAGTTGTGGAATCCTTGCCTGTCAAATTATACAAAAAGTTGCACAAACATCAAGAAGAACCTGTACAATGTTATATATGCCTTGTGGAGTATGAGGATGGAGACAGCATGAGAGTTCTGCCTTGTCATCATGAATTTCATACAACATGTATAGACAAGTGGCTGAAAGAGATTCACAGGGTGTGCCCGCTATGTCGAGGGGATATCTGTGTATCTGATTCACTGCCAAGGGAGAACTAA 1683 0.448 MGSSGSKATSSSSSSGSFRKGRSKGHRGFPSYCLGTSSGSRDIDSDDQVCDQNKVNGDDVTYTSGNEIDSDEGKTESFRKVKPDKSDEVPSNIDLEEWRHSASRTGSSSAHSSSNQSLNPSSRFLSRFSLVPGNISFRLSRTTSLGSSRPCPVSSTSLSIYDEGELSLHPGPPGSLINRNENQHRSGLLNASFVSQVPRQCHEETSNSLRPNAPPLVSPGNLVGSRPLSSVQDVARDGNVAREVPDVNMFSPRIHTDTENVETRHADRRNGAREPVERNVRFSRTLSVGRLRDRVLRRSTLSDFTFCPMQREREARDAGQENERRVGDRDTRVSSTGRNASNSSTPRYPLPSTPSSLFGIQDYEVEPSRSRETRYQDLLEHRSNFLERRRRIRSQVRALQRLGSRFENLSGHDRSCILSGQHRNGRCACRTNSRDTNSNDDTNARASISRIVMLAEALFEQSVVLSSRPSVSSIGSVPAPNEVVESLPVKLYKKLHKHQEEPVQCYICLVEYEDGDSMRVLPCHHEFHTTCIDKWLKEIHRVCPLCRGDICVSDSLPREN* 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g01981 560 ProSiteProfiles Zinc finger RING-type profile. 505 547 IPR001841 -
Phac2g01981 560 FunFam Putative RING zinc finger domain superfamily protein 474 552 - -
Phac2g01981 560 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 468 552 IPR013083 -
Phac2g01981 560 MobiDBLite consensus disorder prediction 54 68 - -
Phac2g01981 560 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 559 - -
Phac2g01981 560 MobiDBLite consensus disorder prediction 1 19 - -
Phac2g01981 560 MobiDBLite consensus disorder prediction 102 121 - -
Phac2g01981 560 MobiDBLite consensus disorder prediction 197 214 - -
Phac2g01981 560 MobiDBLite consensus disorder prediction 69 101 - -
Phac2g01981 560 MobiDBLite consensus disorder prediction 333 359 - -
Phac2g01981 560 SUPERFAMILY RING/U-box 483 553 - -
Phac2g01981 560 MobiDBLite consensus disorder prediction 197 227 - -
Phac2g01981 560 MobiDBLite consensus disorder prediction 312 332 - -
Phac2g01981 560 MobiDBLite consensus disorder prediction 312 359 - -
Phac2g01981 560 MobiDBLite consensus disorder prediction 1 121 - -
Phac2g01981 560 Pfam Ring finger domain 504 547 IPR001841 -
Phac2g01981 560 SMART ring_2 505 546 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g01981 Phac-Chr2 21829884 21835382 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g01981 231 554 C3H Transcription Factor Family AT5G45290 59.882 4.55e-111 340
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g01981 - - gmx:100815830 901.738
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac2g01981 2 21829884 21835382 Phac2g01981 2 21829884 21835382 ECH