Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g01979 ATGAAGAGCATAAACGACGACGGTTCCACGCAAGATCTCGACCCTCAGAGCGATCACAGCTCCGATTACTTAGCTCACCCTAACTCTAACCCACACCCTCACCCTCACACGCGCCGTCCGCGGGGTTTCGCGGCGGCGGCGGCGGCCACCACCAATTCCGTCGCCAAGGGAAAGAAGGAGAGAGAGAAGGAGAAGGAGCGCACCAAGCTCCGCGAGCGACACCGCCGAGCCATCACAAGCCGCATGCTCGCAGGCCTCCGCCAGTACGGCAATTTCCCCCTGCCGGCGCGTGCCGATATGAACGACGTACTCGCCGCTCTAGCGCGTGAGGCTGGTTGGGTTGTTGACGCCGATGGCACCACCTACCGCCAGTGTCCCCCTCCCTCTCACATGGGGTCGTTTGCGGCTAAATCAGTTGAAAGTCAACTCTCTGGTGGTTCTTTGAGGAATTGTTCTGTTAAGGAAACGATTGAGAACCAGACATCTGTGCTTAGGATTGATGAATGCTTGTCGCCTGCATCCATTGATTCTGTTGTAATTGCAGAAAGGGACTCAAGGAACGAGAAATATACAAATGCAAGCCCCATCAATGCTGTTGACTGCTTGGAGGCTGATCAGCTTATGCAAGATATTCATTCTGGGGTGCATGAAAATGATTTTACTGGCACACCATATGTTCCTGTTTATGTAAAGCTTCCAGCTGGTATTATTAACAAATTTTGCCAGTTGATTGATCCTGAAGGCATTAGGGAGGAGCTAATGCATATGAAGTCTTTAAATGTAGATGGTGTTGTTGTGGATTGTTGGTGGGGCATTGTTGAAGGCTGGAGCTCACAGAAATATGTGTGGTCTGGCTATAGGGAGCTTTTTAACATAGTTAGAAAGTTCAAACTGAAGTTACAGGTTGTTATGGCATTTCATGAATGTGGAGGGAATGATTCTAGTGATGCATTGATTTCCCTCCCACAATGGGTTTTGGATATTGGAAAAGACAACCAGGATATATTCTTCACAGATCGTGAAGGACGGAGGAATACCGAATGCCTTTCTTGGGGGATTGACAAAGAAAGAGTTCTCAAAGGCAGAACTGGAATTGAGGTCTATTTTGATATGATGAGAAGCTTTCGGACAGAGTTTGATGACCTGTTTGCAGAAGGTCTGATTTATGCTGTTGAAGTTGGACTTGGAGCATCCGGAGAGCTGAAATATCCTTCTTTCTCAGAAAGAATGGGATGGAGGTATCCTGGTATCGGTGAGTTTCAGTGCTATGATAAGTATCTGCAACATAGTCTGCGGAAAGCAGCCAAATTACGTGGTCACTCTTTCTGGGCTAGAGGACCTGATAATGCTGGACATTACAATTCTATGCCGCATGAAACTGGATTCTTTTGTGAGCGAGGTGATTATGACAATTACTATGGACGATTCTTCCTACATTGGTACTCCCAGACATTAATAGACCATGCAGATAATGTTTTGTCTCTTGCAACCCTTGCTTTCGAGGAGACAAAAATAATTGTTAAGGTAGTGTTCCTGGTATATCAGTTTTTTTCTCCGGTAGTTTTGTCTAGGTCGTATGACTAA 1584 0.4665 MKSINDDGSTQDLDPQSDHSSDYLAHPNSNPHPHPHTRRPRGFAAAAAATTNSVAKGKKEREKEKERTKLRERHRRAITSRMLAGLRQYGNFPLPARADMNDVLAALAREAGWVVDADGTTYRQCPPPSHMGSFAAKSVESQLSGGSLRNCSVKETIENQTSVLRIDECLSPASIDSVVIAERDSRNEKYTNASPINAVDCLEADQLMQDIHSGVHENDFTGTPYVPVYVKLPAGIINKFCQLIDPEGIREELMHMKSLNVDGVVVDCWWGIVEGWSSQKYVWSGYRELFNIVRKFKLKLQVVMAFHECGGNDSSDALISLPQWVLDIGKDNQDIFFTDREGRRNTECLSWGIDKERVLKGRTGIEVYFDMMRSFRTEFDDLFAEGLIYAVEVGLGASGELKYPSFSERMGWRYPGIGEFQCYDKYLQHSLRKAAKLRGHSFWARGPDNAGHYNSMPHETGFFCERGDYDNYYGRFFLHWYSQTLIDHADNVLSLATLAFEETKIIVKVVFLVYQFFSPVVLSRSYD* 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g01979 527 Gene3D Glycosidases 216 518 - -
Phac2g01979 527 MobiDBLite consensus disorder prediction 1 27 - -
Phac2g01979 527 Pfam BES1/BZR1 plant transcription factor, N-terminal 56 202 IPR008540 -
Phac2g01979 527 PANTHER BETA-AMYLASE 1, CHLOROPLASTIC 159 511 IPR001554 GO:0000272|GO:0016161
Phac2g01979 527 Pfam Glycosyl hydrolase family 14 244 519 IPR001554 GO:0000272|GO:0016161
Phac2g01979 527 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 396 418 IPR001554 GO:0000272|GO:0016161
Phac2g01979 527 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 469 488 IPR001554 GO:0000272|GO:0016161
Phac2g01979 527 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 303 324 IPR001554 GO:0000272|GO:0016161
Phac2g01979 527 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 281 299 IPR001554 GO:0000272|GO:0016161
Phac2g01979 527 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 260 274 IPR001554 GO:0000272|GO:0016161
Phac2g01979 527 MobiDBLite consensus disorder prediction 55 72 - -
Phac2g01979 527 MobiDBLite consensus disorder prediction 1 72 - -
Phac2g01979 527 SUPERFAMILY (Trans)glycosidases 220 508 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g01979 Phac-Chr2 21820658 21828311 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g01979 14 516 Glycoside Hydrolase AT5G45300 67.043 0.0 695
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Phac2g01979 Glyco_hydro_14 1.2e-65 CL0058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g01979 K01177 - gmx:100777004 963.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac2g01979 2 21820658 21828311 Phac2g01979 2 21820658 21828311 ECH