Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g01978 ATGAAGAGCATAAACGACGACGGTTCCACGCAAGATCTCGACCCTCAGAGCGATCACAGCTCCGATTACTTAGCTCACCCTAACTCTAACCCACACCCTCACCCTCACACGCGCCGTCCGCGGGGTTTCGCGGCGGCGGCGGCGGCCACCACCAATTCCGTCGCCAAGGGAAAGAAGGAGAGAGAGAAGGAGAAGGAGCGCACCAAGCTCCGCGAGCGACACCGCCGAGCCATCACAAGCCGCATGCTCGCAGGCCTCCGCCAGTACGGCAATTTCCCCCTGCCGGCGCGTGCCGATATGAACGACGTACTCGCCGCTCTAGCGCGTGAGGCTGGTTGGGTTGTTGACGCCGATGGCACCACCTACCGCCAGTGTCCCCCTCCCTCTCACATGGGGTCGTTTGCGGCTAAATCAGTTGAAAGTCAACTCTCTGGTGGTTCTTTGAGGAATTGTTCTGTTAAGGAAACGATTGAGAACCAGACATCTGTGCTTAGGATTGATGAATGCTTGTCGCCTGCATCCATTGATTCTGTTGTAATTGCAGAAAGGGACTCAAGGAACGAGAAATATACAAATGCAAGCCCCATCAATGCTGTTGACTGCTTGGAGGCTGATCAGCTTATGCAAGATATTCATTCTGGGGTGCATGAAAATGATTTTACTGGCACACCATATGTTCCTGTTTATGTAAAGCTTCCAGCTGGTATTATTAACAAATTTTGCCAGTTGATTGATCCTGAAGGCATTAGGGAGGAGCTAATGCATATGAAGTCTTTAAATGTAGATGGTGTTGTTGTGGATTGTTGGTGGGGCATTGTTGAAGGCTGGAGCTCACAGAAATATGTGTGGTCTGGCTATAGGGAGCTTTTTAACATAGTTAGAAAGTTCAAACTGAAGTTACAGGTTGTTATGGCATTTCATGAATGTGGAGGGAATGATTCTAGTGATGCATTGATTTCCCTCCCACAATGGGTTTTGGATATTGGAAAAGACAACCAGGATATATTCTTCACAGATCGTGAAGGACGGAGGAATACCGAATGCCTTTCTTGGGGGATTGACAAAGAAAGAGTTCTCAAAGGCAGAACTGGAATTGAGGTCTATTTTGATATGATGAGAAGCTTTCGGACAGAGTTTGATGACCTGTTTGCAGAAGGTCTGATTTATGCTGTTGAAGTTGGACTTGGAGCATCCGGAGAGCTGAAATATCCTTCTTTCTCAGAAAGAATGGGATGGAGGTATCCTGGTATCGGTGAGTTTCAGTGCTATGATAAGTATCTGCAACATAGTCTGCGGAAAGCAGCCAAATTACGTGGTCACTCTTTCTGGGCTAGAGGACCTGATAATGCTGGACATTACAATTCTATGCCGCATGAAACTGGATTCTTTTGTGAGCGAGGTGATTATGACAATTACTATGGACGATTCTTCCTACATTGGTACTCCCAGACATTAATAGACCATGCAGATAATGTTTTGTCTCTTGCAACCCTTGCTTTCGAGGAGACAAAAATAATTGTTAAGGTTCCTGCTGTATACTGGTGGTACAAGACTCCTAGTCATGCAGCAGAGTTGACAGCAGGATATCACAACCCAACAAATCAGGATGGGTACTATCCTGTGTTTGAGGTTCTAAGAAAACATGCTGTCACCATGAAATTTGTCTGCTTAGGGTTTCATCTTTCCAGCCAGGAAGCTAATGAATCATTGATTGATCCAGAGGGTCTGAGTTGGCAGGTGTTAAACTCAGCTTGGGATCGTGGGTTGATGGCTGGTGGAGAGAATGCTCTCCTTTGCTATGATAGAGAAGGGTACAAGAGATTGGTTGACACGGCAAAGCCGAGAAATGATCCTGATCATCGACATTTTTCATTCTTTGTTTATCAGCAACCATCTTTGCTGCAGGCTAATGTTTGCTTGTCCGAATTGGATTTCTTCGTCAAATGCATGCATGGTGAAATGACGGATCCGTAA 1974 0.4635 MKSINDDGSTQDLDPQSDHSSDYLAHPNSNPHPHPHTRRPRGFAAAAAATTNSVAKGKKEREKEKERTKLRERHRRAITSRMLAGLRQYGNFPLPARADMNDVLAALAREAGWVVDADGTTYRQCPPPSHMGSFAAKSVESQLSGGSLRNCSVKETIENQTSVLRIDECLSPASIDSVVIAERDSRNEKYTNASPINAVDCLEADQLMQDIHSGVHENDFTGTPYVPVYVKLPAGIINKFCQLIDPEGIREELMHMKSLNVDGVVVDCWWGIVEGWSSQKYVWSGYRELFNIVRKFKLKLQVVMAFHECGGNDSSDALISLPQWVLDIGKDNQDIFFTDREGRRNTECLSWGIDKERVLKGRTGIEVYFDMMRSFRTEFDDLFAEGLIYAVEVGLGASGELKYPSFSERMGWRYPGIGEFQCYDKYLQHSLRKAAKLRGHSFWARGPDNAGHYNSMPHETGFFCERGDYDNYYGRFFLHWYSQTLIDHADNVLSLATLAFEETKIIVKVPAVYWWYKTPSHAAELTAGYHNPTNQDGYYPVFEVLRKHAVTMKFVCLGFHLSSQEANESLIDPEGLSWQVLNSAWDRGLMAGGENALLCYDREGYKRLVDTAKPRNDPDHRHFSFFVYQQPSLLQANVCLSELDFFVKCMHGEMTDP* 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g01978 657 Gene3D Glycosidases 216 656 - -
Phac2g01978 657 PANTHER BETA-AMYLASE 1, CHLOROPLASTIC 159 653 IPR001554 GO:0000272|GO:0016161
Phac2g01978 657 MobiDBLite consensus disorder prediction 1 27 - -
Phac2g01978 657 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 469 488 IPR001554 GO:0000272|GO:0016161
Phac2g01978 657 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 260 274 IPR001554 GO:0000272|GO:0016161
Phac2g01978 657 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 538 561 IPR001554 GO:0000272|GO:0016161
Phac2g01978 657 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 576 598 IPR001554 GO:0000272|GO:0016161
Phac2g01978 657 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 281 299 IPR001554 GO:0000272|GO:0016161
Phac2g01978 657 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 303 324 IPR001554 GO:0000272|GO:0016161
Phac2g01978 657 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 396 418 IPR001554 GO:0000272|GO:0016161
Phac2g01978 657 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 503 519 IPR001554 GO:0000272|GO:0016161
Phac2g01978 657 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 520 531 IPR001554 GO:0000272|GO:0016161
Phac2g01978 657 SUPERFAMILY (Trans)glycosidases 220 654 IPR017853 -
Phac2g01978 657 Pfam BES1/BZR1 plant transcription factor, N-terminal 56 202 IPR008540 -
Phac2g01978 657 MobiDBLite consensus disorder prediction 55 72 - -
Phac2g01978 657 MobiDBLite consensus disorder prediction 1 72 - -
Phac2g01978 657 Pfam Glycosyl hydrolase family 14 244 618 IPR001554 GO:0000272|GO:0016161
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g01978 Phac-Chr2 21820658 21828311 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g01978 14 656 Glycoside Hydrolase AT5G45300 66.667 0.0 894
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Phac2g01978 Glyco_hydro_14 2.9e-86 CL0058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g01978 K01177 - gmx:100777004 1258.05