Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g01970 ATGAACCAAATGAACACTTTTGTTCTCCTGTTTCCTTCCTTTTGTTCTGTAGCATGTCTTCCCATGCTTGTCCTCTTTATTATCAACTCTCTCTTGTGTGTCCCAAACACAGCTGCCTCTATATTAGGAAACCAGACCGACCATTTGGTGTTGCTCAAATTTAAGGATTCAATATCAAATGACCCTTATAAAATCATTGCATCTTGGAATAGTTCCATCCATTTTTGCAAGTGGCCTAGAGTTACATGCAATTCCAGGAATCAAAGAGTTATAGAGTTAAACCTAGAAGGAAAACAGTTGCAAGGTTCCATACCACCCCATATAGGCAATCTCTCTTTCCTAACCAGGCTTAACCTTGGAAACAACAGCTTTTATGGAAAAATTCCACAACAACTGGGTCGGTTGTTACAGTTACAAAACTTATCGCTCACCAATAACTCTTTGAATGGAGAAATACCTACAAACTTGACAAGATGTTCTAACCTTAGAGAGTTACACTTGTTTGGTAACAATTTGATTGGTAAAATACCAATGGAAATTGGCTACCTGCAAAGGCTTCAAGAATTGACCTTGGCAGTAAACAATCTAACAGGAGTAATCCCATCTTCCATAGGGAATCTTTCATCTCTCGTTTCTCTCTCAATCGGTGTCAATTACTTGGAGGGAAATATTCCACAAGAAATTTGTCTCCTCCAAAACTTGTCATTGATGTCATTGCATGTCAACAAGCTGATAGGTACATTTCCTTCTTGTCTTTTCAATATGTCATCTCTTACCATTATCTCAGCTGCAGACAATCAATTTAATGGCTCCCTTCCACCAAACATGTTCCACACCCTCCCTAATCTCCGAGAATTCCTTGTTGGTGGGAATCATATCTCAAGTTCAATCCCAACTTCCATTGCAAATGCATCTGTCCTCCAAACACTTGATGTTGGTACAAATCATTTAGTGGGCCAAGTTCCTAGTCTAGGAAAGCTGAAAAAGCTTTGGTTCCTTAGTCTGTACAGCAACAACTTAGGTAACAATACGACGAAGGACTTGGAGTTTTTAAAATCCTTAGCCAATTGTAGCGAGTTGGAAGTGGTTTCTATTTCCTATAATAATTTTGGAGGTAGTTTGCCAAATTTTATGGGAAATTTATCCACCAAGCTTAGTCAATTATATCTTGGGGGTAATCACATATCAGGAAAAATTCCTCCAGAATTAGGCAATCTAGTTAACTTAACTATCTTGACAATGGAAATTAACCATTTTGAAGGGATTGTTCCAGCCACTTTTGGGAAGTTCCAGAAGCTACAAAAGTTGGAGTTGAGTAGAAACAAGTTGACAGGAGACATTCCAGATTTTATAGGCAACCTCACTCAGTTGTATTATTTGGGCATGGCAGAAAATATGTTAGAAGGAAAGATTCCTCCAAGTATAGGAAACTGTAAAAATTTACAATACCTTAACCTTTGGAAAAACAACCTTGGAGGAAGCATACCCTTAGAGGTTTTTAGTCTTTTCTCTTTAACAAACTTACTGGATTTGTCACAAAATTCACTGAGTGGCAGGCTTCCTGATGAAGTTGGCCGCTTAAAAAATATCGGGAAGATGAGTGTGGCTGACAATAATTTGTCTGGTGAAATTCCTGAAACCATTGGAGACTGCATAAGCTTGGAGTACCTTTGTCTGCAAGGAAATTCCTTTCATGGAGCCATACCTTCCTCTTTGGCTTCACTCAAAGGTCTTCGAGTATTAGACATGTCACGAAATCTTCTGACTGGATCAATTCCTAAGGATCTACAAAGTTTTTCTTTCTTAGAATACTTCAATGTATCTTTTAACATGTTGGAGGGTGAAGTACCTCTGGAAGGTGTCTTTCAAAATGCAAGTGAGTTAGCCGTGGTTGGGAACAATAAGCTTTGTGGGGGTGTTTCACAGTTGCATCTAGCACCGTGTCCTGTCAAAAGTAAGAAACCTGAAAAACACTTGAATTTTGTTTGGATTGCAGTGATGATAGTTAGTGCGGTTTTTTTTCTTCTCGTTCTGCCATTTTTCATATCTATCTACCGGGTGAGGATAAGAAACCACAAAAAATCATCGTCTGATTTGCCAACAATTGACCAAATGCACAAGGTTTCATACCAAAACCTACATCAAGGAACCGATGGGTTTTCAGTAAAAAATTTGATAGGATCTGGAAATTTTGGATCCGTCTACAAAGGGACTATTGAGATAGAAGGAGACAAAAATGTTGTTGCCATTAAGGTTGTAAAACTTCAACAGAAGGGAGCTTCAAAGAGTTTCATTGCTGAATGTAATGCCTTGAAAAGTATTAGGCATCGAAACTTGGTCAAAACTTTAACGTGTTGCTCTAGCATAGATCACAGAGGCCAAGACTTCAAAGCTCTTGTTTTTGAGTACATGACAAATGGAAGCCTAGAAAGATGGTTGCATCCAGAAATAGAAATTGCAAAGCAGCCTGCTAGATCATTAAACCTTGACCAAAGACTAAATATTATCATTGATGTTGCTTCTGCTTTTCACTATCTTCACTACGAATGTGGGCAAGCCATTATTCACTGTGATTTGAAGCCAAATAATGTTCTTCTCGATGATTGCTTGGTAGCTCATGTAAGCGACTTTGGTTTAGCTAGAAGACTCACAACTATTGCAGTTTCTCCAAAACAAACTAGCACCATTGAAATAAAGGGCACAATTGGTTATGCTCCTCCAGAATATGGAATGGGATCAAAGGTGTCTATAGAAGGCGACGTGTACAGCTTTGGAATTCTTGTTTTGGAAATGTTAACTGGGAGAAGACCAATAGATGAAATGTTTGAAGATGGACTTAATCTCCATAACTACGTCAAAATTTCAATTCCAAACCACCTTCCCCAGATTGTGGACCCAACTATTCTTCCAAAGGGATTAAAGGTGGCTGCTAATAACCAAAATCTTCCCCCAATGCATCCTATAGTAGAGAAATGCTTACTATCACTTTTTAGGATTGCACTTGCTTGTTCAACGGAGTCGCCAAAAGAAAGAATGAGTATGGTTGATGTAATTAGGGAGCTCCATTTGATCAAAAGTTCCTTTTCATCATGA 3093 0.3851 MNQMNTFVLLFPSFCSVACLPMLVLFIINSLLCVPNTAASILGNQTDHLVLLKFKDSISNDPYKIIASWNSSIHFCKWPRVTCNSRNQRVIELNLEGKQLQGSIPPHIGNLSFLTRLNLGNNSFYGKIPQQLGRLLQLQNLSLTNNSLNGEIPTNLTRCSNLRELHLFGNNLIGKIPMEIGYLQRLQELTLAVNNLTGVIPSSIGNLSSLVSLSIGVNYLEGNIPQEICLLQNLSLMSLHVNKLIGTFPSCLFNMSSLTIISAADNQFNGSLPPNMFHTLPNLREFLVGGNHISSSIPTSIANASVLQTLDVGTNHLVGQVPSLGKLKKLWFLSLYSNNLGNNTTKDLEFLKSLANCSELEVVSISYNNFGGSLPNFMGNLSTKLSQLYLGGNHISGKIPPELGNLVNLTILTMEINHFEGIVPATFGKFQKLQKLELSRNKLTGDIPDFIGNLTQLYYLGMAENMLEGKIPPSIGNCKNLQYLNLWKNNLGGSIPLEVFSLFSLTNLLDLSQNSLSGRLPDEVGRLKNIGKMSVADNNLSGEIPETIGDCISLEYLCLQGNSFHGAIPSSLASLKGLRVLDMSRNLLTGSIPKDLQSFSFLEYFNVSFNMLEGEVPLEGVFQNASELAVVGNNKLCGGVSQLHLAPCPVKSKKPEKHLNFVWIAVMIVSAVFFLLVLPFFISIYRVRIRNHKKSSSDLPTIDQMHKVSYQNLHQGTDGFSVKNLIGSGNFGSVYKGTIEIEGDKNVVAIKVVKLQQKGASKSFIAECNALKSIRHRNLVKTLTCCSSIDHRGQDFKALVFEYMTNGSLERWLHPEIEIAKQPARSLNLDQRLNIIIDVASAFHYLHYECGQAIIHCDLKPNNVLLDDCLVAHVSDFGLARRLTTIAVSPKQTSTIEIKGTIGYAPPEYGMGSKVSIEGDVYSFGILVLEMLTGRRPIDEMFEDGLNLHNYVKISIPNHLPQIVDPTILPKGLKVAANNQNLPPMHPIVEKCLLSLFRIALACSTESPKERMSMVDVIRELHLIKSSFSS* 1031
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g01970 1030 Gene3D Transferase(Phosphotransferase) domain 1 804 1029 - -
Phac2g01970 1030 SMART LRR_typ_2 406 429 IPR003591 -
Phac2g01970 1030 SMART LRR_typ_2 502 527 IPR003591 -
Phac2g01970 1030 SMART LRR_typ_2 183 206 IPR003591 -
Phac2g01970 1030 SMART LRR_typ_2 575 598 IPR003591 -
Phac2g01970 1030 SMART LRR_typ_2 135 159 IPR003591 -
Phac2g01970 1030 SMART LRR_typ_2 255 279 IPR003591 -
Phac2g01970 1030 SMART LRR_typ_2 430 454 IPR003591 -
Phac2g01970 1030 SMART LRR_typ_2 280 304 IPR003591 -
Phac2g01970 1030 Gene3D Ribonuclease Inhibitor 341 657 IPR032675 -
Phac2g01970 1030 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 804 1030 - -
Phac2g01970 1030 ProSiteProfiles Protein kinase domain profile. 720 1023 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac2g01970 1030 PANTHER RECEPTOR-LIKE PROTEIN 55 384 1026 - -
Phac2g01970 1030 SMART serkin_6 720 1029 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac2g01970 1030 Pfam Leucine rich repeat N-terminal domain 45 84 IPR013210 -
Phac2g01970 1030 Gene3D Phosphorylase Kinase; domain 1 701 803 - -
Phac2g01970 1030 FunFam LRR receptor-like serine/threonine-protein kinase EFR 691 803 - -
Phac2g01970 1030 SUPERFAMILY L domain-like 383 638 - -
Phac2g01970 1030 Pfam Protein tyrosine and serine/threonine kinase 722 960 IPR001245 GO:0004672|GO:0006468
Phac2g01970 1030 SUPERFAMILY L domain-like 45 340 - -
Phac2g01970 1030 ProSitePatterns Serine/Threonine protein kinases active-site signature. 854 866 IPR008271 GO:0004672|GO:0006468
Phac2g01970 1030 FunFam LRR receptor-like serine/threonine-protein kinase EFR 346 654 - -
Phac2g01970 1030 SUPERFAMILY Protein kinase-like (PK-like) 693 1023 IPR011009 -
Phac2g01970 1030 Gene3D Ribonuclease Inhibitor 44 325 IPR032675 -
Phac2g01970 1030 FunFam Piriformospora indica-insensitive protein 2 176 274 - -
Phac2g01970 1030 ProSitePatterns Protein kinases ATP-binding region signature. 726 751 IPR017441 GO:0005524
Phac2g01970 1030 FunFam Leucine-rich repeat receptor-like kinase protein FLORAL ORGAN NUMBER1 46 157 - -
Phac2g01970 1030 Pfam Leucine rich repeat 408 467 IPR001611 GO:0005515
Phac2g01970 1030 Pfam Leucine rich repeat 553 612 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g01970 Phac-Chr2 21798453 21801766 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g01970 44 1028 Receptor kinase-like Gene Family AT3G47570 46.076 0.0 853
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Phac2g01970 PK_Tyr_Ser-Thr 2.3e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g01970 - - gmx:100786600 1649.03