Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g01963 ATGGTAATAGCAGAAGGAACAACGTCTGTTTCTTCTATGATCACATTTTATTCTAGCAGCCTTCGATTCCTCATCAAAATGAAGCATTTTTCTCTTCTGTTACTTGGATTTGGATCTATATCTGTTCAACTGTTTTCTCTCTTTACATTAAGCTCACTAAGTGTAGCCTTTGCATCAGGAAATGAGACTGATCATTTGGCACTTCTCCAATTCAAGAAATCTATATCCAAGGACCCAAATGGAGTCTTACTTTCTTGGAATACTTCAACTCACTTCTGTAACTGGCCTGGAATAACATGCAATCTCAAGCTTCAAAGAGTTACACAGTTAGTTTTGTCAAGGTATATGTTGGGGGGATCCATATCTCCACACATAGGAAATCTCTCTTATATGATCAACTTCAATCTAGCAACCAACAACATCCATGGAGAAATACCACATGAACTGGGACGGTTGTCACGTCTGCAACAACTATCTGTCTCAAACAACTTATTGGTAGGAGAAATTCCTACAAACTTGACTGGATGTACTCATCTCAGATTCTTATACTTAAACAAGAACAATCTAACAGGCAAAATACCAATCGAAGTTGGCTCACTTGGAAAGCTTGAAAGCTTGGCAGTTTCTGCTAACAAGTTAACAGGAGAAATCCCTTCATTCATAGGTAATCTTACCTCCCTCACTCTTCTCGATGTCAGTAGTAACAACTTTGAAGGACATATACCACAGGAAATATGCCGGCTCAAAAACTTGACATTTGCAGCATTTAATGTCAACAAGTTCACCGGAACACTTCCTTCTTGTCTTTATAATATGTCATCTCTCACCATGATCTCAGTTACAGGAAATCAATTAACTGGCCATCTTCCACCTAACATGTTCCACACACTCCCCAATCTCCAAGAACTTTACATTGCTGGCAATCAAATCTCTGGTCCAATCCCACCTTCCATCACAAATGCAACTATTTACTTCTTAGCACTGGAGGCCAGTCGAAACAGTCTCACGGGACAAATTCCAAGCATGGGAAATTTTCAGTATCTTGATATCGTATCTCTGTCTTGGAATCATCTAGGTGACAATTCAACTAATGATTTCGATTTTCTAGATTCATTGGCTAACTGTAGTAGGTTGCAACTTTTTTCCATATCCTACAATAATTTTGGTGGTCATTTGCCAGATTCTGTGGGAAATTTATCCTCCAAACTTAGTCAATTATATCTTGGAGGTAATCAGATATCAGGGAGAATTCCTGCAACAATAGGAAATTTAGTTAACTTAACTCTCTTGACTATGGAAAACAACAGCCTTGGTGGGAATATCCCAACAACTTTTGGGAAGTTTCAAAGATTGCAGAAGTTAAATTTGGGTGCAAACAAGCTGTCAGGAGAGTTAAGAACCATAGGCAACCTTACTCAATTGTTTCATTTGGAATTAGCATATAATTTGTTTGAAGGGAATATTCCTCAAAGTATAGGAAACTGCCAGAGGTTACAGTACTTAGACCTTTCACATAACAACTTTACAGGAACCATACCCTTGGACCTTTTTAAGCTTTCATCTCTAACAAAATTGTTGGATTTGTCACTAAACTCATTGAGTGGCAGTGTACCTGAAGAAGTAGGCAGCCTAAAAAATCTTGGTTGGCTAGATATGTCTGAGAATCACATGTCCGGGGAAATTCCTCCAACAATGGGAGAATGCATAATGTTGGAATACCTGTATTTACAAGGGAATTCTTTACAAGGAATCATTCCATCATCTTTGGCATCACTCAAAGGGCTTCTACGTTTAGACCTGTCACGAAATCAATTGTCTGGATCAATTCCTAATACTCTACAAAGCATTTCTTCCTTACAGTATTTCAATGTATCCTTTAACAAATTGGAGGGTGAAGTACCAACCTTTGGAAATGCAAGTGAGATATTGGTTATGGGAAACAATAAACTTTGTGGGGGAACTTCAGAGCTGCATCTACCAACGTGCCCCGTCAAAGGTAAGAAACTTGCAAAACACCACAAGTTCAGGTTGATAGCAGTGATAGTTAGTGTGATTACTTTTCTTCTCATATTGTCAATTACTCTAACTATTTACTGGACAAGGAAAAGGAGTAAGAAAACATCTTTGGATTCACCAGCAAATGATGATCAGTCGGCTACAGTTTCGTACCAAAGCCTGCACAATGGAACTGATGGGTTCTTAGCTACAAACTTGATAGGGTCTGGACACTTTAGCTCGGTTTACAAAGGAACTCTTGAGGAGTTAGATGAAAAAGTTGTTGCCATAAAGGTCCTAAACCTTCAGAAAAAGGGAGCTCATAAGAGTTTTATTTCAGAATGCAACGCACTTAGAAATATCAAACATCGAAATCTGATTCAGGTTTTGACATGTTGTTCCAGCATAGATTACAAAGGTCAAGAATTCAAAGCTCTAATTTTTCCCTACATGACAAATGGAAGCTTAGAGCAATGGCTGCATCCTAAGACACTAAGCGAAGAGGATCCGAGAAAATTGAGCCTTGATCAAAGATTAAATATCATGGTTGATGTTGCTTCTGCATTACATTATCTTCATCATGAATGTGAGCAACCAATAATTCATTGTGATTTAAAGCCAAGTAATGTCCTCCTCGACAATGAGATGGTTGCTCATGTGAGTGATTTTGGCATATCAAAACTTCTCTCAGCCCTCAATGATAACACTTCTAAACAAACAAGTACAATTGGAATAAAGGGTACTCTTGGCTATGTTCCTCCAGAGTATGGAGTGAGTTCTGAAGTATCAACATACGGTGACATATACAGCTTTGGGATTCTTATGTTGGAAATGCTTACAGGAAAAAGTCCCACAGATGAAATGTTTGAAGATGGTCAAAATCTTCATAACTTTGTTCTAACTTCATTTCCTGATAATCTTTTGCAAATTTTGGATCCACTACTTATTCCAACAGATGAATCACCACCATTGAAAGGAAACAATTGGAATCCTGATCCAAATGTTGAGATGTGCTTAGTGTCCCTTTTTAGGATTGGACTTGCTTGTTCTATGAAATCACCAAAAGATAGAATGAATATTGCTCATGTCACTAGGGAGCTTAACAGAATCAGAGAGGTCTTTCTTGCTGGTGAGTGA 3132 0.3815 MVIAEGTTSVSSMITFYSSSLRFLIKMKHFSLLLLGFGSISVQLFSLFTLSSLSVAFASGNETDHLALLQFKKSISKDPNGVLLSWNTSTHFCNWPGITCNLKLQRVTQLVLSRYMLGGSISPHIGNLSYMINFNLATNNIHGEIPHELGRLSRLQQLSVSNNLLVGEIPTNLTGCTHLRFLYLNKNNLTGKIPIEVGSLGKLESLAVSANKLTGEIPSFIGNLTSLTLLDVSSNNFEGHIPQEICRLKNLTFAAFNVNKFTGTLPSCLYNMSSLTMISVTGNQLTGHLPPNMFHTLPNLQELYIAGNQISGPIPPSITNATIYFLALEASRNSLTGQIPSMGNFQYLDIVSLSWNHLGDNSTNDFDFLDSLANCSRLQLFSISYNNFGGHLPDSVGNLSSKLSQLYLGGNQISGRIPATIGNLVNLTLLTMENNSLGGNIPTTFGKFQRLQKLNLGANKLSGELRTIGNLTQLFHLELAYNLFEGNIPQSIGNCQRLQYLDLSHNNFTGTIPLDLFKLSSLTKLLDLSLNSLSGSVPEEVGSLKNLGWLDMSENHMSGEIPPTMGECIMLEYLYLQGNSLQGIIPSSLASLKGLLRLDLSRNQLSGSIPNTLQSISSLQYFNVSFNKLEGEVPTFGNASEILVMGNNKLCGGTSELHLPTCPVKGKKLAKHHKFRLIAVIVSVITFLLILSITLTIYWTRKRSKKTSLDSPANDDQSATVSYQSLHNGTDGFLATNLIGSGHFSSVYKGTLEELDEKVVAIKVLNLQKKGAHKSFISECNALRNIKHRNLIQVLTCCSSIDYKGQEFKALIFPYMTNGSLEQWLHPKTLSEEDPRKLSLDQRLNIMVDVASALHYLHHECEQPIIHCDLKPSNVLLDNEMVAHVSDFGISKLLSALNDNTSKQTSTIGIKGTLGYVPPEYGVSSEVSTYGDIYSFGILMLEMLTGKSPTDEMFEDGQNLHNFVLTSFPDNLLQILDPLLIPTDESPPLKGNNWNPDPNVEMCLVSLFRIGLACSMKSPKDRMNIAHVTRELNRIREVFLAGE* 1044
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g01963 1043 SMART serkin_6 733 1039 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac2g01963 1043 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 816 1043 - -
Phac2g01963 1043 Gene3D Transferase(Phosphotransferase) domain 1 816 1039 - -
Phac2g01963 1043 Gene3D Ribonuclease Inhibitor 175 250 IPR032675 -
Phac2g01963 1043 Gene3D Phosphorylase Kinase; domain 1 713 815 - -
Phac2g01963 1043 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 101 366 - -
Phac2g01963 1043 Pfam Protein kinase domain 737 957 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac2g01963 1043 ProSitePatterns Protein kinases ATP-binding region signature. 739 763 IPR017441 GO:0005524
Phac2g01963 1043 Pfam Leucine rich repeat 259 310 IPR001611 GO:0005515
Phac2g01963 1043 Pfam Leucine rich repeat 571 629 IPR001611 GO:0005515
Phac2g01963 1043 Pfam Leucine rich repeat 497 556 IPR001611 GO:0005515
Phac2g01963 1043 SMART LRR_typ_2 424 447 IPR003591 -
Phac2g01963 1043 SMART LRR_typ_2 496 519 IPR003591 -
Phac2g01963 1043 SMART LRR_typ_2 471 495 IPR003591 -
Phac2g01963 1043 SMART LRR_typ_2 152 176 IPR003591 -
Phac2g01963 1043 SMART LRR_typ_2 544 568 IPR003591 -
Phac2g01963 1043 SMART LRR_typ_2 224 248 IPR003591 -
Phac2g01963 1043 SMART LRR_typ_2 297 321 IPR003591 -
Phac2g01963 1043 SMART LRR_typ_2 592 615 IPR003591 -
Phac2g01963 1043 SMART LRR_typ_2 272 296 IPR003591 -
Phac2g01963 1043 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 371 1034 - -
Phac2g01963 1043 ProSitePatterns Serine/Threonine protein kinases active-site signature. 865 877 IPR008271 GO:0004672|GO:0006468
Phac2g01963 1043 ProSiteProfiles Protein kinase domain profile. 733 1040 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac2g01963 1043 FunFam LRR receptor-like serine/threonine-protein kinase EFR 367 668 - -
Phac2g01963 1043 Gene3D Ribonuclease Inhibitor 63 174 IPR032675 -
Phac2g01963 1043 Gene3D Ribonuclease Inhibitor 251 326 IPR032675 -
Phac2g01963 1043 SUPERFAMILY Protein kinase-like (PK-like) 711 1032 IPR011009 -
Phac2g01963 1043 Gene3D Ribonuclease Inhibitor 328 670 IPR032675 -
Phac2g01963 1043 Pfam Leucine rich repeat N-terminal domain 62 101 IPR013210 -
Phac2g01963 1043 FunFam LRR receptor-like serine/threonine-protein kinase EFR 704 815 - -
Phac2g01963 1043 SUPERFAMILY L domain-like 328 644 - -
Phac2g01963 1043 SUPERFAMILY L domain-like 61 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g01963 Phac-Chr2 21768849 21772214 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g01963 61 1040 Receptor kinase-like Gene Family AT3G47570 44.869 0.0 821
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Phac2g01963 Pkinase 1.7e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g01963 - - gmx:102664380 1497.26