LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phac2g01950	ATGGAACTAAGCACTATCTTATGCTTGTGTGCTTCCTTTCTCTTCATTTTTCTCTTCAGGACACTCATCAAACAGTTTCTCACCAAACGCCCTCACTTCCCACTCCCACCTGGCACCATGGGTTGGCCTTATATAGGAGAAACCTTTCAAATGTATTCTCAAGACCCAAATGTCTTCTTTGCCTCCAAAATTAAAAGGTATGGCTCTATGTTCAAGTCCCACATTCTAGGATGTCCCTGTGTGATGATTTCCAGCCCCGAGGCTGCCAAGTTTGTGCTCAACAAAGCTCAACTCTTCAAGCCAACATTCCCAGCTAGCAAAGAGAGGATGTTGGGAAAACAAGCTATCTTCTTTCACCAAGGAGAGTACCATGCTAACTTGAGAAGGCTTGTTCTTCGCACCTTCATGCCTGAAGCCATCAAAAACATCGTACCTGACATTGAATCCATTGCTCAAGATTGCTTAAAATCCTGGGAGGGCCGTTTGATCACCACTTTCCTTGAAATGAAAACGTTCACCTTCAACGTTGCTCTGCTTTCAATTTTCGGGAAAGAAGAGATTCTGTACAGAGATGCTCTGAAACGGTGTTACTACACTCTGGAGCAAGGGTACAACTCAATGCCCATTAACGTTCCGGGGACACTGTTCCACAAGGCGATGAAAGCGAGGAAGGAGCTTGCGCAGATCGTGGCCCAAATAATCTCTAGCAGGAGGCAGAGGAAACAGGATTACAAGGACTTGTTGGGTTCATTCATGGGAGAGAAAGCAGGGCTCACCGACGAGCAGATAGCAGATAATGTAATTGGAGTCATTTTTGCAGCTCGTGATACCACTGCCAGTGTGCTGACGTGGATTGTCAAGTACCTTGGTGAAAACCCCAGTGTCCTAGAAGCTGTTACTGAAGAGCAAGAGTGCATATTGAAGACCAAGGAAGAAAGTGGAGAGGATAAGGGTCTGAATTGGGAAGATACCAAAAAGATGCCCATAACTTCAAGGGTTATTCAGGAAACTCTAAGAGTTGCTTCAATTTTGTCTTTTACTTTCAGAGAAGCAGTAGAGGATGTTGAATATCAAGGATATCTTATACCAAAAGGGTGGAAAGTGCTACCTCTATTTAGGAACATACACCACAGTCCTGACAACTTCAAGGAACCAGAAAAATTTGATCCCTCAAGATTTGAGGCTGCACCAAAACCCAATTCTTTTATGCCATTTGGCAGTGGGATCCACGCTTGTCCAGGGAATGAATTAGCCAAGTTGGAGATTTTGGTCCTCCTACATCATCTCACCACAAAGTTCAGGTTGGTAAAACTTACTCACAGTGTCTCCTTGCAACCATTTTTTAGCCATATGCTTTGGATGGAAACACATTCCAAATTAAGGGTGTTTAGAATGTTTCTAAAGTGTTGCTTCTATTTTTCTGGCGCAGGTGGTCTGTTGTGGGTGCAAAGAATGGGATTCAATATGGCCCTTTTGCTCTTCCCCAAAATGGTTTACCCATCACACTATATCCCAAGAAGTAGATACTAA	1530	0.4373	MELSTILCLCASFLFIFLFRTLIKQFLTKRPHFPLPPGTMGWPYIGETFQMYSQDPNVFFASKIKRYGSMFKSHILGCPCVMISSPEAAKFVLNKAQLFKPTFPASKERMLGKQAIFFHQGEYHANLRRLVLRTFMPEAIKNIVPDIESIAQDCLKSWEGRLITTFLEMKTFTFNVALLSIFGKEEILYRDALKRCYYTLEQGYNSMPINVPGTLFHKAMKARKELAQIVAQIISSRRQRKQDYKDLLGSFMGEKAGLTDEQIADNVIGVIFAARDTTASVLTWIVKYLGENPSVLEAVTEEQECILKTKEESGEDKGLNWEDTKKMPITSRVIQETLRVASILSFTFREAVEDVEYQGYLIPKGWKVLPLFRNIHHSPDNFKEPEKFDPSRFEAAPKPNSFMPFGSGIHACPGNELAKLEILVLLHHLTTKFRLVKLTHSVSLQPFFSHMLWMETHSKLRVFRMFLKCCFYFSGAGGLLWVQRMGFNMALLLFPKMVYPSHYIPRSRY*	510

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phac2g01950	509	ProSitePatterns	Cytochrome P450 cysteine heme-iron ligand signature.	405	414	IPR017972	GO:0005506\|GO:0016705
	Phac2g01950	509	PRINTS	P450 superfamily signature	332	343	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Phac2g01950	509	PRINTS	P450 superfamily signature	403	412	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Phac2g01950	509	PRINTS	P450 superfamily signature	412	423	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Phac2g01950	509	PRINTS	P450 superfamily signature	273	290	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Phac2g01950	509	Gene3D	Cytochrome P450	26	460	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Phac2g01950	509	FunFam	Abscisic acid 8	25	453	-	-
	Phac2g01950	509	CDD	CYP90-like	64	449	-	-
	Phac2g01950	509	PRINTS	E-class P450 group I signature	262	279	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Phac2g01950	509	PRINTS	E-class P450 group I signature	412	435	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Phac2g01950	Phac-Chr2	21610022	21613273	Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Phac2g01950	1	438	Cytochrome P450	AT4G19230	74.773	0.0	693

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Phac2g01950	K09843		-	gmx:100170674	831.632

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