Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g01934 ATGCCACAGAACTGCATAGCACCAAAACCAGAATACTGTAATAGTCATCACTCTGTAGAAGGACCCCCAGAGATGACTGAGCCCCATAACTCAACTGTCCTTTCTCATCCCATGCAAACCAATGAACAACAACAACCTTTTCCAAAACTCATTATGTACCCAATAACTCTGAAGTTTGAGGAACTGGTGTACAAAGTTAAACTAGAGCAGAAGGGAGGATGCTGGGGCAGTACATGGACTTGCAAGGAGAAGACCATACTGAACGGAATCACTGGTGTGGTGTGTCCAGGAGAAATACTAGCCATGTTGGGGCCATCAGGTAGTGGCAAAACCACACTTCTCACAGCACTTGGAGGCCGGCTCAGCGGCAAACTATCTGGTAAGATCACGTACAACGGCCAACCTTTCTCTGGTGCCATGAAGAGAAGAACAGGTTTTGTGGCTCAGGATGATGTGCTATACCCTCACCTAACTGTAACTGAAACTCTAGTGTTCACTGCACTTCTAAGGCTTCCCAACAGTTTGACCAGAGATGAAAAAGTTCAGCATGTAGAGAGAGTGATCACTGAGCTAGGACTGACTCGTTGCAGGAGCAGCATGATAGGTGGCCCACTTTTTAGGGGAATATCAGGTGGAGAAAAAAAGAGAGTGAGCATAGGACAAGAAATGCTCATCAACCCAAGCCTCCTGTTGCTGGATGAGCCTACTTCAGGCTTGGATTCCACCACAGCACAAAGAATCCTCAACACAATCAAGCGCCTAGCTAGTGGGGGTAGAACTGTTGTCACCACTATTCACCAACCCTCTAGTAGGCTCTACTATATGTTTGATAAGGTGGTCTTGCTCTCTGAAGGCTGCCCCATCTATTATGGTCCTGCTTCAACTGCCTTGGACTACTTCTCTTCTGTTGGCTTTTCCACATGTGTGACTGTCAATCCAGCTGATCTCTTGCTTGATCTTGCCAACGGGATTGCCCCAGACTCCAAGCAAGCAGCTGAACAAAATGAAGGACTGGAACAAGAGAGGAAACAGGTGAGGGAATCTCTCATCTCTGCTTATGAGAAGAATATAGCTACGAGGCTGAAAGCTGAGGTTTGCAGCCTGGAAGTGAACAACCACAATATCACAAAAGATGCTTGTGCAAGAAATTCGATAAAGCCAGAACAATGGAGCACGAGCTGGTGGCATCAGTTCAAAGTACTATTACAAAGGGGAGTGAAGGAGCGAAGGTATGAAGCCTTCAACAGGCTGAGAATATTCCAAGTTGTAAGTGTCGCTTTTCTTGGTGGACTACTGTGGTGGCATACTCCGGAGTCACACATTGAAGATCGGGTAAGTAGGAATTGCTTCAATTTATCTTTTCCAGTTGATGATATTGACAGCCAATTAATAACAAATAAAAAAGTTATGGTAACATATATGATTAGGCCTTTAATCTGA 1440 0.4528 MPQNCIAPKPEYCNSHHSVEGPPEMTEPHNSTVLSHPMQTNEQQQPFPKLIMYPITLKFEELVYKVKLEQKGGCWGSTWTCKEKTILNGITGVVCPGEILAMLGPSGSGKTTLLTALGGRLSGKLSGKITYNGQPFSGAMKRRTGFVAQDDVLYPHLTVTETLVFTALLRLPNSLTRDEKVQHVERVITELGLTRCRSSMIGGPLFRGISGGEKKRVSIGQEMLINPSLLLLDEPTSGLDSTTAQRILNTIKRLASGGRTVVTTIHQPSSRLYYMFDKVVLLSEGCPIYYGPASTALDYFSSVGFSTCVTVNPADLLLDLANGIAPDSKQAAEQNEGLEQERKQVRESLISAYEKNIATRLKAEVCSLEVNNHNITKDACARNSIKPEQWSTSWWHQFKVLLQRGVKERRYEAFNRLRIFQVVSVAFLGGLLWWHTPESHIEDRVSRNCFNLSFPVDDIDSQLITNKKVMVTYMIRPLI* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g01934 479 Pfam ABC transporter 88 237 IPR003439 GO:0005524
Phac2g01934 479 CDD ABCG_EPDR 54 291 - -
Phac2g01934 479 SMART AAA_5 96 286 IPR003593 GO:0016887
Phac2g01934 479 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 57 309 IPR003439 GO:0005524
Phac2g01934 479 FunFam ABC transporter G family member 22 74 303 - -
Phac2g01934 479 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 27 446 - -
Phac2g01934 479 ProSitePatterns ABC transporters family signature. 209 223 IPR017871 GO:0005524|GO:0016887
Phac2g01934 479 Pfam ABC-2 type transporter 266 390 IPR043926 GO:0140359
Phac2g01934 479 Coils Coil 328 355 - -
Phac2g01934 479 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 79 301 IPR027417 -
Phac2g01934 479 Gene3D - 76 303 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g01934 Phac-Chr2 21478977 21482602 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g01934 86 285 Calmodulin-binding Proteins AT2G36910 30.000 2.74e-13 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g01934 K05681 - gmx:100780191 865.144