Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g01891 ATGAGTGATGCAAAAGAACACGAAGAGGCTGGCCAGGGCAAGCCCTCGGTCGTGGAAGAGAACAAGCTGTTGGTTGATACAAAGGATCGAGTTCAGCCTGAAGCTGTCTCTGCTCCTGTTCCAGTAGAGGAAACGTCAAACCTTGTTGAAAATGGGTCAAATCATGTTGAGAGTGGGTCAAATCTTGCTGAAAATAAGAAGGAAGAGCCACTTGCTGAGCATAAAAATGTGCAACTTGAGGTTGTTTCAGAAGGAATTCCACAAGAGGATGTTCAAAATACTCTTCACTCTGTCCCAGCAGAGGCTCATACTCAGGTTTTGAATACGACTGAGTGTGAAGAAGCTTCTAAAGCGAAGGGGGAAGCTGAAGAATTTCCCGCGATTAATAAAAAGGTTGAGAATAGTAATGATATTTGTCAGAATAGTATTGATGATGTTGAAATGGCTGTGGAAGTGAAGCCTGAAGGCTGTGAAGTGGTTGACAGTAAAACTTGCGACAATGGTGACCCAATGCCTGCAAGTCATAATGAACTTGCTATATCACAACCTGCTCCTACTGATACAAACACTGAATTTGTGAATGTATTAGAAGTTGAGAATAAGGCTGATGAAAAGCAAGCTACCGATCCTGCTGATAACGGGAATTCAAACTCTAAGCACTTGTTTTTCTTGGATGCTGACCATTCCTATGATGGTAATGAGTCAGGAACCGAGGAGGAGCAGTCAGCATTTATGAAGGAGCTTGAAAACTTCTTTAGGGAGAGGAGCTTGGAATTCAAACATCCTAAGTTTTATGGAGAAGGACTAAATTGCCTTAAGTTGTGGAGAGCTGTAACGAGATTGGGTGGCTATGATAAGGTGACTTCATGTAAGTTATGGCGGCAAGTGGGAGAGTCTTTCAAACCTCCAAAGACATGCACCACTGTCTCATGGACCTTCCGGGGATTTTATGAGAAGGCACTTCTTGATTATGAAAGACATAAAATAAAAGGTGGTGAGCTAAATGTGCCGATTTCTTCTCTCCCAGAGCCTATAAATATTGAAAATCAGGCTTCAGCATCAGGTAGAGCCCGGAGAGATGCTGCAGCACGGGCTATGCAGGGTTGGCACTCACAACGTCTCCTAGGGAATGGTGAAGTCAGTGACCCCATTATTAAGGATAGGAATTCCGTGTCTGTGCAAAAGCGTGAGAAGCAGCTTAAAAGCATCAATTTGCACAAACGTAAAAAACCATCTTCACCTTACATGGATAATGCAGTCAAAGCTGCACGCAGTAAACCTTCTAAACCACAATTGGACACTACTGTGATTGATATAGGACCTCCTGCTGACTGGGTAAAAGTCAATGTACAAAAAACTAAAGATTGTTTTGAGGTATATGCTTTAGTTCCTGGCCTTCTGCGGGAAGAGGTTCGTGTGCAGTCAGACCCAGCAGGACGCCTAGTCATAAGTGGTGAGCCTGAGCATCCCAACAATCCTTGGGGTGTAACTCCTTTCAAAAAGGTCGTCAGCTTGCCCTCAAGAATTGATCCTCATCAGACGTCGGCGGTGGTGACTCTGCATGGGCAGTTGTTTGTTCGTGTACCATTTGAACAGTCAGAATAG 1605 0.4399 MSDAKEHEEAGQGKPSVVEENKLLVDTKDRVQPEAVSAPVPVEETSNLVENGSNHVESGSNLAENKKEEPLAEHKNVQLEVVSEGIPQEDVQNTLHSVPAEAHTQVLNTTECEEASKAKGEAEEFPAINKKVENSNDICQNSIDDVEMAVEVKPEGCEVVDSKTCDNGDPMPASHNELAISQPAPTDTNTEFVNVLEVENKADEKQATDPADNGNSNSKHLFFLDADHSYDGNESGTEEEQSAFMKELENFFRERSLEFKHPKFYGEGLNCLKLWRAVTRLGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKIKGGELNVPISSLPEPINIENQASASGRARRDAAARAMQGWHSQRLLGNGEVSDPIIKDRNSVSVQKREKQLKSINLHKRKKPSSPYMDNAVKAARSKPSKPQLDTTVIDIGPPADWVKVNVQKTKDCFEVYALVPGLLREEVRVQSDPAGRLVISGEPEHPNNPWGVTPFKKVVSLPSRIDPHQTSAVVTLHGQLFVRVPFEQSE* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g01891 534 Coils Coil 530 534 - -
Phac2g01891 534 FunFam AT-rich interactive domain-containing protein 3 426 534 - -
Phac2g01891 534 MobiDBLite consensus disorder prediction 1 29 - -
Phac2g01891 534 FunFam AT-rich interactive domain-containing protein 3 238 337 - -
Phac2g01891 534 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 434 534 IPR002068 -
Phac2g01891 534 SUPERFAMILY ARID-like 233 339 IPR036431 GO:0003677
Phac2g01891 534 Gene3D - 436 534 IPR008978 -
Phac2g01891 534 SMART bright_3 239 330 IPR001606 GO:0003677
Phac2g01891 534 ProSiteProfiles ARID domain profile. 238 329 IPR001606 GO:0003677
Phac2g01891 534 MobiDBLite consensus disorder prediction 406 435 - -
Phac2g01891 534 SUPERFAMILY HSP20-like chaperones 443 530 IPR008978 -
Phac2g01891 534 MobiDBLite consensus disorder prediction 1 65 - -
Phac2g01891 534 CDD ARID 240 325 - -
Phac2g01891 534 Pfam Hsp20/alpha crystallin family 451 533 IPR002068 -
Phac2g01891 534 Gene3D - 238 335 IPR036431 GO:0003677
Phac2g01891 534 SMART ARID_2 235 325 - -
Phac2g01891 534 MobiDBLite consensus disorder prediction 44 60 - -
Phac2g01891 534 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN ARID DOMAIN- CONTAINING PROTEIN DEAD RINGER PROTEIN B-CELL REGULATOR OF IGH TRANSCRIPTION BRIGHT 81 533 IPR045147 GO:0006357
Phac2g01891 534 CDD ACD_sHsps-like 449 529 - -
Phac2g01891 534 Pfam ARID/BRIGHT DNA binding domain 241 325 IPR001606 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g01891 Phac-Chr2 20996778 21003723 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g01891 222 532 ARID Transcription Factor Family AT1G76510 63.291 1.22e-130 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Phac2g01891 HSP20 1.5e-05 CL0190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g01891 - - gmx:100791081 888.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac2g01891 2 20996778 21003723 Phac2g01891 2 20996778 21003723 ECH